G224194


Basic Information

Item Value
gene id G224194
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 31207908 ~ 31208791 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU303597
ttcacacagttacacattcatacctggaagttgcccagtaccaccacagtctgatctgaccacattcatactggaagctgcccagtaccaccacagtctgatctgatcacattcatactggaagctgcccagtaccaccacagtctgatctgatcacattcatacctggaagctgcccagtaccaccacagtctgatctgaccacattcatactggaagctgcccagtaccaccacagtctgatctgatcacattcatacctggaacctgcccagtaccaccacagtctgatctgatcacattcatactggaagctgcccaacACCacctggttagctcagttggtagagcgcgcgcccatatatggaggtttacacctcgactccgacctgcggtcctttgctgcatgtcctctctctctctctctctctctctctctctctctctccctctc
>TU303599
ttcacacagttacacattcatacctggaagttgcccagtaccaccacagtctgatctgaccacattcatactggaagctgcccagtaccaccacagtctgatctgatcacattcatacctggaagctgcccagtaccaccacagtctgatctgatcacattcatacctggaagctgcccagtaccaccacagtctgatctgaccacattcatactggaagctgcccagtaccaccacagtctgatctgatcacattcatactggaagctgcccaacACCacctggttagctcagttggtagagcgcgcgcccatatatggaggtttacacctcgactccgacctgcggtcctttgctgcatgtcctctctctctctctctctctctctctctctctctctccctctc
>TU303602
ttcacacagttacacattcatacctggaagttgcccagtaccaccacagtctgatctgaccacattcatactggaagctgcccagtaccaccacagtctgatctgatcacattcatacctggaagctgcccagtaccaccacagtctgatctgatcacattcatacctggaagctgcccagtaccaccacagtctgatctgatcacattcatacctggaagctgcccagtaccaccacagtctgatctgatcacattcatacctggaagctgcccagtaccaccacagtctgatctgaccacattcatactggaagctgcccagtaccaccacagtctgatctgatcacattcatactggaagctgcccaacACCacctggttagctcagttggtagagcgcgcgcccatatatggaggtttacacctcgactccgacctgcggtcctttgctgcatgtcctctctctctctctctctctctctctctctctctctccctctc
>TU303604
ttcacacagttacacattcatacctggaagttgcccagtaccaccacagtctgatctgaccacattcatactggaagctgcccagtaccaccacagtctgatctgatcacattcatacctggaagctgcccagtaccaccacagtctgatctgatcacattcatacctggaagctgcccagtaccaccacagtctgatctgatcacattcatacctggaagctgcccagtaccaccacagtctgatctgatcacattcatactggaagctgcccagtaccaccacagtctgatctgatcacattcatacctggaagctgcccagtaccaccacagtctgatctgaccacattcatactggaagctgcccagtaccaccacagtctgatctgatcacattcatacctggaacctgcccagtaccaccacagtctgatctgatcacattcatactggaagctgcccaacACCacctggttagctcagttggtagagcgcgcgcccatatatggaggtttacacctcgactccgacctgcggtcctttgctgcatgtcctctctctctctctctctctctctctctctctctctccctctc
>TU303605
ttcacacagttacacattcatacctggaagttgcccagtaccaccacagtctgatctgaccacattcatactggaagctgcccagtaccaccacagtctgatctgatcacattcatacctggaagctgcccagtaccaccacagtctgatctgatcacattcatacctggaagctgcccagtaccaccacagtctgatctgatcacattcatacctggaagctgcccagtaccaccacagtctgatctgatcacattcatacctggaagctgcccagtaccaccacagtctgatctgatcacattcatactggaagctgcccagtaccaccacagtctgatctgaccacattcatactggaagctgcccagtaccaccacagtctgatctgatcacattcatactggaagctgcccaacACCacctggttagctcagttggtagagcgcgcgcccatatatggaggtttacacctcgactccgacctgcggtcctttgctgcatgtcctctctctctctctctctctctctctctctctctctccctctc
>TU303609
ttcacacagttacacattcatactggaagctgcccagtaccaccacagtctgatctgatcacattcatacctggaagctgcccagtaccaccacagtctgatctgatcacattcatacctggaagctgcccagtaccaccacagtctgatctgaccacattcatactggaagctgcccagtaccaccacagtctgatctgatcacattcatactggaagctgcccaacACCacctggttagctcagttggtagagcgcgcgcccatatatggaggtttacacctcgactccgacctgcggtcctttgctgcatgtcctctctctctctctctctctctctctctctctctctccctctc
>TU303610
ttcacacagttacacattcatactggaagctgcccagtaccaccacagtctgatctgatcacattcatacctggaagctgcccagtaccaccacagtctgatctgatcacattcatacctggaagctgcccagtaccaccacagtctgatctgatcacattcatacctggaagctgcccagtaccaccacagtctgatctgatcacattcatacctggaagctgcccagtaccaccacagtctgatctgatcacattcatactggaagctgcccagtaccaccacagtctgatctgatcacattcatacctggaagttgcccagtaccaccacagtctgatctgaccacattcatactggaagctgcccagtaccaccacagtctgatctgaccacattcatactggaagctgcccagtaccaccacagtctgatctgatcacattcatacctggaacctgcccagtaccaccacagtctgatctgatcacattcatactggaagctgcccaacACCacctggttagctcagttggtagagcgcgcgcccatatatggaggtttacacctcgactccgacctgcggtcctttgctgcatgtcctctctctctctctctctctctctctctctctctctccctctc

Function

GO:

id name namespace
GO:0005198 structural molecule activity molecular_function
GO:0005212 structural constituent of eye lens molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU303597 False 454 lncRNA 0.51 2 31207908 31208791
TU303599 False 407 lncRNA 0.51 3 31207908 31208791
TU303602 False 503 lncRNA 0.51 3 31207908 31208791
TU303604 False 598 lncRNA 0.51 2 31207908 31208791
TU303605 False 550 lncRNA 0.51 3 31207908 31208791
TU303609 False 359 lncRNA 0.52 4 31207908 31208791
TU303610 True 645 lncRNA 0.51 3 31207908 31208791

Neighbor

gene id symbol gene type direction distance location
LOC120552642 NA coding downstream 105421 31098066 ~ 31102487 (-)
LOC120552139 NA coding downstream 401572 30797184 ~ 30806336 (-)
LOC120552744 prkag2,LOC107373612 coding downstream 608976 30579491 ~ 30598932 (-)
crygn2 crygn,LOC105025719 coding downstream 821902 30380109 ~ 30386006 (-)
xylb xylb coding downstream 874629 30296482 ~ 30333279 (-)
LOC120552143 NA coding upstream 24963 31233754 ~ 31238960 (-)
G224154 NA non-coding downstream 17001 31011645 ~ 31190907 (-)
G224158 NA non-coding downstream 36107 31162729 ~ 31171801 (-)
G224188 NA non-coding downstream 38020 31169482 ~ 31169888 (-)
G224162 NA non-coding downstream 74503 31092919 ~ 31133405 (-)
G224160 NA non-coding downstream 82583 31035092 ~ 31125325 (-)
G224200 NA non-coding upstream 11243 31220034 ~ 31602620 (-)
G224226 NA non-coding upstream 47317 31256108 ~ 31283580 (-)
G224229 NA non-coding upstream 48908 31257699 ~ 31360661 (-)
LOC120552533 NA non-coding upstream 75903 31284694 ~ 31312314 (-)
G224241 NA non-coding upstream 88579 31297370 ~ 31309228 (-)
LOC120552646 NA other downstream 187722 31017830 ~ 31020186 (-)
G224051 NA other downstream 526326 30632746 ~ 30681582 (-)
G224031 NA other downstream 629464 30397876 ~ 30578444 (-)
G224195 NA other upstream 1970 31210761 ~ 31211360 (-)
zbtb14 zbtb14,LOC108251587,LOC108228861,LOC106533852 other upstream 89807 31298598 ~ 31328575 (-)
G224245 NA other upstream 91232 31300023 ~ 31301032 (-)
LOC120551970 LOC103372613,LOC105921230,LOC107100929,LOC101066394,LOC100709658 other upstream 121905 31330696 ~ 31337397 (-)
epb41l3a LOC100705796,LOC102304920,LOC101475436,LOC102201773,LOC108251472,LOC107100932 other upstream 251840 31460631 ~ 31511341 (-)

Expression


Co-expression Network