mc4r (LOC104930272,LOC103365861,LOC104961440)


Basic Information

Item Value
gene id mc4r
gene name LOC104930272,LOC103365861,LOC104961440
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 24357609 ~ 24361216 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039789569.1
TACTAAGTGATGATCTGCCTGCACTTCCACAGCGAGCTGGTACGCTCTGATCTCTCTGCCTCTCATGTTTCTGTTCACTGGTAATCAGTCTCCCACACGCGTCTTCCTGCATACACCTTTCTGCTTCACTTTCCACTAAATCTTTCTCACATCTTTTTAGGGAACATTTATTTTACCGTACGCACTGAGTGGAGAGAAGGGAGTAGAGCGCTGGCATTGTTTTTGGCAGAGagtaacaacagcagcagatgcTTGAAGATAATTGCCGTTCTTGGGAAACCTAAAAGGTGAAAAAGAAggaagatctttttttttcgaTCCCCTTCAAGGGTCCCGAGGTTATCCTCCCGATAATAAGGATGACTGACTGAGCGCACACATTGAGATTTTTAACATTGAAAATCCAGATGGACCCATAACAACGGGGGAAAAGAAGACTTAACCCAAGAAGAAAGGGAATTTAAAAGGGGACATTATGAACACCACAGATCACCATGGATTAATCCAAGGCTTCTATAACAGGAGCCAAACCTCAGGCATTTTTCCACTTAACAAAGACTTATCAACCGAGGAGAAGGACTCGTCGGCAGGATGCTACGAGCAGCTGCTGATTTCCACGGAGGTTTTCCTCACTCTGGGCATCATCAGCCTGCTGGAGAACATCCTGGTTGTTGCTGCTATTGTCAAAAACAAGAACCTCCACTCGCCCATGTACTTTTTCATCTGTAGCCTCGCTGTAGCTGACATGCTTGTCAGTGTCTCCAACGCCTCAGAGACTATCGTCATAGCGCTCATCAACGGCGGCAACCTGACCATCCCCGTCACGTTGATCAAAAGCATGGACAATGTGTTTGACTCCATGATCTGTAGCTCTCTGTTAGCGTCCATCTGCAGCTTGCTGGCCATCGCCATTGATCGCTACATCACCATCTTCTACGCGCTGCGATACCACAACATTGTCACCCTGCGAAGAGCAATTTTGGTCATCGGCAGCATCTGGACGTGCTGCATTGTGTCGGGCATCCTGTTCATCATCTACTCCGAGAGCACCACCGTGCTCGTCTGCCTCATCACCATGTTCTTCACCATGCTGGTGCTCATGGCTTCGCTGTACGTCCACATGTTCCTGCTGGCGCGCCTGCACATGAAGCGCATCGCCGCGCTGCCGGGCAACGCGCCCATCCATCAGCGAGCCAACATGAAGGGCGCCATCACCCTCACCATCCTCCTCGGGGTGTTCGTGGTGTGCTGGGCGCCCTTTTTCCTCCACCTCATCCTCATGATCACCTGCCCCAGGAACCCCTACTGCACCTGTTTCATGTCCCACTTCAACATGTACCTCATCCTCATCATGTGCAACTCCGTCATTGACCCCATCATCTACGCCTTTCGCAGCCAAGAAATGAGGAAAACCTTCAAAGAGATTTTCTGCTGCTCGCACGCTCTCTTGTGCGTGTGAGCTGCCTGTTAAGTGTGAGCCGAGCTTCGACTCTGACAGCTGCAATCAGCAATTTAAATGAAACTTGGCCGACAAGGACTTTGAGGTCTGTGAGATGTAATCACTGTGGACTCATCACTGTGGACTCATCACTGTGGACTCATCACTGTGGCTCTGTTGTGCCCAGTGTTCTCGCAGTCGGCTGTTAATGATTGAAAAGTAGGGCGCTCGCCTTTGGTTACATGAGTCAGGTTGCTGAAGAGGTAGGTTTACAGACACCTTGTAAAATAGAGTACAGCTCCGTAGACAAATGCTCTTTTGTTTTGTAGTAAAACGCCGCTCTAAAGTGCAATTTGAAGTAAATGTTACCGGCATGTATATAACCGATACACATGCTCAAACTGTGGCTCATTTACCaaccttttctctttctctttctcacactGAACTCTTGTCTGTCACATTTGTCTTGCTGTTCACTGTCAAAGAAAATAATATGGTTATCTTAAAGATCTCCGTGTATCTACATGAATTATGGCACTCAAATGTCACAGCTGTTGCAACAGCAGCTTGTCCTTTAGATATCTAGCAAAGAGATTAGAGACATAGTATTCGACAGACTACCTCCATGCTTGAGAGTGCCACCCACCGCTTAACAGAGCAAATGAGATCATTTTGCACACTGCAAGCAAAGATAGAAATATGTTTACCCCTGTCATATGCTCTTGTTGTTTTGCATTGCAATGAATGTAAATATCTGTAcatctgtaattttttttattaagcctCACTGATTTGTAATAATGTGCCAATCATGAAGGCGATGAAGGCAGTGTATCCTGCTCAAAAAAAGTGGgatgtttaacttttttataaatgtggcTTTTTTGTAAGTTAGAGGTAAAACTATTAGAAAGCTAACACAGGGGAAACATCAATTGAAAAGGACTACTTGGTGGAAATGAGGTGTTATGTGTGATTTTCCAAGCTGCTCTAAACGGATAAGTGACACTGAGATCAAACTAGATGCTTCTAGAATTCACAAAACGAGCACAAACAAAACCATACCACATCTCCACTCTTTGCTGATCTGCCATTTCCCGTGTCTAGCCCACTCAGCGTAGTAATCACAGGCTATTGACTGGGATCTAAAATGCAATGGGTTGTAAAATCACTCACTGGGTTACATGTTTACAGCAATGAGGGTAATACTGTACATGCCCTCAGTATGAATAGTATGGAAAACAAATGACAGAAAATAGATGATTTAGAGCTTCACTTTAAAAtggaaaaagcaggaaaatctCATGTGTTTCTCAGGCACAAAAGATGGTGTATATGTAGTTTAGTTTATCTGCACTTATAGACAAATGTGAAAAACAATTCAGGGTGACCAAGAACCTTTCCTCCAGTGTGAAACCTCCCGTTTTTGGCACTTTACACCCTTACCTGATCAGGGATGCAGTTTTTGTTGACCCTCACCACTGATTTCCCCCTTTGAAGCAGGGCAGCAGAAAAGATTTTATTTCATCCCAGGGATGAAGAGAAAGTCACTTTAATGTTTGCAACTCGTGATTTTCGTCTGAGCAAATACCTAAAACAGACAATTAGCCTATACTATGAaacaagatcaacatgccctggatttatttacgtttcccaatccagcgatgCACGTTCatataaaagaggcggtgtttgctccatatgaccaatcgcaaacatggACAAGTCTACCaaagccgcatattttacacaaGAAGAGCAAACGATAATCCTACAGAAATATGAAGAAGACAGACACGGTTTGACAGGTAAAAAGCCAttcagtcgctgcttcctaacccaggaaggaaagctggcaaaaaattgCAGACGCTGTAAATGTATAAAGTACAagacttatcaatatcactgcCCCATGAGTCAAGCACAAtaaagatctgaccataattacacttgtgcgtTCCATAAACTTTGGTTGCTGTAGCCTATATtctttcagttgcaaccctggcagtggtaagcgatcatgggagcaaataaaataaaaacataattcaaaccgctgagCGCATGGGCAATATACGGCTCAAGAAGCTGACAAAGATACGTTATTCCCTCCGctaaaaatctatatctttcataaaaatacccatcagggaatgtt

Function

NR:

description
Melanocortin receptor 4

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0040008 regulation of growth biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004977 melanocortin receptor activity molecular_function

KEGG:

id description
K04202 MC4R; melanocortin 4 receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039789569.1 True 3608 mRNA 0.44 1 24357609 24361216

Neighbor

gene id symbol gene type direction distance location
drosha drosha coding downstream 59758 24193378 ~ 24297851 (-)
cdh10a LOC102783614,LOC100705471,LOC101477094,LOC102310056,LOC102199257 coding downstream 690752 23633683 ~ 23666857 (-)
LOC120552656 cdh18,LOC102310872 coding downstream 1049574 23128644 ~ 23308035 (-)
LOC120552718 NA coding downstream 1286712 23068720 ~ 23070897 (-)
LOC120552717 LOC104965202,LOC103365305 coding downstream 1436353 22912562 ~ 22921256 (-)
rnf152 rnf152 coding upstream 298895 24660111 ~ 24723840 (-)
LOC120552289 NA coding upstream 403445 24764661 ~ 24770211 (-)
LOC120552302 NA coding upstream 410690 24771906 ~ 24777805 (-)
psme2 psme2 coding upstream 501294 24862510 ~ 24869834 (-)
emc9 emc9 coding upstream 557156 24918372 ~ 24923172 (-)
G222041 LOC104961439,LOC108234716,LOC107988374,LOC107089423 non-coding downstream 164809 24189134 ~ 24192800 (-)
G222039 NA non-coding downstream 179622 24177740 ~ 24177987 (-)
G222038 LOC104961439,LOC107383085 non-coding downstream 189060 24168312 ~ 24168549 (-)
G222037 LOC105920180,LOC107100491,LOC106522295,LOC107383085 non-coding downstream 204847 24152479 ~ 24152762 (-)
G222012 NA non-coding downstream 533931 23823353 ~ 23823678 (-)
G222062 cdh20,LOC103456703,LOC102782851 non-coding upstream 248245 24609461 ~ 24609679 (-)
G222088 NA non-coding upstream 433650 24794866 ~ 24795350 (-)
LOC120552180 NA non-coding upstream 533356 24894572 ~ 24904700 (-)
LOC120552179 NA non-coding upstream 567108 24928324 ~ 24954497 (-)
G223155 NA non-coding upstream 635410 24996626 ~ 25023914 (-)
LOC120552322 cdh12,LOC108234660,LOC100695194,LOC101477368 other downstream 838083 23401543 ~ 23519526 (-)
smpx smpx other downstream 2139228 22202767 ~ 22218381 (-)
LOC120552473 NA other downstream 2236998 22114382 ~ 22120611 (-)
tfr1b NA other downstream 2346523 21990017 ~ 22011086 (-)
rbis LOC101064519,LOC103367294,LOC102312013 other downstream 3135942 21217680 ~ 21221667 (-)
avl9 avl9 other upstream 435373 24796589 ~ 24854888 (-)
msl2b msl2,LOC102304425,LOC102778660 other upstream 602201 24963417 ~ 24968106 (-)
LOC120552232 LOC103371349 other upstream 674668 25035884 ~ 25086902 (-)
LOC120552299 NA other upstream 1195257 25556473 ~ 25562540 (-)
LOC120552722 NA other upstream 1361274 25722490 ~ 25738940 (-)

Expression


Co-expression Network