G223894


Basic Information

Item Value
gene id G223894
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 29742170 ~ 29743831 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU303148
tcaaagtagccaccctttgctttttttgataactctgcaaacccttggtgttctctcaatgagcttcatgaggtagtcacctgaaatggttttaccttcacaggtgtgctttgtcagggttcattagtggaagtttttcccttattaataaaaaagcaaagggtggctactttgaagaatctaaaatataagacatgttttcagttatttcacacttttttgttaagtacataattccatatgtgttcattcatagttttgatgccttcagtgagaatctacaatgtaaacagtcatgaaaataaaaaggaaacgcattgaatgagaaggtgtgtccagaCTTCTGGCCTGTGCTGTAGCTTTTTAAGCTAAGTTAAAGGTTGGCGAGCCCTGGTCTGAAcccagtggagctgctgctctcctcAGGAACCATCTCCACCCAGGCTGGTCATCGCTTCAGACACCGACACACACTGTCCAAAACGTATATTTTAGGAGTTCAGAGTGAGAACCGGTTGGAAGTTCACAAGTCAGTATTCAAAAAGTCTTTAAAGTTGAACTTCTGCTTCACGAAGAGCgttttatttcatatatttattCTTGTTTCAGATTCAGTTGTTTTATTCGTTggtttattttcttaaataattatttgagttgtgatgtttttttattccctttccttttcctctctctctctctctctctctctctgtctgtctctctttctctctctctctctaacaacTCCAGTTCCCACAATGCTTTACTCTTTCATTTGATCTCAtcatgaaactgaaaaaaaagagaatccaCAGTCGCcttgttctgttttattttgggaGAAATCCGAAGTCGTCCGATCAGTGTTttctgtgtcgtgtgtgtttATATCAGTATTGTCGAACCTGTTCACCAAAAGTTTATTAAGAGTATCGGTCCCTGTTTGCTTGATGAAGTCACATgtgttactttttttattttttatttcctctttttttggttattgtattttgtatttttttattttttttttggaaaagagTGGACCCTCTTCTTCTGGACTTTTTGGGACAAACTCATAGTccgtgctgtgtgtgtggacgCAAAACGAAATGTcagtgcataaaaaaaaaaaggagcaaaaagTTGAAcaaaaaagaacacacacacacacacacacacacatatacacacatacacatatacacacattcacacacacacacacacacacacatatatacatacacacacacatacacacacatatacacacatacacacatatacacacacacacacacacacacacacacagacacacatttaaaagatgATGTAATTGTTCAGATTTTGCTCATTTTATCGAGAGGCAGAAAACACTGACACTGAACAAAGTGGACTAAGAGTAAGAAGTCTATTTGTATTCTGTATATATGGAAATAAAAGATTCCAGTTATGTTGCATTGCTTTGTTGTACAAATCAAAATGTGCTTGTGGCATTTTTCTAAtctaatttattttacaaatattgttttgttttctgtttctctgCTTCACCATTAAAGTTTAAATGATGTACACAAAGA
>TU303149
tcaaagtagccaccctttgctttttttgataactctgcaaacccttggtgttctctcaatgagcttcatgaggtagtcacctgaaatggttttaccttcacaggtgtgctttgtcagggttcattagtggaagtttttcccttattaataaaaaagcaaagggtggctactttgaagaatctaaaatataagacatgttttcagttatttcacacttttttgttaagtacataattccatatgtgttcattcatagttttgatgccttcagtgagaatctacaatgtaaacagtcatgaaaataaaaaggaaacgcattgaatgagaaggtgtgtccagaCTTCTGGCCTGTGCTGTAGCTTTTTAAGCTAAGTTAAAGGTTGGCGAGCCCTGGTCTGAAcccagtggagctgctgctctcctcAGGAACCATCTCCACCCAGGCTGGTCATCGCTTCAGACACCGACACACACTGTCCAAAACGTATATTTTAGGAGTTCAGAGTGAGAACCGGTTGGAAGTTCACAAGTCAGTATTCAAAAAGTCTTTAAAGTTGAACTTCTGCTTCACGAAGAGCgttttatttcatatatttattCTTGTTTCAGATTCAGTTGTTTTATTCGTTggtttattttcttaaataattatttgagttgtgatgtttttttattccctttccttttcctctctctctctctctctctctctctgtctgtctctctttctctctctctctctaacaacTCCAGTTCCCACAATGCTTTACTCTTTCATTTGATCTCAtcatgaaactgaaaaaaaagagaatccaCAGTCGCcttgttctgttttattttgggaGAAATCCGAAGTCGTCCGATCAGTGTTttctgtgtcgtgtgtgtttATATCAGTATTGTCGAACCTGTTCACCAAAAGTTTATTAAGAGTATCGGTCCCTGTTTGCTTGATGAAGTCACATgtgttactttttttattttttatttcctctttttttggttattgtattttgtatttttttattttttttttggaaaagagTGGACCCTCTTCTTCTGGACTTTTTGGGACAAACTCATAGTccgtgctgtgtgtgtggacgCAAAACGAAATGTcagtgcataaaaaaaaaaaggagcaaaaagTTGAAcaaaaaagaacacacacacacacacacacacacatatacacacatacacatatacacacattcacacacacacacacacacacacatatatacatacacacacacatacacacacatatacacacacacacacacacacacacacacagacacacatttaaaagatgATGTAATTGTTCAGATTTTGCTCATTTTATCGAGAGGCAGAAAACACTGACACTGAACAAAGTGGACTAAGAGTAAGAAGTCTATTTGTATTCTGTATATATGGAAATAAAAGATTCCAGTTATGTTGCATTGCTTTGTTGTACAAATCAAAATGTGCTTGTGGCATTTTTCTAAtctaatttattttacaaatattgttttgttttctgt

Function

GO:

id name namespace
GO:0006082 organic acid metabolic process biological_process
GO:0009069 serine family amino acid metabolic process biological_process
GO:0009070 serine family amino acid biosynthetic process biological_process
GO:1901605 alpha-amino acid metabolic process biological_process
GO:1901607 alpha-amino acid biosynthetic process biological_process
GO:0046394 carboxylic acid biosynthetic process biological_process
GO:0043436 oxoacid metabolic process biological_process
GO:0044283 small molecule biosynthetic process biological_process
GO:0006520 cellular amino acid metabolic process biological_process
GO:0008652 cellular amino acid biosynthetic process biological_process
GO:0006563 L-serine metabolic process biological_process
GO:0006564 L-serine biosynthetic process biological_process
GO:0019752 carboxylic acid metabolic process biological_process
GO:0016053 organic acid biosynthetic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU303148 True 1592 lncRNA 0.36 2 29742170 29743831
TU303149 False 1532 lncRNA 0.36 2 29742212 29743831

Neighbor

gene id symbol gene type direction distance location
LOC120552739 NA coding downstream 69398 29629305 ~ 29672772 (-)
dnph1 NA coding downstream 131829 29603102 ~ 29610341 (-)
LOC120552587 hus1 coding downstream 580199 29151434 ~ 29161971 (-)
LOC120552571 NA coding downstream 594509 29125214 ~ 29147661 (-)
dnah5l LOC103377303,LOC103367559 coding downstream 647965 28930231 ~ 29094205 (-)
inhbaa inhba,LOC104934797,LOC102293179,LOC101479519 coding upstream 2677 29746508 ~ 29750259 (-)
eci2 eci2 coding upstream 117971 29861802 ~ 29895595 (-)
LOC120552613 NA coding upstream 156579 29900410 ~ 29924741 (-)
xylb xylb coding upstream 552651 30296482 ~ 30333279 (-)
crygn2 crygn,LOC105025719 coding upstream 636278 30380109 ~ 30386006 (-)
G223905 NA non-coding downstream 18795 29693192 ~ 29723375 (-)
G223904 NA non-coding downstream 32161 29657221 ~ 29710009 (-)
G223898 NA non-coding downstream 47361 29614420 ~ 29694809 (-)
G223896 NA non-coding downstream 51791 29589833 ~ 29690379 (-)
G223930 NA non-coding upstream 117 29743948 ~ 29843233 (-)
G223903 NA non-coding upstream 9299 29753130 ~ 29801070 (-)
G223935 NA non-coding upstream 39285 29783116 ~ 29783836 (-)
G223948 NA non-coding upstream 93315 29837146 ~ 29865788 (-)
G223961 NA non-coding upstream 164034 29907865 ~ 29908396 (-)
LOC120552738 yipf3,LOC106605823 other downstream 121511 29611992 ~ 29620659 (-)
G223911 NA other downstream 178802 29550395 ~ 29563368 (-)
LOC120552608 NA other downstream 198819 29479809 ~ 29543351 (-)
LOC120552583 NA other downstream 422236 29300690 ~ 29319934 (-)
LOC120552566 NA other downstream 895917 28781890 ~ 28846253 (-)
LOC120552628 NA other upstream 106825 29850656 ~ 29856972 (-)
G224031 NA other upstream 654045 30397876 ~ 30578444 (-)
LOC120552615 NA other upstream 661352 30405183 ~ 30420550 (-)
LOC120552614 NA other upstream 703035 30446866 ~ 30493379 (-)
G224051 NA other upstream 888915 30632746 ~ 30681582 (-)

Expression


Co-expression Network