G223895


Basic Information

Item Value
gene id G223895
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 29739843 ~ 29786606 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU303153
ggtgtttggctcgaggtcatggtgcaaaggaccctagggtaaattactccgaaccatcactttaattacaTCATGTTTATTTAAATCTAACGCGTCGGCTACATTGCAGCGTAACGTTAGCGGACCGTTAGCGGAGTGGATGTACCGTTAGCCTGCAGCTAACGCGCAGCGTTACTGTCacagagcaacacacacacacacacagcagacacacacacacacagaaacacacacacgcacacatcgacacacacacacacacacacacatacacagaaacacacacacacacacacacacacatttagacacacacacacacacacaccgaaacacacacacacattgagacacacacacacacacagaaacacacacacacacacacacagacacagaaacacacacacagaaacacacacacacacacagaaacacacataacacacacacacacacacacacacacacacacacacacacacacaaacacacacacacacacacacacacacacacacacacacacacacacacagaaacacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagaaacaca
>TU303154
ggtgtttggctcgaggtcatggtgcaaaggaccctagggtaaattactccgaaccatcactttaattacaTCATGTTTATTTAAATCTAACGCGTCGGCTACATTGCAGCGTAACGTTAGCGGACCGTTAGCGGAGTGGATGTACCGTTAGCCTGCAGCTAACGCGCAGCGTTACTGTCacagagcaacacacacacacacacagcagacacacacacacacagaaacacacacacgcacacatcgacacacacacacacacacacacatacacagaaacacacacacacacacacacacacatttagacacacacacacacacacaccgaaacacacacacacattgagacacacacacacacagaaacacacacacacacacagagagacacacagaaacacagagaaacacacacacagaaacacacacacagaaacagagaa
>TU303155
ggtgtttggctcgaggtcatggtgcaaaggaccctagggtaaattactccgaaccatcactttaattacaTCATGTTTATTTAAATCTAACGCGTCGGCTACATTGCAGCGTAACGTTAGCGGACCGTTAGCGGAGTGGATGTACCGTTAGCCTGCAGCTAACGCGCAGCGTTACTGTCacagagcaacacacacacacacacagcagacacacacacacacagaaacacacacacgcacacatcgacacacacacacacacacacacatacacagaaacacacacacacacacacacacacatttagacacacacacacacacacaccgaaacacacacacacattgagacacacacacacacacacacacacacatgcagaagattacaaatacaaatattacggtgcaaatcctccatcataacagcaatgctccaaggtccaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU303153 True 616 lncRNA 0.47 2 29757381 29786606
TU303154 False 446 lncRNA 0.47 2 29784812 29786606
TU303155 False 449 lncRNA 0.47 2 29739843 29786606

Neighbor

gene id symbol gene type direction distance location
LOC120552739 NA coding downstream 67071 29629305 ~ 29672772 (-)
dnph1 NA coding downstream 129502 29603102 ~ 29610341 (-)
LOC120552587 hus1 coding downstream 577872 29151434 ~ 29161971 (-)
LOC120552571 NA coding downstream 592182 29125214 ~ 29147661 (-)
dnah5l LOC103377303,LOC103367559 coding downstream 645638 28930231 ~ 29094205 (-)
eci2 eci2 coding upstream 75196 29861802 ~ 29895595 (-)
LOC120552613 NA coding upstream 113804 29900410 ~ 29924741 (-)
xylb xylb coding upstream 509876 30296482 ~ 30333279 (-)
crygn2 crygn,LOC105025719 coding upstream 593503 30380109 ~ 30386006 (-)
LOC120552744 prkag2,LOC107373612 coding upstream 792885 30579491 ~ 30598932 (-)
G223905 NA non-coding downstream 16468 29693192 ~ 29723375 (-)
G223904 NA non-coding downstream 29834 29657221 ~ 29710009 (-)
G223898 NA non-coding downstream 45034 29614420 ~ 29694809 (-)
G223896 NA non-coding downstream 49464 29589833 ~ 29690379 (-)
G223906 NA non-coding downstream 121873 29615781 ~ 29617970 (-)
G223948 NA non-coding upstream 50540 29837146 ~ 29865788 (-)
G223961 NA non-coding upstream 121259 29907865 ~ 29908396 (-)
LOC120552633 NA non-coding upstream 160465 29947071 ~ 29948139 (-)
G223974 NA non-coding upstream 211228 29997834 ~ 30132250 (-)
G223983 NA non-coding upstream 253126 30039732 ~ 30120856 (-)
LOC120552738 yipf3,LOC106605823 other downstream 119184 29611992 ~ 29620659 (-)
G223911 NA other downstream 176475 29550395 ~ 29563368 (-)
LOC120552608 NA other downstream 196492 29479809 ~ 29543351 (-)
LOC120552583 NA other downstream 419909 29300690 ~ 29319934 (-)
LOC120552566 NA other downstream 893590 28781890 ~ 28846253 (-)
LOC120552628 NA other upstream 64050 29850656 ~ 29856972 (-)
G224031 NA other upstream 611270 30397876 ~ 30578444 (-)
LOC120552615 NA other upstream 618577 30405183 ~ 30420550 (-)
LOC120552614 NA other upstream 660260 30446866 ~ 30493379 (-)
G224051 NA other upstream 846140 30632746 ~ 30681582 (-)

Expression


Co-expression Network