mrc1a (mrc1)


Basic Information

Item Value
gene id mrc1a
gene name mrc1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 18741999 ~ 18754600 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039789519.1
ccctagcACACAGCAGACTCCTTCTCTCATGACTGGAAAACTCTCCTATAACCTCATCCAGCACTGAGTGCAAACCACACACTAAGGATAATGCTACCCTGTTCAAATGTCGCTGTGGTCCTCTGTCTCCTGCAAGTCCTCTGCATTACTGCAGACATAGACAGTGGCTCCTTCCTGATCTTCAACGAGAACCACAACAAGTGCATAAAGGTGGAGAGTGCCACCTCCATCACGGTGGCTCCCTGTGATCCTCATGCCAAAGCGCAGCAGTTTCGTTGGGCCTCCGAATCGCGCATCCTCAGTCTGTCCCTCAAGCTCTGTCTGGGGGCCACAGAGATTAAAGACTGGGTGAAGGTGCTCCTCTTTGAATGTGATGAGAATAGTGAGCTCCAACACTGGCAGTGCAAGAATGAGACCCTCTTTGGCCTAAAAGACCAGGACCTGCACTTAAACTGGGGCAACCGCAATGAGAGGAACATAATGATCTACAAAGGGGTAGGGCTCTGGAGTCGCTGGAGGATATTTGGCACCCGGGGTGACCTTTGTTCAAAGGGGTTTCAAGAGGTTTTCACGATAGGGGGGAATGCCTTTGGAGGCCCCTGTCAGTTCCCATTTAAATTTGGGGAGAAGTGGTTCGCTGAATGCACAAAGGAAGGTCGCTCAGATGGACAACTGTGGTGTGCAACAGAGAGAGATTACAATAAAGTCAAAAAGTGGGGCTTTTGTCCCACCGGAGTATCCTCAGGTTGGGACACTGACCCGGTCACAGGGGTTCAGTATCAGAGGAACGCACAGTCAGCGTTGACCTGGCATCAGGCCAGGAAGAGCTGCCAGCAGCAGGGAGCCGACCTTCTCAGCATTGTTGAGCTACATGAGCTGTCATACATTTCAGGGTTGACACATGCGTTGGGAACATCTCTGTGGATTGGACTGAACAGCTTGGATTTTGAGAGTGGATGGCAGTGGAGCAACGGAAACCCGTTCAGATATTTAAACTGGGCCCCAGGCCATCCCTCGTCAGAGCCCGGGCTCACCTGTGCAACCCTAAATGCTGCAAAAGCCTCAAAATGGGAGAGCAACGCATGCACCAAGAAACTTGGTTACATTTGTCGCAAAGGAAACTCTACCAGTCTGCCTCCACCACCAAACAAAGACCAGCCCAGCTTCTGTCCCAGTCACTGGGTTCCATATGCAGGTAACTGTTACTACCTGCAGAGGAGTAAAAAGATGTGGAAGGACGCTTTGGCTGCATGTCACAAAGAGGGTGCAGACTTGGCCAGCATAAGCAGTATAGAAGAGCAGAGCTTCATAATATCTCAGTCTGGATACTTGTCGACAGATGTGCTCTGGATTGGCTTGAATGATCAGAGGAACCAGATGCTGTTTGAATGGTCCGATCACTCCCACGTTACCTTCACCCAGTGGCAGACTGGTGAGCCATCTCATGCCACCAACCTCCAGGAAGACTGTGTCCTCATCAGAGGAAAGGACGGGAGGTGGGCTGACCACATGTGTGAGAAGACGTATGGATACATCTGTAAGAAGAAGGCCTCCACTAAACCACCTGAAGGCACCCAAGAGGAAGCCAACCCGGGATGCAAACTTGGCTCAATCAGGTTTGGTTCTTATTGTTACAACATTGGATCTGAGACAAAAACCTTTGATGAGGCAAAGCTGGCATGCTCAGAGGCTGGCGCTAACGTGGTGGATGTGGCTGATAGATATGAGAATGCCTTCTTGGTCAGTTTGGTGGGTATGAGACCAGAGAAGTATTTCTGGACAGGTTTTTCCAACACAGACGACATAAACACTTTTAAGTGGACCACCAGAAGAAAAGTCACATTCACTCATTTCAATGTGGGCATGCCAGACAGACAACAAGGATGTGTTGCCATGACAACTGGGATTTTTGCTGGATTATGGGATGTTGTCAGCTGCAGCAACAAGGAGAAGTATATCTGCAAGAAACAAGCAGAGGGTGTTCATGTGACAACAGTCCCACCCACCACCCCGGCCCTGAGCTGTGAGTCTGGGTGGACCCCCGCTGCCAAGAGGAACGTCTGCTACAAAATTTACAAAAAGTCAGCGAGTCTTAGGAAGACTTGGCATGAAGCGAAGGACTTCTGCAAGGCCATTGGTGGAGACCTGATGAGCATACACAGTATGCAGGACCTGAGCAACGCTCCGTTTCATTCCTCTGAACCAGTCTGGATTGGCCTCAGCCTTGGTACCAACGCGGGTTTTGAATGGTCCGATGGGTCGCCTTTCGGCTTTGAGAACTGGAGCTTTGGGGAACCAAACAACTACAATGACAACGAACACTGTGCAGAAGTCCACTTTTACTACGGGCGGCACTGGAATGATAGGCACTGTGAATCCTACAGTGACTGGATCTGCCAGATACGCAAAGGTGTGACCCCCAAACCTGAGCCTGTCATAGTTGCACCAGTATACAACACCACAGAAGATGGCTGGATAATATACAATGACACACAGTATTTCATCAACAATGACAAGTTAGACATGGAAGCTGCTAGAGCCTTCTGCAAAAAGAACTTTGGTGAACTTGTGGTCATCACTGGGGAGAGTGAGAGAAGGTTCCTATGGAAACAGATAGTGAAAGGCACAGAAGGACAGTACTACATTGGCCTGACAGTGAATTTGGATAAGTCATTTAGCTGGCTGGATGGCACCCCTGTATCATACACCGCATGGGAACAGAATGAGCCCAACTTTGCTAATAATGATGAAAACTGTGTGACTTTATACAAGAGCATGGGGTACTGGAATGATATTAACTGTGGTATGGAGCTTCCTTCTATTTGCAAAAGAAGCAGTAATTTTATTAATACAACAATGGCCCCAACCACTATTCCTAAGGGAGGATGCGCACCAGAGTGGCTCGCTTTCCAAGGAAAGTGCTACAAAATAGTTGTGGGAGATGACAAGAAGAACTGGCAGGAAGCCAGGACGTACTGCTTAAACCAGGGAGGAAATCTGGTTTCTATCGTCAATGAGAGAGTGCAAGcATTCCTTACAACGCAGATGCTGAGATACGAAGACGACTTCTGGATCGGCATGAATGATGTCAACTGGGAGATGCACTTTGTGTGGACGGATGGCAAAGGCATTTCATACACCAACTGGGCAAAAGGGCATCCAACAACAGTGCCTAATGGACGTTATTCATTTATGTCTGAGTCATTTGACTGTGTGGTGATGGTGGGCAGCATCACAAAAATAAAAGGATTCTGGAAGGTGGAAGACTGTGACTCCAAACATGGCTTCATCTGTAAAAGAAACATTGATTCTCAGATTGTAGTCCCAGCCACAACTGTGTTACCAAAGGCTTTCTACAAACTTGGCAATGACTCCTACAAACTGGTGGCCCAGAAGATGAGATGGGATGAGGCGAGGAGGCAGTGCCAAGCAGACGATGCAGATCTGGCCAGTATCCTGAACCCCGTCACCCAGGCATACATCACCTTGCAGATTTCCAAGCACAATGAGCCTGTGTGGATCGGCCTCAACAGCAATGTGactgGTGGGCGGTTCCAGTGGGTCGATAACTGGCTGCTGTCTTATACCAAATGGGGCGCAAATGAACCTAAAAACAACTTTGGCTGTGTGTATATGGACGTGGACAGAACATGGAAGACTGCACCATGCACCGATACCTTCTATTCCCTTTGCAAGAGGTCACCAGACATAGCACCCACAGAGCCCCCACAACTCCCTGGAAACTGTCCAGAACCAAAGAAACGGAAAACCTGGATACCTTTCAGAGGCCATTGTTATTACTTCCTCAGCTCATTGGTCGACAACTGGGCCCATGCCTCAGTTGAATGTCTGAAAATGGGTGCTTCTCTGGTGAGTATTGAGGACCCTCAGGAGAGCCTGTTCATACAACAGAACCTGGAGCTTCTGCAGGACGGTGCCAAGTCCTTCTGGATCGGCCTTTACAAGACTCATGAAGGTGAGTGGATGTGGATTGATAACAGTGTTGTGGACTACGCCAACTGGAAAACGGGGATGCcaaagtcagaatcatgtgtggACATCGATTCTGACAGTGGACAGTGGAGTACAAACAGCTGCAGCAGATACAGGTCTTACATCTGCAAAACAGCCAAAGTTATTACACCTACAGAAAAGCCCCCATCTGTTGCCCACGTCGTTAAAGAAGCTTCTCATGGGTCTGCTGGCATCACTGTGGCTGTAGTGCTAGTTGTAATCGCCGTAGTTGGACTCGGTGCCTTCCTCCTTTTCCGTAAACGGATAACCACCCCTGTCTTGGGAGAAAGCACCTTTGACAACAAGTTATACTTCAACAATCCAATCCGAGCCCATGTAGACACCAAGGGTCTGGTGGCCAACATAGAGCAGAATGAACAAGCATAGAAAGACTTGATATCAGTGGTAATCAGCACTGTGAACATGATATGATTATGGTTTCATACTTTATTTTGGATCACTTAACTGGGAACTGAATCTCCATCAAACCCTGTAGTGTTTTACCATTTAAAGAGGACAGGATAATGATTcataattattatataataattcatACAACCACTGGCACTGCACTAAGTGAATTAAGGAGAAGATAATATAAGTGAAAATTTTACAACACATTTTACATGATTATGTAATTTGTGAAATGtgtacattttatgttttacttatCCACCAATCAGATTAAGATTTTGAACATTTGTAGCGCAAGCTCCAGTTAAAAATCAAGAGGGTGAAGATTATTCACACAATTATCAGATTTTTCTCAACTGGATTTCTTGTTATTATTCTCCATGGGCTGCTCATCAGCCTATTTCTGGCTTACAACATTGTAAATAGATGCTCAATAAAagaaatgaaacaaacaaaactgaat

Function

symbol description
mrc1 Enables cargo receptor activity. Involved in receptor-mediated endocytosis. Located in endosome membrane and plasma membrane.

NR:

description
PREDICTED: macrophage mannose receptor 1

GO: NA

KEGG:

id description
K06560 MRC, CD206, CD280; mannose receptor, C type

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039789519.1 True 4891 mRNA 0.47 30 18741999 18754600

Neighbor

gene id symbol gene type direction distance location
LOC120551919 slc39a12 coding downstream 1913 18731524 ~ 18740086 (-)
cacnb2a cacnb2 coding downstream 13400 18659277 ~ 18728599 (-)
arl8 arl5b,LOC103373092,LOC100708858,LOC106590131 coding downstream 93374 18640257 ~ 18648625 (-)
trnar-ccg_3 NA coding downstream 117201 18624726 ~ 18624798 (-)
chmp4c chmp4c,LOC107086476,LOC106961905 coding downstream 121035 18617665 ~ 18620964 (-)
LOC120551921 tmem236,LOC104961611,LOC102297878 coding upstream 1753 18756353 ~ 18762846 (-)
enosf1 enosf1 coding upstream 67382 18821982 ~ 18826882 (-)
LOC120552191 yes1 coding upstream 76987 18831587 ~ 18853616 (-)
LOC120552316 lpin2 coding upstream 234581 18989181 ~ 19005165 (-)
myom1b myom1,LOC100698284,LOC102794243 coding upstream 252043 19006643 ~ 19036833 (-)
G220860 NA non-coding downstream 1383 18740417 ~ 18740616 (-)
G220839 zfand1 non-coding downstream 118614 18622691 ~ 18623385 (-)
LOC120552692 NA non-coding downstream 163922 18472125 ~ 18578077 (-)
G220732 dnajb6 non-coding downstream 527610 18207365 ~ 18214389 (-)
G220742 dnajb6 non-coding downstream 540481 18188724 ~ 18201518 (-)
G220888 NA non-coding upstream 61306 18815906 ~ 18816378 (-)
G220893 NA non-coding upstream 75151 18829751 ~ 18829985 (-)
G220972 NA non-coding upstream 285665 19040265 ~ 19043216 (-)
LOC120552156 NA non-coding upstream 562054 19316654 ~ 19317227 (-)
G221086 NA non-coding upstream 617991 19372591 ~ 19374516 (-)
G220833 NA other downstream 44029 18610236 ~ 18697970 (-)
si:ch73-174h16.4 LOC103364270,LOC104947970 other downstream 258223 18426762 ~ 18483776 (-)
G220412 csrnp1,LOC104937158,LOC102793366 other downstream 1866699 16874649 ~ 16875300 (-)
LOC120552205 LOC100711537,LOC102295084,LOC108230444,LOC106948898,LOC103140410 other downstream 1946875 16782072 ~ 16795124 (-)
drd3 drd3 other downstream 2457264 16266303 ~ 16284735 (-)
LOC120552352 colec12,LOC102798044 other upstream 18377 18772977 ~ 18810944 (-)
mettl4 mettl4 other upstream 184313 18938913 ~ 18949495 (-)
G221048 ankh other upstream 560991 19315591 ~ 19326894 (-)
LOC120552536 fbxl7 other upstream 2080578 20835178 ~ 20862688 (-)
rbis LOC101064519,LOC103367294,LOC102312013 other upstream 2463080 21217680 ~ 21221667 (-)

Expression


Co-expression Network