G223948


Basic Information

Item Value
gene id G223948
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 29837146 ~ 29865788 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU303233
caggtatgtagagagagagacaggtatgtagaggagagagaggtttGTAGTGATAGAGAGACAATCAtgtggagagagacaggtatgtagatgagagagagactagatagaccgagagagagagagagagagagagagagagagagagactagatagacagagagagagagagagagagagagagagactagatggagagagagacaggtatgtagaggagagagaggtttGTAGTGATAGAGAGACAATCAtgtggagagagacaggtatgtagatGAGAGAGAGACTAGATAGACCGAGAGAGactagatagagagagagactagatagacagagagagagagactagatggacagagagagagagagactagatggacagagagagagagagactagataGACAGAGATAGactagatagacagagagagtttagatatatatagactagatagacagagagagagagagagactagatagacagagagagaggctatatagagagagagagactggtaTGTAGGGATAGAGAGATATGGGTATGTAGAAAGTGTTcctgaacattttttttaaataagaaacAGAggtagaaagagagacacatacagagacagacatgtttGTAGAGAGAAATTCAGGtcggcagagacagacaggtttgtgggaagtgagagaaagaggtgAAGGAGAAGGAATGATCATAGCAAAGAGCCAGGATAAGTTAATTTGTGTATGGATGAgttgtgacaataaagttcATCTGCAAAGTAAACAGCATTGCTTCTGTGGCATTTCTTGAATGAAATCCTATTCGATGCAGAAACGGACCACTTGACCACATAAAATAACATTTGTCACCAACTATTCTATGAATAAATTAACTAGGTGAATCTGTGTTAAGAATCTTGACTTTTTAAAAATCA
>TU303236
caggtatgtagagagagagacaggtatgtagaggagagagaggtttGTAGTGATAGAGAGACAATCAtgtggagagagacaggtatgtagatgagagagagactagatagaccgagagagagagagagagagagagagagagagagagactagatagacagagagagagagagagagagagagagagactagatggagagagagacaggtatgtagaggagagagaggtttGTAGTGATAGAGAGACAATCAtgtggagagagacaggtatgtagatGAGAGAGAGACTAGATAGACCGAGAGagactagagagagagagagagagagagagagagagagactagatagacagagagagagagactagatggacagagagagagagactagatggagagagagacaggtatgtagaggagagagaggtttGTAGTGATAGAGAGACAATCAtgtggagagagacaggtatgtagatGAGAGAGAGACTAGATAGACCGAGAGAGactagatagagagagagactagatagacagagagagagagagagagactagatggacagagagagagagactagatggacagagagagagagagactagataGACAGAGATAGactagatagacagagagagaatatatatagagagactagacagacagagagagtttagatatatatagactagatagacagagagagagagagagactagatagacagagagagaggctatatagagagagagagactggtaTGTAGGGATAGAGAGATATGGGTATGTAGAAAGTGTTcctgaacattttttttaaataagaaacAGAggtagaaagagagacacatacagagacagacatgtttGTAGAGAGAAATTCAGGtcggcagagacagacaggtttgtgggaagtgagagaaagaggtgAAGGAGAAGGAATGATCATAGCAAAGAGCCAGGATAAGTTAATTTGTGTATGGATGAgttgtgacaataaagttcATCTGCAAAGTAAACAGCATTGCTTCTGTGGCATTTCTTGAATGAAATCCTATTCGATGCAGAAACGGACCACTTGACCACATAAAATAACATTTGTCACCAACTATTCTATGAATAAATTAACTAGGTGAATCTGTGTTAAGAATCTTGACTTTTTAAAAATCA
>TU303237
caggtatgtagagagagagacaggtatgtagagagagagagagagagagagagagagagactagatggagagagagacaggtatgtagaggagagagaggtttGTAGTGATAGAGAGACAATCAtgtggagagagacaggtatgtagatGAGAGAGAGACTAGATAGACCGAGAGagactagagagagagagagagagagagagagagagagactagatagacagagagagagagactagatggacagagagagagagactagatggagagagagacaggtatgtagaggagagagaggtttGTAGTGATAGAGAGACAATCAtgtggagagagacaggtatgtagatGAGAGAGAGACTAGATAGACCGAGAGAGactagatagagagagagactagatagacagagagagagagactagatggacagagagagagagagactagatggacagagagagagagagactagataGACAGAGATAGactagatagacagagagagtttagatatatatagactagatagacagagagagagagagagactagatagacagagagagaggctatatagagagagagagactggtaTGTAGGGATAGAGAGATATGGGTATGTAGAAAGTGTTcctgaacattttttttaaataagaaacAGAggtagaaagagagacacatacagagacagacatgtttGTAGAGAGAAATTCAGGtcggcagagacagacaggtttgtgggaagtgagagaaagagGGGAAGGAAT

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
TU303233 False 927 lncRNA 0.41 4 29864537 29865788
TU303236 True 1164 lncRNA 0.41 3 29864537 29865788
TU303237 False 765 lncRNA 0.43 5 29837146 29865788

Neighbor

gene id symbol gene type direction distance location
inhbaa inhba,LOC104934797,LOC102293179,LOC101479519 coding downstream 86887 29746508 ~ 29750259 (-)
LOC120552739 NA coding downstream 164374 29629305 ~ 29672772 (-)
dnph1 NA coding downstream 226805 29603102 ~ 29610341 (-)
LOC120552587 hus1 coding downstream 675175 29151434 ~ 29161971 (-)
LOC120552571 NA coding downstream 689485 29125214 ~ 29147661 (-)
LOC120552613 NA coding upstream 34622 29900410 ~ 29924741 (-)
xylb xylb coding upstream 430694 30296482 ~ 30333279 (-)
crygn2 crygn,LOC105025719 coding upstream 514321 30380109 ~ 30386006 (-)
LOC120552744 prkag2,LOC107373612 coding upstream 713703 30579491 ~ 30598932 (-)
LOC120552139 NA coding upstream 931396 30797184 ~ 30806336 (-)
G223903 NA non-coding downstream 36076 29753130 ~ 29801070 (-)
G223899 sugct non-coding downstream 44159 29700559 ~ 29792987 (-)
G223895 NA non-coding downstream 50540 29739843 ~ 29786606 (-)
G223935 NA non-coding downstream 53310 29783116 ~ 29783836 (-)
G223894 NA non-coding downstream 93315 29742170 ~ 29743831 (-)
G223961 NA non-coding upstream 42077 29907865 ~ 29908396 (-)
LOC120552633 NA non-coding upstream 81283 29947071 ~ 29948139 (-)
G223974 NA non-coding upstream 132046 29997834 ~ 30132250 (-)
G223983 NA non-coding upstream 173944 30039732 ~ 30120856 (-)
G224011 NA non-coding upstream 345373 30211161 ~ 30211846 (-)
G223897 NA other downstream 90690 29712014 ~ 29746456 (-)
LOC120552738 yipf3,LOC106605823 other downstream 216487 29611992 ~ 29620659 (-)
G223911 NA other downstream 273778 29550395 ~ 29563368 (-)
LOC120552608 NA other downstream 293795 29479809 ~ 29543351 (-)
LOC120552583 NA other downstream 517212 29300690 ~ 29319934 (-)
G224031 NA other upstream 532088 30397876 ~ 30578444 (-)
LOC120552615 NA other upstream 539395 30405183 ~ 30420550 (-)
LOC120552614 NA other upstream 581078 30446866 ~ 30493379 (-)
G224051 NA other upstream 766958 30632746 ~ 30681582 (-)
LOC120552646 NA other upstream 1152042 31017830 ~ 31020186 (-)

Expression


Co-expression Network