G224031


Basic Information

Item Value
gene id G224031
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 30397876 ~ 30578444 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU303357
TTGAGTCAGACTCCATTTagtgagaggagaagagagcaggaggaggaaactgAAGGCTGAGCAGGACTGACTTCAGATCAGAAGATGAGTGATTTGAAGGACGGAGCAGAGTCTGTAGTATCTGGCTGTCAGTCTATGAAGAGTGACCGGTCCAGAGATGAAACTCCATGCCTCAGTTCTgaacctggaccctcagacacaaaaaagaggaagagcaGTGATGTTTGTGAGGAGGATCAGCCGTCCTGCTGTGCTTTGTGTCAGGACGTCCTGAAGGATCCAGTCTCTACCAGCTGTGGACACTGGTTCTGCAGACAGTGCATCACCTCATACTGGGACCAGTCTGCTTCATCAGGAGACTCCTGCTGTCCCCAGTGTGGAGAAAGATCCAGAACAATGTACGttgttaaacataaacataagatCAGTGTGAAGGGGACATTTGAACATGTGACTGAAGGAGCTGatcaaac
>TU303358
CTCCATTTAGTGAGACCAGaagagagcaggaggaggaaactgAAGGCTGAGGCAGGACTGACTTCAGATCAGAAGATGAGTgatttggaggaagaggaggacggaGCAGAGTCTGTAGTATCTGGCTGTCAGTCTATGAAGAGTGACCGGTCCAGAGATTATCCTCCAGACTTCAGTACTgaacctggaccctcagacacaaaCTGCCATTGGAACCTGACTCCTGCTACCGCTTCACTCCTGCCATCCACCGAGCAGACAGCCATCACTGGACCCCACCACTAGCTCCTTCCCAGAAACCACCTTCACCCCGTTCTCCATCCTGGAAACCTGGACTTGCTTTTCCCCTTCGGAAACCTGGACTCGATACTTGAgtactttaaataaaacctgttaattcacactcctggctctgtgttctgtctgcatttgggttctgT
>TU303361
GAAGAGTAGAACAGGTGAGACTCCATTTAGTGAGACCAGaagagagcaggaggaggaaactgAAGGCTGAGGCAGGACTGACTTCAGATCAGAAGATGAGTgatttggaggaagaggaggacggaGCAGAGTCTGTAGTATCTGGCTGTCAGTCTAGGAAGAGTGACCGGTCCAGAAGAGATCCTCCAGACTTCAGTACTgaacctggaccctcagacacaaaCTGCCATTGGAACCTGACTCCTGCTACCGCTTCACTCCTGCCATCCACCGAGCAGACAGCCATCACTGGACCCCACCACTAGCTCCTTCCCAGAAACCACCTTACCCGTTCTCCATCCTGGAAACCTGGACTTGCTTTTCCCCTTCGGAAACCTGGACTCGATACTTGAgtactttaaataaaacctgttaattcacactcctg
>TU303362
CTCGCGCTAGAAGAAGAGGGACAGGAAGGGGCGGGGTCAAGATGTAGCGCTGACAGAAAGCTGACGTGTGATTGGCCCGAGAGGCTCTGAGAGTCTGTCAGCCGCTGCAGGGCTAGGATTGGCCGCTGCTCTGAAGGAGGGAGGGATGTCATGTGCGGGAGCCAATCAGGGATCCGACAAAGAGCAAAAACACTTTAAATATTACGGGCAGAAAAGAAGATtgtaaaaacattatttattacaGAAATAATTTCTTTTGTTTGGGTTTTATTCGCGTCCATCACGTGTGTCATGGCGGCTTTTTATTTTAGCCGCAGTTTGTGATTGGACGAGAGGGAGAGTTTTTAACCAATCATTATTATAATAGTTTTTATTCCAGCTAGCACTGAAACACTATTTATTTGCTGTAGATTACAATTcttacatatataataataataataataataataatattactctcacacacacacacagactcacacacacacatacacacacacgcacacacacacagacacacacacacaaacacacagactcacaaacacacacagactcacacgcgcgcacacacacacacacacacacactcacatacactcacagacacacagagactctcacacacacacacacacacacacagtgtaatgTAAAGATTTTTATGGATTTTGTTTTATAGAGatataaaaaaagatcaaaagtctgttttgttatttaacattttaaatgaatctgtacagaaatgtattttattgttaAATTAATGTATTTATAGATTGTAGGAGATGTTGAGATCTTTTTAAATAAGACTGAACCTGTttctgtttaaatgttttataaaagatgtttaaagcacttttattctgaaaggagATGATGAGGCAGGAAGTAAATCAGCTGTTTGTATCCGGGGATGTAAAAgatgtttttataaatattactgtgtgtgttgctgttgttaTGAACAATCAATAAAACATCCAGATTTGTCTTTgaaaaaaaaaaaaaaa
>TU303365
TTGAGTCAGACTCCATTTagtgagaggagaagagagcaggaggaggaaactgAAGGCTGAGCAGGACTGACTTCAGATCAGAAGATGAGTgatttggaggaagaggaggacggaGCAGAGTCTGTAGTATCTGGCTGTCAGTCTAGGAAGAGTGACCGGTCCAGAAGAGATCCTCCAGACTTCAGTACTgaacctggaccctcagacacaaaCTGCCATTGGAACCTGACTCCTGCTACCGCTTCACTCCTGCCATCCACCGAGCAGACAGCCACCATCACTGGACCCCACCACTAGCTCCTTCCCAGAAACCACCTTCACCCCGTTCTCCATCCTGGAAACCTGGACTTGCTTTTCCCCTTCGGAAACCTGGACTCGATACTTGAgtactttaaataaaacctgttaattcacactcctggctctgtgttctgtctgcatttgggttctgT
>TU303367
CTCGCGCTAGAAGAAGAGGGACAGGAAGGGGCGGGGTCAAGATGTAGCGCTGACAGAAAGCTGACGTGTGATTGGCCCGAGAGGCTCTGAGAGTCTGTCAGCCGCTGCAGGGCTAGGATTGGCCGCTGCTCTGAAGGAGGGAGGGATGTCATGTGCGGGAGCCAATCAGGGATCCGACAAAGAGCAAAAACACTTTAAATATTACGGGCAGAAAAGAAGATtgtaaaaacattatttattacaGAAATAATTTCTTTTGTTTGGGTTTTATTCGCGTCCATCACGTGTGTCATGGCGGCTTTTTATTTTAGCCGCAGTTTGTGATTGGACGAGAGGGAGAGTTTTTAACCAATCATTATTATAATAGTTTTTATTCCAGCTAGCACTGAAACACTATTTATTTGCTGTAGATTACAATTcttacatatataataataataataataataataatattactctcacacacacacacagactcacacacacacatacacacacacacacacacacacacacagacacacacacacagacattctcATCCCTTTTCCCACTATAATTACAATCATGAGTCAC

Function

GO: NA

KEGG:

id description
ko05412 Arrhythmogenic right ventricular cardiomyopathy

RNA

RNA id representative length rna type GC content exon number start site end site
TU303357 False 473 TUCP 0.49 4 30461502 30465869
TU303358 False 440 lncRNA 0.51 4 30397876 30493383
TU303361 False 427 lncRNA 0.51 3 30441333 30443890
TU303362 True 1016 lncRNA 0.37 3 30493202 30578444
TU303365 False 452 lncRNA 0.51 4 30397876 30465869
TU303367 False 579 lncRNA 0.42 2 30469814 30578444

Neighbor

gene id symbol gene type direction distance location
crygn2 crygn,LOC105025719 coding downstream 11870 30380109 ~ 30386006 (-)
xylb xylb coding downstream 64597 30296482 ~ 30333279 (-)
LOC120552613 NA coding downstream 473135 29900410 ~ 29924741 (-)
eci2 eci2 coding downstream 502281 29861802 ~ 29895595 (-)
inhbaa inhba,LOC104934797,LOC102293179,LOC101479519 coding downstream 647617 29746508 ~ 29750259 (-)
LOC120552744 prkag2,LOC107373612 coding upstream 1047 30579491 ~ 30598932 (-)
LOC120552139 NA coding upstream 218740 30797184 ~ 30806336 (-)
LOC120552642 NA coding upstream 519622 31098066 ~ 31102487 (-)
LOC120552143 NA coding upstream 655310 31233754 ~ 31238960 (-)
G224016 NA non-coding downstream 19868 30375412 ~ 30378008 (-)
G224025 NA non-coding downstream 29374 30366857 ~ 30368502 (-)
G224015 NA non-coding downstream 99025 30298424 ~ 30298851 (-)
G224011 NA non-coding downstream 186030 30211161 ~ 30211846 (-)
G223974 NA non-coding downstream 265626 29997834 ~ 30132250 (-)
G224065 NA non-coding upstream 136469 30714913 ~ 30719218 (-)
G224081 NA non-coding upstream 221524 30799968 ~ 30800263 (-)
G224069 NA non-coding upstream 222170 30800614 ~ 30824856 (-)
G224087 NA non-coding upstream 236966 30815410 ~ 30816754 (-)
LOC120552651 NA non-coding upstream 257930 30836374 ~ 30840555 (-)
LOC120552628 NA other downstream 540904 29850656 ~ 29856972 (-)
G223897 NA other downstream 651420 29712014 ~ 29746456 (-)
LOC120552738 yipf3,LOC106605823 other downstream 777217 29611992 ~ 29620659 (-)
G223911 NA other downstream 834508 29550395 ~ 29563368 (-)
LOC120552608 NA other downstream 854525 29479809 ~ 29543351 (-)
G224051 NA other upstream 54302 30632746 ~ 30681582 (-)
LOC120552646 NA other upstream 439386 31017830 ~ 31020186 (-)
G224195 NA other upstream 632317 31210761 ~ 31211360 (-)
zbtb14 zbtb14,LOC108251587,LOC108228861,LOC106533852 other upstream 720154 31298598 ~ 31328575 (-)
G224245 NA other upstream 721579 31300023 ~ 31301032 (-)

Expression


Co-expression Network