G223898


Basic Information

Item Value
gene id G223898
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 29614420 ~ 29694809 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU303169
ctccaccagactccatgtgaataatcaggacttttagcgtgtatagagccagcatatctccacatgtaaatgggtgaattaagggtttatttcaaccaaaccagagtggtgattgttggaacagtggaaagatgaaccaagacaacttttggtagttttatttagtttctgtccactttgaatgaagtgtgttttacgatgataaaagtcctgattatttacatggagcctGGTGGggatatgctggctctatacacgctaaaagtcctgattatttacatggagtctggtgggtgaacattagtcctgtagggctTGGTTCTAGttaaatactggaccagtttcagagacTGTTATTCacatcagacactcagacactcagacatggagacagagagtccaGGGTGATAAAAAAACCCTCAAAATGACCCTTTAAAATGGAGCCCTTTCATAATCCAttccttcctctcctttttAAGACTCACAtcgacattttattttgaaattcacaCAGGTTTAAATGTTCCTtcacataaaaagaaaaacaaagaatcaGGAGGCCCGAAGTGGTGTGGTGAAGTTGGCAAAAATAATGCAACAGGATcccaaaaataaaatgagaaacaTCACAGTGAGAGGAGACAGAAACAGGACAGTAACACTGACAGGGAGGGGCCCAGGGCTCCAGGCTACGCTCCCTCTGGTTtctttattacattattttttttgttatttcgtAGTGATTCGAGGTGGGAGGGGTTGAGTGCAATTAGCAGATTTGGGGTTTTGAACACAGCGAGCCACAGGAAGTAGAGGACATTATCGTCATAGCACCACAGCTTTCAGGCCTTCATAATACTGTACATCATTATTACTGCTGCTCTATGCTCTATGGGTTGCATAAGGGGGGTCTTTAAACAATCCCAGCCGGCGCGGGGGGCCAGAACGCAGAGGCGGGGGCTGTACGCAGAGTCTGGGGGCTAAATACGTTGGTAAATCGTAACTCTAGTTTATTAAAGTTACACTTTTAATCTTCTGTTGTTTCATCGTCGGTTATTAATATTCTACAGTCAGCGTtaatacaaatgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtctgtctctgtgtgtgtgtgtgtctccgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtctgtctgtgtgtgtgtgtgtgtgtctgtctctgtgtgtgtgtgtgtgtgtctgtctctgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtctgtctctgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtctgtctgtctgtctgtgtgtgtgtgtgtgtgtgtgtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU303169 True 1523 lncRNA 0.44 4 29614420 29694809

Neighbor

gene id symbol gene type direction distance location
dnph1 NA coding downstream 4079 29603102 ~ 29610341 (-)
LOC120552587 hus1 coding downstream 452449 29151434 ~ 29161971 (-)
LOC120552571 NA coding downstream 466759 29125214 ~ 29147661 (-)
LOC120552600 NA coding downstream 502127 28377079 ~ 29112293 (-)
dnah5l LOC103377303,LOC103367559 coding downstream 520215 28930231 ~ 29094205 (-)
inhbaa inhba,LOC104934797,LOC102293179,LOC101479519 coding upstream 51699 29746508 ~ 29750259 (-)
eci2 eci2 coding upstream 166993 29861802 ~ 29895595 (-)
LOC120552613 NA coding upstream 205601 29900410 ~ 29924741 (-)
xylb xylb coding upstream 601673 30296482 ~ 30333279 (-)
crygn2 crygn,LOC105025719 coding upstream 685300 30380109 ~ 30386006 (-)
G223915 NA non-coding downstream 30626 29583089 ~ 29583794 (-)
G223821 NA non-coding downstream 75803 29475244 ~ 29538617 (-)
LOC120552609 NA non-coding downstream 80061 29460675 ~ 29534359 (-)
G223876 NA non-coding downstream 256528 29356619 ~ 29357892 (-)
G223873 NA non-coding downstream 259539 29348574 ~ 29354881 (-)
G223899 sugct non-coding upstream 5750 29700559 ~ 29792987 (-)
G223895 NA non-coding upstream 45034 29739843 ~ 29786606 (-)
G223894 NA non-coding upstream 47361 29742170 ~ 29743831 (-)
G223930 NA non-coding upstream 49139 29743948 ~ 29843233 (-)
G223903 NA non-coding upstream 58321 29753130 ~ 29801070 (-)
G223911 NA other downstream 51052 29550395 ~ 29563368 (-)
LOC120552608 NA other downstream 71069 29479809 ~ 29543351 (-)
LOC120552583 NA other downstream 294486 29300690 ~ 29319934 (-)
LOC120552566 NA other downstream 768167 28781890 ~ 28846253 (-)
G223746 NA other downstream 1418995 28176365 ~ 28195425 (-)
G223897 NA other upstream 17205 29712014 ~ 29746456 (-)
LOC120552628 NA other upstream 155847 29850656 ~ 29856972 (-)
G224031 NA other upstream 703067 30397876 ~ 30578444 (-)
LOC120552615 NA other upstream 710374 30405183 ~ 30420550 (-)
LOC120552614 NA other upstream 752057 30446866 ~ 30493379 (-)

Expression


Co-expression Network