G223896


Basic Information

Item Value
gene id G223896
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 29589833 ~ 29690379 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU303156
aacacacacacacagatacacacatacacacacacacacacacacacacacacacatacacacacacagagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagagacacacacacacacacacacacacacacatacacacacacagagacacacacacacacacacacacacacacacacacacacacacacacacacacacatacacacacacacacagagacacacacacacacacacacacacacacacaccatgagacacacacacagagacacacacagagacacacacacacacagacacacacacacacagagacacacacacacacacacacacacacaca
>TU303157
aacacacacacacagatacacacatacacacacacacacacacacacacacacacatacacacacacagagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagagacacacacacacacacacacacacacacatacacacacacagagacacacacacacacacacagagacacacacacacagacacacaca
>TU303158
aacacacacacacagatacacacatacacacacacacacacacacacacacacacatacacacacacagagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagagacacacacacacacacacacacacacacatacacacacacagagacacacacacacacacacacacagagacacacacacacagacacacaca
>TU303159
aacacacacacacagatacacacatacacacacacacacacacacacacacacacatacacacacacagagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagagacacacacacacacacacacacacacacatacacacacacagagacacacacacacacacacacacacacagacacacacagagacacacagagacacacacacagagacacacacagagacacacacacacacagacacacacacacacagagacacacacacacagagacacacagagacacacacacacacacacacacacagagacacacacagagacacacacacagacacagagacacacacagagacacacacacacacacacacacacacagagacacacacagagacacacacagacacagagacacacacagagacacaacacacacacacacacagagacacacacagagacacacacacacacacacagagacacacacagacacacacacacacacacacacacacacagagacacacacacagacacacacacagacacacacagacacagacagacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacatcatggcTGTCTCCTGTGTCAGTCGAGCAGCGTGCCTTGCTCCTGGGCTCGGGTCAGGCTGTCTTTGCGGAGCAGGTGGTGCACGCCCATCCTCTTCGGGCTCTTCTGCGGGCGCTGCGGGggggcggcggcggcggcggcgccgAGGGCGGGGTCGAGGTCCAGGAGGCGTGGCGAGATGACGGGCAGCTCGTGCGGTAAGACGTCTCTCTCCTCCGCTGagctctcttcttctccttcctcctcctcctcatcctcatcctcttcttcttcttcttgggtCCTACGGTTGTCGGCCGTGGCGCCATCGCCGTCGCCATCGTCGTCCTCCAGGCTCATCAGCAGCTTCTCCGTGGCGCCGGTTAGCCCGCGGCGTGCGCGCGGCTCCGTGTCGGT
>TU303160
TTTACAAAGTCAGAAAATAAAGGTTAGTAGAGTTTTAACAGTTTTTaacagtctctttttttcatcttttttatttcccagaacaggaagtgaaacaaccaatcagagcaggaAACAGTCCAGAGGTTTACAGCCTCCGTTTGTTACGAAACGTTTTCATTGGTCCTCCAGTGAGTCCACTTCCTGGATGAAGGACCCGGCCTTCTCCGGCGGCCATCTTAGATGTCCTCTGCAAACAGCAGTCTCAGAAACATTCCTCACATCCCATTGGTTCTGTGTGTTAGCCTGTCAGCTAGTTAGCCTGTCAACTAGTTAGCCTGTCAGCTAGTTAGCCTGTCAGCTCGTTAGCCTGTCAGCTCGTTAGCCTGTCAACTAGTTAGCCTGTCAGCTCGTTAGCCTGTCAACTAGTTAGCCTGTCAGCTAGTTAGCCTGTCAGCTCGTTAGCCTGTCAACTAGTTAGCCTGTCAGCTAGTTAGCCTGTCAACTAGTTAGCCTGTCAGCTAGTTAGCCTGTTAGCTAGTTAGCCTGTCAGCTCGTTAGCCTGTCAGCTCGTTAGCCAGTCAGCTCGTTAGCCTGTCAGCTCGTTAGCCTGTCAGCTCGTTAGCCTGTTAGCTCGTTAGCCTGTCAGCTCGTTAGCCTGTCAGCTCGTTAGCCTGTCAGCTCGTTAGCCAGTTAGCTCGTTAGTTGGTGCTCAAAGTTTTAGTCGACTCGTTTTGCTGCTTTCAGACTTCTTCTCTttagaacccccccccccatccctctgatgcatgctgggacacAGACTGATTCTAAACCAAAGATCCTCTATTCTAAAGAGAGCGCATTtcaaaggggcgtggcctcgtGAATGtgtctcctaaaggggcgtggcctcgtGTGAACGTGTCtctaaaggggcgtggcctcgtGTGAACGTGTCtctaaaggggcgtggcctcgtGTGAACGTGTCtctaaaggggcgtggcctcgtGTGAACGTGTCtctaaaggggcgtggcctcgtGAACCCACAGcgatgcctctgattggtggaactcatgctggtgaggagggggaggatTTACGACGCTGCACgaatcacgatctgttccacgcttctgccgttagcctccgccggcaagctaacgttagcttagctaacagctagctgacagcttgattcagtctaaaacaacgttaactcaaactaaacacaggctacagctgatctaacagctgatctaacagctgatctaacagctgatctaacagctgatctaacagctgttAAATATGCTAACGGTTACTTTCAGGATCTTTAAAAGTTATTACacgctgtctcagctagcggttagcccaattagccgttagctaaactagcgtagcttcctttattcagtggagcgcggtggtttatgggaGGAGTAGTTCCTTCCCTCTGAAATGACGATATGTAGcctacacagtcttgtacctttgactttttggggattttctgTTCGTTTTTTTACTCTAAATCGTAAGTTGTATGCTAATGAGTCCCGTGGTAGCTGGTTAGCCTAAAATACGCTCTGAATGTCTTCATGTACGAATGTTTCCAGACGCCAACGGGAGAATATTAGGGGAGGTATATTATCTGAAGCTACACAGAGTCTGGGTAACGAGATATTTTAGGGTGATGTTTCTCAGAGTGTAACATTATAGATAtatcttttattgtgaaaacagAAGCCTTGTTTGTAGTTCTAAACATTTCTGAGAGTAAATGTaacagagggaggagaggacaagagagagaggaggagaagaagaagaggaggagggtgaCCTTGGCTGAGAAAACGTCTCCGATTATATTCATGAAGAAGAATCATTAAAGCTGCAGCAGGCTATTTTTACTTCCTGTTCTGTCCTGAACATCTGatcaaatattaaacacacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacacacggagagacagacagacagacacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacagacacacacagacacagacagacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacatcatggcTGTCTCCTGTGTCAGTCGAGCAGCGTGCCTTGCTCCTGGGCTCGGGTCAGGCTGTCTTTGCGGAGCAGGTGGTGCACGCCCATCCTCTTCGGGCTCTTCTGCGGGCGCTGCGGGggggcggcggcggcggcggcgccgAGGGCGGGGTCGAGGTCCAGGAGGCGTGGCGAGATGACGGGCAGCTCGTGCGGTAAGACGTCTCTCTCCTCCGCTGagctctcttcttctccttcctcctcctcctcatcctcatcctcttcttcttcttcttgggtCCTACGGTTGTCGGCCGTGGCGCCATCGCCGTCGCCATCGTCGTCCTCCAGGCTCATCAGCAGCTTCTCCGTGGCGCCGGTTAGCCCGCGGCGTGCGCGCGGCTCCGTGTCGGT
>TU303161
cccccacacacacacacacacacacacacatacacacacacagagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagagacacacacacacacacacacacacacacatacacacacacagagacacacacacacacacacacacacacacacacacacacacacacacacacacacatacacacacacacacagagacacacacacacacacacacacacacacacacacacacacatacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU303156 False 384 lncRNA 0.48 3 29593230 29690379
TU303157 False 228 lncRNA 0.48 3 29592585 29690379
TU303158 False 232 lncRNA 0.48 3 29592585 29690379
TU303159 False 1081 lncRNA 0.56 5 29589833 29690379
TU303160 True 2558 lncRNA 0.50 2 29589833 29595629
TU303161 False 277 lncRNA 0.49 3 29634498 29652794

Neighbor

gene id symbol gene type direction distance location
LOC120552587 hus1 coding downstream 427862 29151434 ~ 29161971 (-)
LOC120552571 NA coding downstream 442172 29125214 ~ 29147661 (-)
LOC120552600 NA coding downstream 477540 28377079 ~ 29112293 (-)
dnah5l LOC103377303,LOC103367559 coding downstream 495628 28930231 ~ 29094205 (-)
LOC120552567 NA coding downstream 1234186 28303334 ~ 28355647 (-)
inhbaa inhba,LOC104934797,LOC102293179,LOC101479519 coding upstream 56129 29746508 ~ 29750259 (-)
eci2 eci2 coding upstream 171423 29861802 ~ 29895595 (-)
LOC120552613 NA coding upstream 210031 29900410 ~ 29924741 (-)
xylb xylb coding upstream 606103 30296482 ~ 30333279 (-)
crygn2 crygn,LOC105025719 coding upstream 689730 30380109 ~ 30386006 (-)
G223915 NA non-coding downstream 6039 29583089 ~ 29583794 (-)
G223821 NA non-coding downstream 51216 29475244 ~ 29538617 (-)
LOC120552609 NA non-coding downstream 55474 29460675 ~ 29534359 (-)
G223876 NA non-coding downstream 231941 29356619 ~ 29357892 (-)
G223873 NA non-coding downstream 234952 29348574 ~ 29354881 (-)
G223905 NA non-coding upstream 2813 29693192 ~ 29723375 (-)
G223899 sugct non-coding upstream 10180 29700559 ~ 29792987 (-)
G223895 NA non-coding upstream 49464 29739843 ~ 29786606 (-)
G223894 NA non-coding upstream 51791 29742170 ~ 29743831 (-)
G223930 NA non-coding upstream 53569 29743948 ~ 29843233 (-)
G223911 NA other downstream 26465 29550395 ~ 29563368 (-)
LOC120552608 NA other downstream 46482 29479809 ~ 29543351 (-)
LOC120552583 NA other downstream 269899 29300690 ~ 29319934 (-)
LOC120552566 NA other downstream 743580 28781890 ~ 28846253 (-)
G223746 NA other downstream 1394408 28176365 ~ 28195425 (-)
G223897 NA other upstream 21635 29712014 ~ 29746456 (-)
LOC120552628 NA other upstream 160277 29850656 ~ 29856972 (-)
G224031 NA other upstream 707497 30397876 ~ 30578444 (-)
LOC120552615 NA other upstream 714804 30405183 ~ 30420550 (-)
LOC120552614 NA other upstream 756487 30446866 ~ 30493379 (-)

Expression


Co-expression Network