olfm3a (olfm3,LOC103369880,LOC108250954)


Basic Information

Item Value
gene id olfm3a
gene name olfm3,LOC103369880,LOC108250954
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 9029123 ~ 9083108 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039789421.1
agcctaataaCTGCTTGTTAGCTAGTTGATAACACGAGATTTAAGCATGTCTAACGGTTGATTTAGCACCCTTTGTCTACCAGAGATgacaagttagctgttagctgttagtaAGCTTATGTTAGTTGTGTATTAGCATGCTAAGGCACTAGCAAAACACAATACTATAGCTTTctgatttatttacatttcacaCAAGTTGCATactgtgtgcaaaatgcagctttagcttaatttacagaCTTATCACTTGTTTACTATAAAGACATCTTAATGACAGCCATGCTCCACCCTCAGCCTTTAGCCATCTTGCTATCATGAACCAGGCAGCCTTTTTGACTCATCGGAGCACCGGGGAGCTGTGGGTGTAATGCCGGTAACCGCGAGGTCCCTGTTCCGCCGTCGGAGCGCTCTCTCCGTGTTTCAACAGTAGAGACGCGGTGAGTGAACAAGAGGACAGGAGCTCTATGTTAAAGGACTGCACCTTGGAGAAAAGTGGCTGCCCGGAGCCCGTAACCATGCGGGTCCTGTTGAGCGTCCTGTACCCCGTCCTCTCCCTCACCATCTTCGGATTATACCCCTCTATGACTATCGGCCCAAAGGAGGGCTGGCAGGTGTACAGCTCGGCCCAGGATGCTGATGGGCGCTGTGTCTGCACCGTGGTGGCACCGGAACAGAGTCTGTGCTCCAGAGATGCCAAGAGCAGACAGCTCCGCCAGCTACTAGAGAAGGTGCAGAACATGTCTCAGTCCATTGAGGTGCTGAACCTGCGGACTCAGAGGGATTTCCAATATGTCATGAAGATGGAAAACCAGATGAAGGGCCTGAGGACCAAGTTCAGACAGATTGAGGATGACAGGAAATCCATCATAGCCAGAAACTTCCAGGAGCTTAAGGACAAGATGGACGAGCTGAAGCCGTTGATCCCTGTACTGGAGCAGTACAAGATGGATGCTGCGCTCATTTCCCAGTTCAAGGAGGAGATCAGGAACCTCTCAGCAGTGCTGACAGGCATCCAGGAGGAGGTTGGGGCCTTTGACTACGATGAGCTCTATCAGCGAGTCCTGCGACTGGACAGCCGGCTCCGCAGCTGTATGGGCAAACTAACATGTGGGAAATTAATGAAAATCACTGGACCTGTTACAATAAAGACATCTGGAACCCGGTTTGGGGCATGGATGACTGATCCTCTAGCATCGACCAGAAACAACAGGGTTTGGTATATGGACAGTTACACTAACAGCAAGATTGTGCGCGAGTACAAGACGATGGACGACTTTGTAGCAGGGGTGGTTTCCCGAACCTACAACCTCCCATTTAAATGGGAGGGAACCAATCACATTGTCTACAATGGATCCCTTTACTACAACAAGTACCAGAGCAACATAATTGTCAAGTACAGCTTCGAAACAGGCAGCGTGTTGGCCCAGCGAGCTTTGGAGTTCGCCGGCTTCCACAACATGTACCCATACACATGGGGGGGTTTCTCCGACATCGACATCATGGCTGACGAACTGGGAATGTGGGCTGTGTACGCGaccaatcaaaatgctggaAATGTCGTCATCTCCCAGATTGACCCTGACACCCTCCAGGTCACGAAGACTTGGAACACTGAATACTCCAAAAGGAATGCGGGCGAATCATTCATGATCTGTGGGACGCTCTATATCACTAACTCTCACCTGTCCGGAGCGAAGGTTTACTACGCTTACTCTACGAAGACTTCAAGTTACGAGTACATAGACATTCCTTTCCACAACCAGTACTTTCATATCTCCATGCTTGACTACAACGCCAGAGAGAGAGCACTGTACGCCTGGAATAACGGACACCAGGTAATATTTAATGTCACCCTCTTTCATGTCATAAAAACTGATGATGACTCTTAAACATGATACTTTTCCCACCAAAACTAAAGCACCATCGTTTGTGATATAAAAAAGGACCTCCTAATTAACCCTGTTTTCTTCTGTCAAAAGTGGACTATGGTATCTTTAATTGCCACCAGAACTTTTCTAATTCGTGGCTCTGGCTGAATTGAGCATGGATACCAATGACTTGATACTTTACTGAAAACCATGTTCTACATTTTTTACTCCTTTCCATTGCTGCTGATCAGACTGTTATGCCTTATTTGCTATGTGTTGGGTCTGCCAACCAAAGACTGTCAAAAGCTTTTGCATGAATGTCCACATTTTGTCTGCAGTGATTTCCTATGATACAGTGTTTTTGTTGCAAATCTGTATTGCTTACAGtgtttgcatttgtgtctaTTTAAAAGTCtatttaaaagtattgaaaccTTAAAGGTAACCTTTCCTGCATATTTGCCACCATGTTAAGCTATCTGATTATAAAATATAGTAGCCATTCGTTTAAAGATGGGCCTGTAAAATATTGCTGTTACGGATGTATCTGTggaatttgtattttttataaaagaaaaccATAAAAGTATATCTGTGCATTTTcatgaaaattaaaatattgtacatttcattaaaatggtTTTGGCTGGTAAAATGTATATCAGCCATGATCTGATGGAAAAACA
>XM_039789422.1
gcctaataaCTGCTTGTTAGCTAGTTGATAACACGAGATTTAAGCATGTCTAACGGTTGATTTAGCACCCTTTGTCTACCAGAGATgacaagttagctgttagctgttagtaAGCTTATGTTAGTTGTGTATTAGCATGCTAAGGCACTAGCAAAACACAATACTATAGCTTTctgatttatttacatttcacaCAAGTTGCATactgtgtgcaaaatgcagctttagcttaatttacagaCTTATCACTTGTTTACTATAAAGACATCTTAATGACAGCCATGCTCCACCCTCAGCCTTTAGCCATCTTGCTATCATGAACCAGGCAGCCTTTTTGACTCAACTATCGGCCCAAAGGAGGGCTGGCAGGTGTACAGCTCGGCCCAGGATGCTGATGGGCGCTGTGTCTGCACCGTGGTGGCACCGGAACAGAGTCTGTGCTCCAGAGATGCCAAGAGCAGACAGCTCCGCCAGCTACTAGAGAAGGTGCAGAACATGTCTCAGTCCATTGAGGTGCTGAACCTGCGGACTCAGAGGGATTTCCAATATGTCATGAAGATGGAAAACCAGATGAAGGGCCTGAGGACCAAGTTCAGACAGATTGAGGATGACAGGAAATCCATCATAGCCAGAAACTTCCAGGAGCTTAAGGACAAGATGGACGAGCTGAAGCCGTTGATCCCTGTACTGGAGCAGTACAAGATGGATGCTGCGCTCATTTCCCAGTTCAAGGAGGAGATCAGGAACCTCTCAGCAGTGCTGACAGGCATCCAGGAGGAGGTTGGGGCCTTTGACTACGATGAGCTCTATCAGCGAGTCCTGCGACTGGACAGCCGGCTCCGCAGCTGTATGGGCAAACTAACATGTGGGAAATTAATGAAAATCACTGGACCTGTTACAATAAAGACATCTGGAACCCGGTTTGGGGCATGGATGACTGATCCTCTAGCATCGACCAGAAACAACAGGGTTTGGTATATGGACAGTTACACTAACAGCAAGATTGTGCGCGAGTACAAGACGATGGACGACTTTGTAGCAGGGGTGGTTTCCCGAACCTACAACCTCCCATTTAAATGGGAGGGAACCAATCACATTGTCTACAATGGATCCCTTTACTACAACAAGTACCAGAGCAACATAATTGTCAAGTACAGCTTCGAAACAGGCAGCGTGTTGGCCCAGCGAGCTTTGGAGTTCGCCGGCTTCCACAACATGTACCCATACACATGGGGGGGTTTCTCCGACATCGACATCATGGCTGACGAACTGGGAATGTGGGCTGTGTACGCGaccaatcaaaatgctggaAATGTCGTCATCTCCCAGATTGACCCTGACACCCTCCAGGTCACGAAGACTTGGAACACTGAATACTCCAAAAGGAATGCGGGCGAATCATTCATGATCTGTGGGACGCTCTATATCACTAACTCTCACCTGTCCGGAGCGAAGGTTTACTACGCTTACTCTACGAAGACTTCAAGTTACGAGTACATAGACATTCCTTTCCACAACCAGTACTTTCATATCTCCATGCTTGACTACAACGCCAGAGAGAGAGCACTGTACGCCTGGAATAACGGACACCAGGTAATATTTAATGTCACCCTCTTTCATGTCATAAAAACTGATGATGACTCTTAAACATGATACTTTTCCCACCAAAACTAAAGCACCATCGTTTGTGATATAAAAAAGGACCTCCTAATTAACCCTGTTTTCTTCTGTCAAAAGTGGACTATGGTATCTTTAATTGCCACCAGAACTTTTCTAATTCGTGGCTCTGGCTGAATTGAGCATGGATACCAATGACTTGATACTTTACTGAAAACCATGTTCTACATTTTTTACTCCTTTCCATTGCTGCTGATCAGACTGTTATGCCTTATTTGCTATGTGTTGGGTCTGCCAACCAAAGACTGTCAAAAGCTTTTGCATGAATGTCCACATTTTGTCTGCAGTGATTTCCTATGATACAGTGTTTTTGTTGCAAATCTGTATTGCTTACAGtgtttgcatttgtgtctaTTTAAAAGTCtatttaaaagtattgaaaccTTAAAGGTAACCTTTCCTGCATATTTGCCACCATGTTAAGCTATCTGATTATAAAATATAGTAGCCATTCGTTTAAAGATGGGCCTGTAAAATATTGCTGTTACGGATGTATCTGTggaatttgtattttttataaaagaaaaccATAAAAGTATATCTGTGCATTTTcatgaaaattaaaatattgtacatttcattaaaatggtTTTGGCTGGTAAAATGTATATCAGCCATGATCTGATGGAAAAACA

Function

symbol description
olfm3 Predicted to be involved in eye photoreceptor cell development. Predicted to be located in Golgi apparatus; extracellular space; and synapse. Predicted to be part of AMPA glutamate receptor complex.

NR:

description
noelin-3-like isoform X1

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039789421.1 True 2557 mRNA 0.45 7 9029123 9083108
XM_039789422.1 False 2312 mRNA 0.43 6 9029123 9083107

Neighbor

gene id symbol gene type direction distance location
ncf2 ncf2 coding downstream 249301 8768220 ~ 8779822 (-)
LOC120552044 anks6 coding downstream 294304 8724449 ~ 8734819 (-)
LOC120552041 ahrr coding downstream 316370 8639541 ~ 8712753 (-)
snx16 snx16 coding downstream 531109 8476127 ~ 8498014 (-)
LOC120552161 wwp1 coding downstream 611135 8378019 ~ 8417988 (-)
col11a1a col11a1,LOC103148006 coding upstream 4043 9087151 ~ 9173024 (-)
LOC120552183 vav3,LOC102780841 coding upstream 531732 9614840 ~ 9726073 (-)
nrros NA coding upstream 684484 9767592 ~ 9777716 (-)
fbxo45 fbxo45,LOC103356146 coding upstream 703071 9786179 ~ 9790167 (-)
LOC120552222 tmem241,LOC102778472 coding upstream 722397 9805505 ~ 9813890 (-)
G218649 NA non-coding downstream 32735 8996104 ~ 8996388 (-)
G218640 abca4,LOC103369882 non-coding downstream 80036 8948220 ~ 8949087 (-)
G218639 NA non-coding downstream 88394 8939896 ~ 8940729 (-)
G218614 NA non-coding downstream 155963 8872952 ~ 8873160 (-)
G218588 NA non-coding downstream 232424 8796497 ~ 8796699 (-)
G218671 NA non-coding upstream 44914 9128022 ~ 9129646 (-)
LOC120552334 NA non-coding upstream 90994 9174102 ~ 9185369 (-)
G218735 NA non-coding upstream 213929 9297037 ~ 9297238 (-)
G218739 NA non-coding upstream 291751 9374859 ~ 9375212 (-)
LOC120551892 NA non-coding upstream 331858 9414966 ~ 9415451 (-)
LOC120551928 LOC104943218,LOC103369878,LOC100710535,LOC102301415,LOC101469805 other downstream 58485 8957409 ~ 8970638 (-)
prkdc prkdc other downstream 177397 8797781 ~ 8851726 (-)
G218471 NA other downstream 598193 8430464 ~ 8430930 (-)
G218453 adarb2 other downstream 833244 8194929 ~ 8195879 (-)
G218085 LOC107687935 other downstream 3328547 5700229 ~ 5700576 (-)
cngb3.1 LOC103363254,LOC102786718,LOC108428960,LOC104948783 other upstream 750354 9833462 ~ 9848241 (-)
G218950 NA other upstream 1494291 10577399 ~ 10669527 (-)
LOC120552013 NA other upstream 1521212 10604320 ~ 10615221 (-)
bloc1s5 bloc1s5 other upstream 1781177 10864285 ~ 10868787 (-)
pign pign,LOC104945957,LOC102796964 other upstream 3334240 12417348 ~ 12433035 (-)

Expression


Co-expression Network