G223870 (LOC107105063)


Basic Information

Item Value
gene id G223870
gene name LOC107105063
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 29338253 ~ 29339662 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU303110
CCTGGTAGTCCAGTATCCCCAGGGGCTCGTAGGAGGAGAAGTTCTCCAGTTTGGACTTGAGGATGATGGGGTTTCCTCTCCAGCGCGCCTCGATCACCTTCTTCCCGTTCTCGTAGTAGAGGCAGCGCTTGTACTCCACGAGGCCCAGCACGCACAGGTCCTCGCACATGTCGCCCGTCACCGAGCCCTCGCCGAACTCCAGGCACTGCGTCACAGAGCAGAGGCACACACACCTAAACTACACACCCTGAACAAGGTCATAATCGCTAATGATCGGAAAGGTGCTTCCAATTAAAATACATgtaatacatacaaaaaaacatgaaatatgtgGCCAAATgtcgaggtacttgtactttacttgagtcttttcttttcatgttactttctacttctactccgctacatttcagagagaaatattggactttttactccactacattcatctgttacagctttagttactagttactttagttactagttactttagttactccgctacattcatctgttacagctttagttactagttactttagttactccgctacattaatctgttccagctttagttactagttactttagttactccgctacattcatctgttccagctttagttactagttactttag

Function

NR:

description
PREDICTED: protein FAM69C-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU303110 True 643 lncRNA 0.44 2 29338253 29339662

Neighbor

gene id symbol gene type direction distance location
LOC120552587 hus1 coding downstream 176282 29151434 ~ 29161971 (-)
LOC120552571 NA coding downstream 190592 29125214 ~ 29147661 (-)
LOC120552600 NA coding downstream 225960 28377079 ~ 29112293 (-)
dnah5l LOC103377303,LOC103367559 coding downstream 244048 28930231 ~ 29094205 (-)
LOC120552567 NA coding downstream 982606 28303334 ~ 28355647 (-)
dnph1 NA coding upstream 263440 29603102 ~ 29610341 (-)
LOC120552739 NA coding upstream 289643 29629305 ~ 29672772 (-)
inhbaa inhba,LOC104934797,LOC102293179,LOC101479519 coding upstream 406846 29746508 ~ 29750259 (-)
eci2 eci2 coding upstream 522140 29861802 ~ 29895595 (-)
LOC120552613 NA coding upstream 560748 29900410 ~ 29924741 (-)
G223852 NA non-coding downstream 170576 29164646 ~ 29167677 (-)
G223851 NA non-coding downstream 173253 29163956 ~ 29165000 (-)
G223847 NA non-coding downstream 192602 29142928 ~ 29145651 (-)
G223808 NA non-coding downstream 409742 28908041 ~ 28928511 (-)
G223700 NA non-coding downstream 435822 28862375 ~ 28902431 (-)
G223873 NA non-coding upstream 8912 29348574 ~ 29354881 (-)
G223876 NA non-coding upstream 16957 29356619 ~ 29357892 (-)
LOC120552609 NA non-coding upstream 121013 29460675 ~ 29534359 (-)
G223821 NA non-coding upstream 135582 29475244 ~ 29538617 (-)
G223915 NA non-coding upstream 243427 29583089 ~ 29583794 (-)
LOC120552583 NA other downstream 18319 29300690 ~ 29319934 (-)
LOC120552566 NA other downstream 492000 28781890 ~ 28846253 (-)
G223686 LOC100697526 other downstream 820327 28011028 ~ 28517926 (-)
G223746 NA other downstream 1142828 28176365 ~ 28195425 (-)
G223681 NA other downstream 1422420 27897134 ~ 27915833 (-)
LOC120552608 NA other upstream 140147 29479809 ~ 29543351 (-)
G223911 NA other upstream 210733 29550395 ~ 29563368 (-)
LOC120552738 yipf3,LOC106605823 other upstream 272330 29611992 ~ 29620659 (-)
G223897 NA other upstream 372352 29712014 ~ 29746456 (-)
LOC120552628 NA other upstream 510994 29850656 ~ 29856972 (-)

Expression


Co-expression Network