G223852



Basic Information


Item Value
gene id G223852
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 29164646 ~ 29167677 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU303090
CGTTGATTCTGTCCAGCTGGAGAGACGAGTCTCCCACGTAGGTCCCTGCCGGGTCGATGGCGTGCTCGTCGCTGATCACCTCCCAGAACTTGGTCCCGATCTGGTTCCCACACTGTCCCGCCTGGATGTGAACTATTTCTCTCATCTTTCTCCCTTCTGTCGCTCTTTCTCCGGCTGCTGGTCTGGTTGAGTGTCTCTCGTCCtgctgtcggtgtgtgtgtgtgtgtgtggtgtgtgtgtgtgtgtgtgtcagaggtcctcttctcttcctcctctc

Function


GO: NA

KEGG:

id description
ko00830 Retinol metabolism
ko04977 Vitamin digestion and absorption

RNA


RNA id representative length rna type GC content exon number start site end site
TU303090 True 277 lncRNA 0.57 2 29164646 29167677

Neighbor


gene id symbol gene type direction distance location
LOC120552587 hus1 coding downstream 2675 29151434 ~ 29161971 (-)
LOC120552571 NA coding downstream 16985 29125214 ~ 29147661 (-)
LOC120552600 NA coding downstream 52353 28377079 ~ 29112293 (-)
dnah5l LOC103377303,LOC103367559 coding downstream 70441 28930231 ~ 29094205 (-)
LOC120552567 NA coding downstream 808999 28303334 ~ 28355647 (-)
dnph1 NA coding upstream 435425 29603102 ~ 29610341 (-)
LOC120552739 NA coding upstream 461628 29629305 ~ 29672772 (-)
inhbaa inhba,LOC104934797,LOC102293179,LOC101479519 coding upstream 578831 29746508 ~ 29750259 (-)
eci2 eci2 coding upstream 694125 29861802 ~ 29895595 (-)
LOC120552613 NA coding upstream 732733 29900410 ~ 29924741 (-)
G223847 NA non-coding downstream 18995 29142928 ~ 29145651 (-)
G223808 NA non-coding downstream 236135 28908041 ~ 28928511 (-)
G223700 NA non-coding downstream 262215 28862375 ~ 28902431 (-)
G223798 NA non-coding downstream 311796 28850663 ~ 28852850 (-)
G223692 NA non-coding downstream 390399 28708699 ~ 28774247 (-)
G223870 LOC107105063 non-coding upstream 170576 29338253 ~ 29339662 (-)
G223873 NA non-coding upstream 180897 29348574 ~ 29354881 (-)
G223876 NA non-coding upstream 188942 29356619 ~ 29357892 (-)
LOC120552609 NA non-coding upstream 292998 29460675 ~ 29534359 (-)
G223821 NA non-coding upstream 307567 29475244 ~ 29538617 (-)
LOC120552566 NA other downstream 318393 28781890 ~ 28846253 (-)
G223686 LOC100697526 other downstream 646720 28011028 ~ 28517926 (-)
G223746 NA other downstream 969221 28176365 ~ 28195425 (-)
G223681 NA other downstream 1248813 27897134 ~ 27915833 (-)
G223646 fars2,LOC102791206 other downstream 1368795 27756346 ~ 27795851 (-)
LOC120552583 NA other upstream 133013 29300690 ~ 29319934 (-)
LOC120552608 NA other upstream 312132 29479809 ~ 29543351 (-)
G223911 NA other upstream 382718 29550395 ~ 29563368 (-)
LOC120552738 yipf3,LOC106605823 other upstream 444315 29611992 ~ 29620659 (-)
G223897 NA other upstream 544337 29712014 ~ 29746456 (-)

Expression



Co-expression Network