G223897


Basic Information

Item Value
gene id G223897
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 29712014 ~ 29746456 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU303163
cctctctctatatatatatatatatatatatatatatatatatatacacacatgtgcgcctgctctaccaactgagctaacccccCGGGCCACAATTCACACACATGTTCTGcaggaaatgtgttttctaGCAgaatcagagacagagagagaaaaaaaaaaaaaaaaaaagagagaaaaaaaaaaagagagagagagagagagatcaacaGGTGACTTTGTGAACTTTATCTCTATCTTCAGTGTTTTTGGTTCTTCagctccatctctctgtctctccttcagcagaatccagagagagagagagagagagagagacagagagagagagagagaCAGGTGACTTTTATCTGTAGTCTAATCTTCAGCGTTCTGGgttcttcatctctctctccatccctttgTCTCTCTGGGACTATCAGCTCTCCTCTCCTCCGTCCTCCAGCAGGACTCCCAGAGACTCTCGACGACTGAACAgatgaaaagatgaaaagatgaaaagatagtaaaaacagaagaagaatatctaatatatttttgttacaaAAGGAGGGAGCGGGGCTTATTTATGCGTGGAGACGCTCGAGCGCCTCTCGCCGAGACGAGGAGCCTGAAAAACTACTAACAAAAAAATATCTCAAAACTATGCAACTTGTTTCACGTATTTCTTcatatttcacttttattttatttttatttttatttcaaaatgtacgAAGACGAAGAAAAGATTCTTTTGTGTTATTATTTGGAAgtctaaatctgtgtgtctgtgtgtgtgtgtctgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtctgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtgtctctgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtctctgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtctgtttgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgg
>TU303167
cctctctctatatatatatatatatatatatatatatatatatatacacacatgtgcgcctgctctaccaactgagctaacccccCGGGCCACAATTCACACACATGTTCTGcaggaaatgtgttttctaGCAgaatcagagacagagagagagagagagagagagagagagagagagag
>TU303168
cctctctctatatatatatatatatatatatatatatatatatatacacacatgtgcgcctgctctaccaactgagctaacccccCGGGCCACAATTCACACACATGTTCTGcaggaaatgtgttttctaGCAgaatcagagacagagagagaaaaaaaaaaaaaaaaaaagagagaaaaaaaaaaagagagagagagagagagatcaacaGGTGACTTTGTGAACTTTATCTCTATCTTCAGTGTTTTTGGTTCTTCagctccatctctctgtctctccttcagcagaatccagagagagagagacagagggagagagacagagagagagagagagacagagagagagagacagagagagagagagagagacagagagagagggagagagagggagagagagagagagagagagggaggagagggggagggaggaagagagagagagagagaaaagcaagGTGAGACAGGTGACTTTTATCTGTAGTCTAATCTTCAGCGTTCTGGgttcttcatctctctctccatccctttgTCTCTCTGGGACTATCAGCTCTCCTCTCCTCCGTCCTCCAGCAGGACTCCCAGAGACTCTCGACGACTGAACAgatgaaaagatgaaaagatgaaaagatagtaaaaacagaagaagaatatctaatatatttttgttacaaAAGGAGGGAGCGGGGCTTATTTATGCGTGGAGACGCTCGAGCGCCTCTCGCCGAGACGAGGAGCCTGAAAAACTACTAACAAAAAAATATCTCAAAACTATGCAACTTGTTTCACGTATTTCTTcatatttcacttttattttatttttatttttatttcaaaatgtacgAAGACGAAGAAAAGATTCTTTTGTGTTATTATTTGGAAgtctaaatctgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgcgtgtatatgtgtctctgtgtgtgtatgtatgtgtgtgcatgtgtgtgtgtgtatatatgtgtgtatgtgtgtctctgtgtatgtgtgtgtgtgtgtgtgtatgtatgtgtgtctctgtgtgtgtgtgtgtgtgtgtgcgtgtg

Function

GO:

id name namespace
GO:0046394 carboxylic acid biosynthetic process biological_process
GO:0016053 organic acid biosynthetic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU303163 False 1058 lncRNA 0.42 5 29713441 29746456
TU303167 False 180 lncRNA 0.41 2 29712014 29746456
TU303168 True 1098 TUCP 0.42 2 29737616 29746456

Neighbor

gene id symbol gene type direction distance location
LOC120552739 NA coding downstream 39242 29629305 ~ 29672772 (-)
dnph1 NA coding downstream 101673 29603102 ~ 29610341 (-)
LOC120552587 hus1 coding downstream 550043 29151434 ~ 29161971 (-)
LOC120552571 NA coding downstream 564353 29125214 ~ 29147661 (-)
LOC120552600 NA coding downstream 599721 28377079 ~ 29112293 (-)
inhbaa inhba,LOC104934797,LOC102293179,LOC101479519 coding upstream 52 29746508 ~ 29750259 (-)
eci2 eci2 coding upstream 115346 29861802 ~ 29895595 (-)
LOC120552613 NA coding upstream 153954 29900410 ~ 29924741 (-)
xylb xylb coding upstream 550026 30296482 ~ 30333279 (-)
crygn2 crygn,LOC105025719 coding upstream 633653 30380109 ~ 30386006 (-)
G223904 NA non-coding downstream 2005 29657221 ~ 29710009 (-)
G223898 NA non-coding downstream 17205 29614420 ~ 29694809 (-)
G223896 NA non-coding downstream 21635 29589833 ~ 29690379 (-)
G223906 NA non-coding downstream 94044 29615781 ~ 29617970 (-)
G223915 NA non-coding downstream 128220 29583089 ~ 29583794 (-)
G223903 NA non-coding upstream 6674 29753130 ~ 29801070 (-)
G223935 NA non-coding upstream 36660 29783116 ~ 29783836 (-)
G223948 NA non-coding upstream 90690 29837146 ~ 29865788 (-)
G223961 NA non-coding upstream 161409 29907865 ~ 29908396 (-)
LOC120552633 NA non-coding upstream 200615 29947071 ~ 29948139 (-)
LOC120552738 yipf3,LOC106605823 other downstream 91355 29611992 ~ 29620659 (-)
G223911 NA other downstream 148646 29550395 ~ 29563368 (-)
LOC120552608 NA other downstream 168663 29479809 ~ 29543351 (-)
LOC120552583 NA other downstream 392080 29300690 ~ 29319934 (-)
LOC120552566 NA other downstream 865761 28781890 ~ 28846253 (-)
LOC120552628 NA other upstream 104200 29850656 ~ 29856972 (-)
G224031 NA other upstream 651420 30397876 ~ 30578444 (-)
LOC120552615 NA other upstream 658727 30405183 ~ 30420550 (-)
LOC120552614 NA other upstream 700410 30446866 ~ 30493379 (-)
G224051 NA other upstream 886290 30632746 ~ 30681582 (-)

Expression


Co-expression Network