G223930


Basic Information

Item Value
gene id G223930
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 29743948 ~ 29843233 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU303204
catctgttacagctttagttactagttactttagttactccactacattcatctgttacagctttagttactagttactttagttactccactacattcatctgttacagctttagtttactagttactttagttactccactacattcatctgttccagctttagttactagttactttagttactccactacattcatctgttccagctttagttactagttactttagttactccactacattcatctgttccagctttagttactagttactttagttactccgctacattcatctgttccagctttagttactagttactttagttactagttactttagttactagttactttagttaggCGAATAAGAAAGCACTTAGAAGAAGAAACATGTAGATTCGGCTCATTTTCTTTGGCTATACagcacaggccaaaagtttggacacaccttctcattcaatgcgtttcctttttattttcatgact
>TU303206
tcatctgttacagctttagttactagttactttagttactccgctacattcatctgttacagctttagttactagttactttagttatccgctacattcatctgttccagctttagttactagttactttagttactccgctacattcatctgttacagctttagttactagttactttagttactccgctacattcatctgttacagctttagttactagttactttagttactccgctacattcatctgttacagctttagttactagttactttagttaattccgctacattcatctgttccagatttagttactagttactttatttactagttactttagttactccactacattcatctgttccagctttagttactagttactttagttactccactacattcatctgttccagctttagttactagttactttagttactccactacattcatctgttccagctttagttactagttactttagttactccgctacattcatctgttccagctttagttactagttactttagttactccactacattcatctgttacagctttagctactagttactttagttactccactacattaatctgttccagctttagttactttagttactccgctatattcatctgttccagctttagttactagttactttagttactagttactttagttactagttactttagttaggCGAATAAGAAAGCACTTAGAAGAAGAAACATGTAGATTCGGCTCATTTTCTTTGGCTATACagcacaggccaaaagtttggacacaccttctcattcaatgcgtttcctttttattttcatgact

Function

GO:

id name namespace
GO:1901607 alpha-amino acid biosynthetic process biological_process
GO:0008652 cellular amino acid biosynthetic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU303204 False 491 lncRNA 0.34 2 29743948 29744669
TU303206 True 843 lncRNA 0.34 3 29743948 29843233

Neighbor

gene id symbol gene type direction distance location
LOC120552739 NA coding downstream 71176 29629305 ~ 29672772 (-)
dnph1 NA coding downstream 133607 29603102 ~ 29610341 (-)
LOC120552587 hus1 coding downstream 581977 29151434 ~ 29161971 (-)
LOC120552571 NA coding downstream 596287 29125214 ~ 29147661 (-)
dnah5l LOC103377303,LOC103367559 coding downstream 649743 28930231 ~ 29094205 (-)
eci2 eci2 coding upstream 18569 29861802 ~ 29895595 (-)
LOC120552613 NA coding upstream 57177 29900410 ~ 29924741 (-)
xylb xylb coding upstream 453249 30296482 ~ 30333279 (-)
crygn2 crygn,LOC105025719 coding upstream 536876 30380109 ~ 30386006 (-)
LOC120552744 prkag2,LOC107373612 coding upstream 736258 30579491 ~ 30598932 (-)
G223894 NA non-coding downstream 117 29742170 ~ 29743831 (-)
G223905 NA non-coding downstream 20573 29693192 ~ 29723375 (-)
G223904 NA non-coding downstream 33939 29657221 ~ 29710009 (-)
G223898 NA non-coding downstream 49139 29614420 ~ 29694809 (-)
G223896 NA non-coding downstream 53569 29589833 ~ 29690379 (-)
G223961 NA non-coding upstream 64632 29907865 ~ 29908396 (-)
LOC120552633 NA non-coding upstream 103838 29947071 ~ 29948139 (-)
G223974 NA non-coding upstream 154601 29997834 ~ 30132250 (-)
G223983 NA non-coding upstream 196499 30039732 ~ 30120856 (-)
G224011 NA non-coding upstream 367928 30211161 ~ 30211846 (-)
LOC120552738 yipf3,LOC106605823 other downstream 123289 29611992 ~ 29620659 (-)
G223911 NA other downstream 180580 29550395 ~ 29563368 (-)
LOC120552608 NA other downstream 200597 29479809 ~ 29543351 (-)
LOC120552583 NA other downstream 424014 29300690 ~ 29319934 (-)
LOC120552566 NA other downstream 897695 28781890 ~ 28846253 (-)
LOC120552628 NA other upstream 7423 29850656 ~ 29856972 (-)
G224031 NA other upstream 554643 30397876 ~ 30578444 (-)
LOC120552615 NA other upstream 561950 30405183 ~ 30420550 (-)
LOC120552614 NA other upstream 603633 30446866 ~ 30493379 (-)
G224051 NA other upstream 789513 30632746 ~ 30681582 (-)

Expression


Co-expression Network