LOC120551945


Basic Information

Item Value
gene id LOC120551945
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 1198609 ~ 1200210 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039789542.1
ACATACTGGTATTGTACCTTTTTGAACACAGCACATTCCTGAAAAACACTCATTCTGATGCTCTGACACTCACAGCACAGTCCTTGTTTTCTTTACACTGAGGAACTGTTGACATTCCTCTGTGACTCAGAGCAGTGtgctcaggcacacacatacaggagcAGAGTGCTGTGATATGCACACATGATGGAGCAGCACGAGAAACTACTGAAATGGTACCCTCCGAGGAGATTCGGGGGGTCCAAATTTGTACTGAGTTTATTCTTCATTACTGCATTTGTGATTTTTGCATTCGTAATGTTAGAAAGATATGATAAACCGCTGACTGAAGTAACCATTTTTTCCAACACCACTTCTCccaatgacacagacacacccagacacactaGGAACACCAGTGAGGAGCATGGGAGGGGAAAGCGAGTGACGCGTTCCACAGTTTCTGCGTCTAGGAGTAGATGGCGTTCAGAGTACAACAGGTATCACAGAGCTAATGTTACTATCATGGTCAACACTACATCCACTCTTATGCTTCAGCCCTGTGACTTTGTGTGGTGCGGGGAGCATGGAGCatcagtaggagagagagaggtatatgTATGTTACATTGCAGAGGTGATGGATTTAGGTTATTACAGAGAAGGAGGACCCTTATGTTCCTCATGGAAACAAGCTGTTTGGTATACAGGTAATGCAGATTGGGGCTATGAAGTTCCTAACGACCACACAAACCTAACCAATAGATTATCAATAAAGAAGGTAAACTATTCCTCAACAGGCATCTTGTTAACATTGACCAATGCTCAGTATTCGGACCAAGGTTACTTCGTTGTGTGTATTATGACCTTAGGGAGGCTTCCCTGTGGATCTTTTTATCTTGAAGTAATCTCACCTTCCACATCTCACACAGAATCACCACATTTGACGCAGACTTTTGAAAGTTTATCTAACAGATGGGGATCTTCTGAGGATAATGATGCATTCTCCACTAATGCATGGCTTGGCCTAGTTAAGAAGTTCACGCGTGATGTAGGGTATAATGACTCTTGTTATGTATGTTCACTATTTCCCCACTCTCAGAAGCAGGCTACCCCAGTAAAACCACACACATTGAATCTCACAGAAGTTGTCTGTGCTCTGACAGCACTCAAGGATGTTAGAGAGGAGGGGGGTCAGTTCTATTCGGCTTTTATTCAACCTTCACCTTGTGGAGGTTTTGCGAATCGCACTGTGCATGCTCCGAATGgtactatttttaaaactaaaaatggAAAAGCATCTGATAGTATAGGACAGTTTCACCATAGCCTTATGAAATATTAGTGCATGCTTACACTCCACACCGGGGTATCTTAGTGCTTCAGTACTGATACCATCTTTGACTCACACCATGCGTTGGCCTGATGATTCTGGCGCAGGGTCTCTTGTGGATTATGTTTGGCTCTGTGGAGACCATTGGTATCAGATTTTGACTTCACGATGGGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039789542.1 True 1487 mRNA 0.44 2 1198609 1200210

Neighbor

gene id symbol gene type direction distance location
vstm2a vstm2a coding downstream 796783 294311 ~ 401826 (-)
LOC120551939 NA coding upstream 121228 1321438 ~ 1332410 (-)
ift74 ift74 coding upstream 307526 1507736 ~ 1536190 (-)
kcnh2b kcnh2,LOC102205662,LOC101467662 coding upstream 622833 1823043 ~ 2201660 (-)
zeb1b zeb1,LOC102790219 coding upstream 1601356 2801566 ~ 2860283 (-)
map3k8 map3k8 coding upstream 2012347 3212557 ~ 3220234 (-)
G217267 NA non-coding downstream 333809 864570 ~ 864800 (-)
G217259 NA non-coding downstream 413036 785271 ~ 785573 (-)
G217247 NA non-coding downstream 504185 693504 ~ 694424 (-)
G217241 NA non-coding downstream 615676 582699 ~ 582933 (-)
G217240 NA non-coding downstream 621062 566666 ~ 577547 (-)
G217330 NA non-coding upstream 154015 1354225 ~ 1354503 (-)
G217421 NA non-coding upstream 634003 1834213 ~ 1887417 (-)
LOC120552172 LOC106511981,LOC106522237,LOC106533251 non-coding upstream 716998 1917208 ~ 1918027 (-)
LOC120552173 NA non-coding upstream 869155 2069365 ~ 2070418 (-)
G217435 NA non-coding upstream 973090 2173300 ~ 2173556 (-)
si:dkey-225n22.4 LOC104949920,LOC103365391 other upstream 155047 1355257 ~ 1448275 (-)
LOC120552169 LOC102294047,LOC102205018 other upstream 457962 1658172 ~ 1811130 (-)
scospondin sspo,LOC104950179 other upstream 1014501 2214711 ~ 2419065 (-)
svila svil other upstream 1788716 2988926 ~ 3136214 (-)
LOC120552696 NA other upstream 2115208 3315418 ~ 3343705 (-)

Expression


Co-expression Network