LOC120552583


Basic Information

Item Value
gene id LOC120552583
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 29300690 ~ 29319934 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU303066
AGATTGAGGAGCTGCagtttgtcagagatcagcGGCGCTGTTCTGGCCTCAcctctgaagtccaacccctcccatctgagagagctggacctgaagGACAACAACATGAAGGATTCAGACCTGAAGCATCTGTGTGATCTGAAGGAGAGTCCAGACTGTAGACTGGAGACAATGAAATTGAGGAGCTGCagtttgtcagagatcagctgtgctgCTCTGGCCTCAcctctgaagtccaacccctcccatctgagagagctggacctgaagGACAACATGAAAGATTCAGACGTGAAGCAGCTGTGTGATCTGAAGGAGAGTCCAGACTGTAGACTGGATACACTTGAATGTTGTCAGAGTGATCAGAAAGTTTGATGTGTTGACACCTGATGTGGAGTCCTCCATCATCCCTCTGTGTTCCTGACaagccagggaaattcaaaggtagcgttaTCAAACTGGAAGCAATACTTCttgctcattgaaattaaaggcaagaatgtttatgtaacatgcacgctatgcccaggaaaaaaaagtcacagttatTTTTCTGAGTAacaaattacttttataatgtggtaactgagttactaactcaattactttttgggagaagtaatttgtaactgtaactaattacttttttaaagtaagatgaccaacacttaAGTAAGTTAAGAAAAtagtttgccagattggatgtctagACTAGAAAATGGAGAAAGTATTTGAACTTTCTGGAGGtctcctaagaagctttgtgctggggagagactTGTATGAagggc
>XM_039790764.1
TGCAGCGTGTTCAAACATTTCTCCAGCGGAGCtgatcagagagagaggagtgtgtTTGAGTGCTGGCTCTCATAGAGGTCTATTTGAAAATGGCCCACTCACTTTTGTACTGGCCCGCCCAAAATACTATTTCAGTCTACAGAGCAGGGCGAGGAAACTGAAGGCTGAGGCAGTtcAGTGTTCCTGTTTTACCTCTCAGACTAACTTCAGATCAGAAGATGAGTgatttggaggaagaggagtatGGACCAGAGTCTGTAGTATCTAGCTGTCAGTCAGTGAAGAGTGACTGGTCCATAGATCTACCTCTATACTTCAGTGATGAATCtggaccctcagacacaaaACTGACTCCGGATCAGAAGATGAGTgatttggaggaagaggaggacagagCAGAGTCTGAAGGATCTGGCTGTCAGTCTACGAAGAGTGACCGGTCCAAAGGTCTTCCTGGAGACTTCAGTAATgaacctggaccctcagacacaaaACTGACTTCAGATCAGAAGATGAGTGATGTCGAGGTAGAGGAGGACGGAGCAGAGTCTGAAGGATCTGACTGTCAGTCTACGAAGAGTGACCAGTCCAAAGGTATTCCTGAAGACTTCAGTAATGAACCTGGACCATCAGGCACCAAattgCGGTGGTGCagtttgtcagagatcagctgtgcttctctggCCTCATCTCTGAAGTctaacccctcccatctgagagagctggagctGAATGGAAACGAGTTGCAGAATTCAAAATTGAAGCAGCTTTGTAGTTTTCTGGAGATTCCACACTGTCGACTGAAGTCTCTAAGATTGAGGAGCTGCagtttgtcagagatcagcGGCGCTGTTCTGGCCTCAcctctgaagtccaacccctcccatctgagagagctggacctgaagGACAACAACATGAAGGATTCAGACCTGAAGCATCTGTGTGATCTGAAGGAGAGTCCAGACTGTAGACTGGAGACAATGAAATTGAGGAGCTGCagtttgtcagagatcagctgtgctgCTCTGGCCTCAcctctgaagtccaacccctcccatctgagagagctggacctgaagGACAACATGAAAGATTCAGACGTGAAGCAGCTGTGTGATCTGAAGGAGAGTCCAGACTGTAGACTGGATACACTTGAATGTTGTCAGAGTGATCAGAAAGTTTGATGTGTTGACACCTGATGTGGAGTCCTCCATCATCCCTCTGTGTTCCTGACaagccagggaaattcaaaggtagcgttaTCAAACTGGAAGCAATACTTCttgctcattgaaattaaaggcaagaatgtttatgtaacatgcacgctatgcccaggaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU303066 False 791 TUCP 0.43 3 29300690 29305614
XM_039790764.1 True 1349 mRNA 0.48 9 29300944 29319934

Neighbor

gene id symbol gene type direction distance location
LOC120552587 hus1 coding downstream 138719 29151434 ~ 29161971 (-)
LOC120552571 NA coding downstream 153029 29125214 ~ 29147661 (-)
LOC120552600 NA coding downstream 188397 28377079 ~ 29112293 (-)
dnah5l LOC103377303,LOC103367559 coding downstream 206485 28930231 ~ 29094205 (-)
LOC120552567 NA coding downstream 945043 28303334 ~ 28355647 (-)
dnph1 NA coding upstream 283168 29603102 ~ 29610341 (-)
LOC120552739 NA coding upstream 309371 29629305 ~ 29672772 (-)
inhbaa inhba,LOC104934797,LOC102293179,LOC101479519 coding upstream 426574 29746508 ~ 29750259 (-)
eci2 eci2 coding upstream 541868 29861802 ~ 29895595 (-)
LOC120552613 NA coding upstream 580476 29900410 ~ 29924741 (-)
G223852 NA non-coding downstream 133013 29164646 ~ 29167677 (-)
G223851 NA non-coding downstream 135690 29163956 ~ 29165000 (-)
G223847 NA non-coding downstream 155039 29142928 ~ 29145651 (-)
G223808 NA non-coding downstream 372179 28908041 ~ 28928511 (-)
G223700 NA non-coding downstream 398259 28862375 ~ 28902431 (-)
G223870 LOC107105063 non-coding upstream 18319 29338253 ~ 29339662 (-)
G223873 NA non-coding upstream 28640 29348574 ~ 29354881 (-)
G223876 NA non-coding upstream 36685 29356619 ~ 29357892 (-)
LOC120552609 NA non-coding upstream 140741 29460675 ~ 29534359 (-)
G223821 NA non-coding upstream 155310 29475244 ~ 29538617 (-)
LOC120552566 NA other downstream 454437 28781890 ~ 28846253 (-)
G223686 LOC100697526 other downstream 782764 28011028 ~ 28517926 (-)
G223746 NA other downstream 1105265 28176365 ~ 28195425 (-)
G223681 NA other downstream 1384857 27897134 ~ 27915833 (-)
G223646 fars2,LOC102791206 other downstream 1504839 27756346 ~ 27795851 (-)
LOC120552608 NA other upstream 159875 29479809 ~ 29543351 (-)
G223911 NA other upstream 230461 29550395 ~ 29563368 (-)
LOC120552738 yipf3,LOC106605823 other upstream 292058 29611992 ~ 29620659 (-)
G223897 NA other upstream 392080 29712014 ~ 29746456 (-)
LOC120552628 NA other upstream 530722 29850656 ~ 29856972 (-)

Expression


Co-expression Network