gad2 (gad2)


Basic Information

Item Value
gene id gad2
gene name gad2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 21464099 ~ 21484174 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039789436.1
ACAGGGGAGAGGGACCAATGCGCACCAAGTCTCCTCGCCGCTCCACTGCTTCCTCCACCAGGCGCTCAATTAGAGCAGCCGGTCTCTAAGAAATAGGTCTGCAATTGCCGGCAGATGCATTAGTTGGCATTCACTGTCTGTATGGAGGcacaAAGCGTCTATCGGATGCACGGCTGGCTTTCCAGCAGTCGGAGAGCTCTGGTCAGATTCAGCACTACATCAGCTTTGGACAGCTCCGCGTGGATGGGCTCTGTCGGTCTCCGTGTCTCCAGCAGCTCCTAACTACCGGCAAGAATGGCATCGCAGGGTTTCTGGTCTCTTGGCGGAGATAATGCGGGGGCCAATAATACCGGGAGTCAGAGCCCCAGTACACCCAGGGCTTGGTGCCAAGCGGCGGCCCAGAAATTATCCGGAGGAATTGGATCGAAATTATGTGCGCTGCTCAATGTCGGGGAAGTGGAGAAGCCCGCCGAGCCGGCCGCCAAGCAGCCGCCGGAGACCGAGGCTGCTGGCACCTGCGGCTGCAACAAATCGTGCAACTGCACCAAAGCTGCTGTGGTCTTCTCCGACCTCTATTCAACAGACCTGTTACCTGCCATGGACAGTGACGCCAAAACAATGACCTTCCTGCAGGAAGTTGTGGATATTTTACTGGCCTACATCGTGGAGTCTTTCGACCGGGACACGAAGGTTATTGATTTTCATTATCCCAACGAGCTGCTTCAGATGAACAACTGGGAGCTGCAGGGCGAGCCGGCCTCTCTGGATGATATCTTGATCAGCTGTCGCGCTACTCTCAAATACGCCATCAAAACAGCCCACCCCAGGTACTTCAATCAGCTCTCTACAGGATTAGACATGGTTGGGCTAGCAGCTGATTGGCTAACATCCACTGCCAACACCAATATGTTCACCTATGAGGTGGCTCCTGTCTTTGTGCTGCTGGAATACGTCACTCTGAAGAAGATGAGGGAGATCATTGGCTGGCCGGATGGGCGAGGAGATGGCATTTTCTCTCCTGGTGGGGCTATTTCTAATATGTATGCCATGCTGCTGGCTCGCTTCAAGATGTTTCCTGAAGTGAAGGAGAAAGGAATGTCATCGGTTCCCAGACTGGTGGCCTTCACATCCGAACATAGCCATTTTTCAATCAAAAAAGGTGCTGCAGCTCTTGGCATCGGGACAGAGAGTGTGATCTGCATCAAAGCAGATGAAAGTGGTAAATTGATCCCAGGTGACCTTGAGAAAAGAATACTGGAGGCTAAACAGAAGGGTTTTGTTCCTTTCTTTGTAAGTGCAACTGCTGGAACAACAGTGTACGGAGCTTTTGACCCTCTCATCGCCATTTCTGACATCTGCAAAAAGTACAACATCTGGATGCACGTTGATGGTGCGTGGGGAGGAAGTCTCCTCATGTCCCGGAGACACAGGTGGAAGCTGGATGGAGTTGAGAGGGCCAATTCAGTAACATGGAACCCACACAAGATGATGTCAGTCCCTCTGCAGTGTTCAGCCCTGCTGGTCAGAGAGGAGGGTTTGATGCAGAACTGCAACCAGATGCACGCCTGCTACCTGTTCCAGCAGGACAAACACTACGACCTGTCCTACGACACCGGAGACAAAGCGCTGCAGTGTGGACGCCACGTAGACATCTTCAAGTTGTGGCTCATGTGGAGAGCTAAGGGCACCATTGGGTTTGAGGCTCAGATTGACAAGTGTTTGGAGCTGTCGGAGTACCTCTACAACAAGATCAAAGACAGAGAAGGATATGAGATGGTCTTTGATGGGAAACCTCAGCACACCAACGTCTGCTTCTGGTACCTCCCTCCTGGGATCCGCTACATGGAggataaagaggagagaaagaaacactTGCACAAGGTGGCTCCAGTGATAAAGGCCAGGATGATGGAGTACGGGACAACCATGGTCAGCTACCAACCACAAGGAGACAAGGTCAACTTTTTCCGCATGGTGATCTCAAATCCCGCTGCTACCTTCCAGGACATCGACTTTCTTATTGAGGAGATTGAACGACTCGGCCTGGATCTATAAGACTCATCTCACCAAGTCCTCCTGTACTTTTCCCCTTGAAGGATGAATTGTTTGTCGTGAATGTACTGgtaaactttttattttctctctctttcctccaaaGTCACATATTTAAGAGTATatttgaggaaaaaaagatCTACAGATATATCCATACATTATGTATTGTAGCTTTGCCGTGGACTAACTTGGTCCAAAGCTATGTAAAAGTGCTTCTGTCTGCCTTTCCTATAGTGTAGTAGATTTCAGAGTAGTGGAAGTGATGTAACTTTATATGTACTTTTTGTGATATGAAATGCTTGTGCAATAGGTCGATGAGGaagagttttattttaattttatttataatttaattattaCTCATTTGCCGAGTATGTTGCCAAACGTGGTTGTGTTCTATTgtaactttacattttaaacttctggtttaaaacaaaaaaagcacttCACCTTACCTCAGCTTAATCAACTGCCTTTACGTCTGCACATACTACTCCAAGCAGTGATCTTTGGACAATATTCTCTTGACTGGTGATGCATAGCAGCATGTTAAAGAAATATCCATACCAGAACAGGCCGTCATAGGGATTTTGAAATATGTACAAAATAAGGCATTTCCATCATAATTACACAACAGCAAAGTCAATTCAAAGCATTTATTAAGGCGTGTGGTTCCATCGTGCATCACATCGGCTTTTGACAGTTTGGTCTGCAGCTTATGATGCTAATTTAATATCACAGCTTATTACTTCTAATACTTTCTActctttttacacacacacttctttctAGTGTAATTAAGGTGGTAAAGGCTTGTTGAACCCATTTTGTTTGATGCCACCAGCTACATGTACATATAAAAATGGATACCATTTCCAACCAGGCTGTGTATTTAGCTGTGCTGAGTGTGCTTTACATGTTGTAGTGATGATCTAAAATGAGAGTACTAACATTACAAGAGTATTACAAGAGGTAACGttaccattttctttatttgaaaccACATTTTTGCTACGATTAACCAATATTTGTTTAGCCATTCAAAATATTTGGAGTTTTTAATTGCCTCTCTTTATATTAGTATTAATTGTTAGTGGCGGAGTCTGCCTTTACCAACCGGAATTCAAATTGCATAACCCACGCACAAGGGGACATTTAATTTGACCTAATGGATCAAATTGTGATAACACAAAGTATCATGTCAGAGTGTGTGGCACTCAAAACTAATTTAGTCATCATCTTGTTTTTTGTGGAATTATTGTGTATGAGAAGCAAGGCTGGATCACCAACTGGGCAAATTGGTTAACTGCCAAGGGGCCCCAGGCCCTGAGGGGCCACCAAAGTGCTGAGTTTACTGCACGTCAACTGGTTTTGATTAATCGCAAATTTGCCAAATTTAAGAACAATGTCAACATGCCCTGCATTCTTAGCAAAGCTTGTGGCCATGTCTTCTAAAGTCGCGTTTCCACAAAGCAGTCGAGTTCAGTCCGGTCCAGTTAAGTTCGTTAAAGTTATGGATAGTACCTGGTCCTTTTTTTGGTACCACCTcggtcgaggttccaagcgagctgaacCAATACTAaaaggtggagttaaaacaATGCAGACCAATGATTGGTCAGAGGGAATCCTCACAAGTGCGACACGCGACATCATGCACAAACCCCACCTACCAAAGAGCGGTAGGTGGGGGTCAGTAGCGGCCCAACAGCACATTCTTGCCCCTGGGCCTACTGATGAATCGATCCAGCCATGATGGGAGGCTTTTGGGGCCAGTGGGCATCACATGACAAGCAAAACCGACTGTGGCCACAACTCCAAAATCCCCTTGCAGCCCATCATTGTGCCTATCGGCTCTGTCACACACTTGCTGTTATCACAATACAATTTTAAGGATTAGAACTTTAAAGTTGTAAATCGTCTCATCTACAGTAACATGACAAGAAAAGCTATTTGTCAGGGGTGTTTTTGGATGAGCAACTAAAGAAAGATCGAGGATCTTACGAAAACTGGGAACGGGGCAAGAATGGTGTTTTGTCTGAATATTGGAACTTCACCAGACCTACTGCATACCTGACATCACTTGCACTAAATCATCGGGGAAGGACGAGCGTTCCTTAGCTTTGCAACTGAGATTCCTTCTTAATTCATTCACAAGCAATATTCGAGAATGGGTCCAATCTATATACCCTGCACAATATCAAAAGAAACGGTGAATTGAAGTGTACAATAGTTAACGATAATCAAGTTTGCTACTAGTTAgccaaaaactaaaaacatgcTTACGGTAGGCAGGTTAGTTGATGGAATGTGAACCCTGATTGAACAAGCAGAGGTTCTGTAGCATTTTCATTAGAAGTTAGAAAAGCACAATTTGCTCAACACGGTCGCTCAGTGTACAATCACTTTTGATCATAGATTGTAAATAGTATTTCAAGATGTCCTAAGTACATATCTTTGTGTATACATAAGTGTATATAAGACATATAACCAGAGACTATTTGTGAGGTAAAGTTATTCATATTTTCTCTATCTCCAATATAGATTACCTGTATTTTCATCCTGTTTGTCCAAAAGGCttttttcctctgtgtgtgtgtgtatgtgtgtatgtgtgtgtgtgcgtgcgtgcgtgtgtatgcgtgtgtgtgcgtgtgtgtgtgcgtgtatatgtacagtacagtatgtatgtcaGATACTTGACTTGGTTTGTGGCTCTTCTAGCTATTTCAAGGAAAACGTGTTTCAGTGACATGGCTTTAAAGAAACCTACCAGATTTCACTTCGAATTAACTCGGTGATTGGATTTTAAGTGAATATGCAAAGCCATTTTGACTCTGAAGCCCTGTGTTTTTTGTGCACAAAGTAAATACTTGACGGTATGTCAACGTGCCAATGTGTACCTTAGTGTGTTTGTAACTGTGTTGCCTTAGTATAAATTTGGCAGTATTGTCTAGTTTTCCTCCAAAGAGGAGGTTGTGCACTTTAGAGTATACTACATGACCTAATAACGTGCAATGTCCAATGGTTGTTCATAagttgatgttaaaaaaaaaagaaaagaaaatatcctCAAAAATGTAACTTAAGCTCTTTGGTCTGAATGTGACTTGAATCAAGGGTCTGTTGGAAATCAAAGCATTTAATTTTTTGCAGTGTAttgtattataatatatataagttTTAGTGTATTACGTCCTAACAGAGATTagcctccaaaccatacgaccacATAGGTCGGttgttcctaccctctaatacagtggttctcaacctttttggtCGTCCCCAACCATGTTGCGACCCCCACAAAATTATCTCGCCACCCTTTTGGTCCCGACccccaggttgagaaccactgctctaataCTACCAATGGGAGCCTTTCCTAATTTGGCCCCCCCAAGCAGTTTTAAACATGTGAAACAGTTGCactttggttaggtttaggcacaaaaacgacttggttaggtttagaagAGGATCGAGGTTTGGGTTTAAATCAGTACATTTGTTACGTTACTTCATGTCATGCGTTCGTTCATGAGGTGATTACGCATGTGATGGAGAACGTGATGTCATTCCGTTTGTTATGTAAAGTTGAAATGACCcattgtttacttttatttttaaacggGACACGAACACCagtctcctgggtaaaagtcctaTTTGTTTAACCCTTCCACCTGTCCACCCTTAACAGACTTCCGTCTTAATACCACATTACatgacttcctgctttgctgtCGTCATAATTACTATGGCCTTTAGAGGGCGGAGACTAACATTGAAACATAAATGGgttgtaattgctgcttgtacaAATGACCTATGGGGCCGTTTTttggggggaggacagtctcagaGTTTAACacacttttaagatttattaATCCAAATTCTGTTTCCAGATAAAATTGGCGTACACACTGTGACACAGACGACATCAGATTTATTACAACGACACAGGAATCTCGCTACGGTGGTCTCGGAAAGCCAGACATTTTCTTctcttgttgctgctgctgctagactTGCTTCCTTTGCACGTGCATGCACTGCCTTGCCTATCCAGCTTGTTTGATATCTCCTATCCTATATATCtatttctatatatatacatatatacatatataaagtcTGTGTAGCTCCTGTAATTAGCTTTAGTGTCCGACGTATAGCTTTAGCCTGTAGATCAGTGCACTGTCGCTCTAGCCTTTACATGTGATTCTATGTCTTGGGCTTCCTGTAAAGTTTCTCCGTGCCGCAAGCATGCTAACCCCGCCAAGCATTGTATTCCTCTCCGCGCTTGATCTGACTATCTCTATCCTCTGTCTTTTCTTCCTCTGCTTGAAGACTGTCGCAGCTCAGAACGTAGAGTATTATATCTATATATGTGTAGTCCCTCAGCATGTCTCTATGAAAGCTTTTCTCTGCTCTgcaacttttcgaccttttctctctttctcttccgcTTCGCTCTCTGGTAGCAGTGACGACGTATCCTCGTGCGCTTTCCTCTTAACGTTTCTCGGCTGCCCGCTGTCGTTCCGTCTGTGTGTCTGAGATGGTGTGTTGACTCGTGTCATGGTACAATAACTGTCACTGGTTCTGATTTTGTTTCACCAAGGCCCTTGACTCTATGGGATGTATGAGAAACAGAATCAACAGGATTTAGAATTGATTGTCCAAAAACTTTGTCCAATGTCCAATGCAATGTTGTTAGCTTTCATCACACAAGTATAGAAACAAATACCCTGGTTTCTTGCTTATGGgaaatattgtttgtttatgaGAATAATTACAATCCCTAGTACTCAGAGTGCAGTTCACTTTCACTAAATATGGTATGATTTTGAATCATATATTCTGCAAACTGCTGTGCTAGCTTCTCTCAAACATTAATTTTGTCCTGAACTATATGTTACTATTGagaaagtagaaataaatattggtcaaaacaaa

Function

symbol description
gad2 Predicted to enable glutamate decarboxylase activity and pyridoxal phosphate binding activity. Acts upstream of or within gamma-aminobutyric acid biosynthetic process and neurotransmitter biosynthetic process. Is expressed in central nervous system; eye; and neurons. Human ortholog(s) of this gene implicated in gestational diabetes; schizophrenia; and type 1 diabetes mellitus. Orthologous to human GAD2 (glutamate decarboxylase 2).

NR:

description
glutamate decarboxylase 2

GO:

id name namespace
GO:0042136 neurotransmitter biosynthetic process biological_process
GO:0009449 gamma-aminobutyric acid biosynthetic process biological_process
GO:0030170 pyridoxal phosphate binding molecular_function
GO:0016831 carboxy-lyase activity molecular_function

KEGG:

id description
K01580 E4.1.1.15, gadB, gadA, GAD; glutamate decarboxylase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039789436.1 True 7023 mRNA 0.43 17 21464099 21484174

Neighbor

gene id symbol gene type direction distance location
LOC120552736 apbb1ip coding downstream 21523 21413132 ~ 21442576 (-)
pdss1 pdss1 coding downstream 70483 21386640 ~ 21393616 (-)
acbd5a NA coding downstream 134296 21321300 ~ 21329803 (-)
LOC120552199 yme1l1 coding downstream 151186 21303789 ~ 21312913 (-)
pks1 NA coding downstream 163605 21292784 ~ 21300494 (-)
myo3a myo3a coding upstream 1048 21485222 ~ 21545450 (-)
LOC120551882 LOC104933965,LOC103370911,LOC101468576,LOC102294681 coding upstream 80695 21564869 ~ 21574510 (-)
anxa13 LOC107081825,LOC103456771,LOC105935762,LOC106515547,LOC103140553,LOC103370912 coding upstream 91432 21575606 ~ 21587153 (-)
LOC120552336 NA coding upstream 106770 21590944 ~ 21598756 (-)
gpr158a gpr158 coding upstream 120541 21604715 ~ 21689934 (-)
G221616 NA non-coding downstream 46092 21415951 ~ 21418007 (-)
G221604 abi1 non-coding downstream 91408 21345698 ~ 21372691 (-)
G221582 NA non-coding downstream 143689 21319890 ~ 21320410 (-)
G221567 NA non-coding downstream 162052 21301484 ~ 21302047 (-)
G221551 NA non-coding downstream 193690 21269442 ~ 21270409 (-)
G221695 NA non-coding upstream 247113 21731287 ~ 21731487 (-)
G221708 arhgap21 non-coding upstream 330322 21814496 ~ 21815723 (-)
G221712 LOC104936438,LOC103366385 non-coding upstream 347982 21832156 ~ 21832884 (-)
G221768 NA non-coding upstream 460196 21944370 ~ 21944690 (-)
G221793 NA non-coding upstream 607367 22091541 ~ 22091753 (-)
rbis LOC101064519,LOC103367294,LOC102312013 other downstream 242432 21217680 ~ 21221667 (-)
LOC120552536 fbxl7 other downstream 601411 20835178 ~ 20862688 (-)
G221048 ankh other downstream 2137205 19315591 ~ 19326894 (-)
mettl4 mettl4 other downstream 2514604 18938913 ~ 18949495 (-)
LOC120552352 colec12,LOC102798044 other downstream 2653155 18772977 ~ 18810944 (-)
tfr1b NA other upstream 505843 21990017 ~ 22011086 (-)
LOC120552473 NA other upstream 630208 22114382 ~ 22120611 (-)
smpx smpx other upstream 718593 22202767 ~ 22218381 (-)
LOC120552322 cdh12,LOC108234660,LOC100695194,LOC101477368 other upstream 1917369 23401543 ~ 23519526 (-)
avl9 avl9 other upstream 3312415 24796589 ~ 24854888 (-)

Expression


Co-expression Network