asap1b (asap1)


Basic Information

Item Value
gene id asap1b
gene name asap1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 19518530 ~ 19585448 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039789579.1
AGTAAGTCATTTGAGAAGTCACCGGAGAAGAGGACACGTCTTTATAGATTAGATAGTTTCACACAGTTTTGCGAGGAAAATCGGCTTTCCCCTTCCATCGGCTCGCTTTCGCACCAGACTCCCAgtgctttttctttatttttacatCTTACATGGTTTTGACTTTCTGAGCATTCATCGCCAACCCTCCTGTGGGCATTTCCCCAGTTAAAGGATGCCGGATCAAATATCGGTGTCCGAGTTTCTCTCGGAGACAACCGAGGATTACAATTCCCCGACAACATCCAGCTTCACCACCCGACTGCAGAGCTGCAGGAACACAGTGAATGTGCTGGAGGAGGCTTTGGACCAGGATCGAACCTCCCTGCAGAAGGTGAAGAAATCAGTGAAGGCCATCTACAATTCAGGACAGGACCACGTCCAGAATGAAGAGAACTACGCTCAGGCTCTGGACAAATTTGGCAGCAACTTCATCAGCCGGGACAACCCCGACCTGGGAACGGCTTTTGTCAAGTTCTCCTCCCTCACCAAGGAGCTGTCTGCCCTACTGAAGAACCTGCTCCAGAGCCTCAGCCACAATGTGATCTTTACTCTGGACTCGCTGCTGAAGGGCGATTTGAAAGGCGTGAAAGGGGACATAAAGAAGCCCTTTGACAAAGCATGGAAAGACTACGAGGCCAAGTTTACAAAGATCGAGAAGGAGAAACGAGAGCACGCCAAGCAACATGGGATGATCCGCACTGAGATCACCGGGGCTGAGATCGCCGAGGAGATGGAGAAGGAGCGGCGTCTCTTCCAGCTCCAGATGTGCGAGTACCTCATCAAAGTAAATGAGATCAAGACCAAGAAAGGAGTGGACCTCCTCCAGAACCTGATTAAGTATTACCACGCACAGTGCAATTTCTTCCAGGATGGCTTGAAGACTGCGGATAAGCTGAAGCAGTACATTGAGAAGCTGGCAGCTGAtctctacaatATCAAACAAACTCAGGATGAGGAGAAGAAGCAGCTGACTGCCCTGCGGGATCTGATCAAGTCCTCCCTCCAGCTGGACCAGAAGGAGGACTCACAGAGTAAGCAGGGTGGCTACAGCATGCACCAGCTGCAGGGAAACAAGGAGTTTGGCTGTGAGAAGAAAGGTTACCTGCTGAAGAAGAGTGATGGGCTAAGGAAGGTGTGGCAGAGGAGACAGTGCTCAGTGAAGGGGGGCATGCTCACCATCTCTCATGCCACATCCAACAGGCAGCCGGTCAAACTCAACCTGCTCACCTGCCAGGTCAAGCCGAGTACTGAGGACAGGAAGTGCTTTGATCTCATTTCTCATAACCGGACATATCATTTCCAAGCTGAAGATGAACAAGAGTTTGTCATCTGGATCTCGGTGCTAACCAACAGTAAGGAGGAGGCCTTGAACATGGCGTTTCGTGGCGAGCAGAGCAGCGGAGGCGAGGACGGTTTAGAGGATCTGACCAAAGCCATCATAGAAGACGTGCTGCGCATGCCAGGCAACGAAGTCTGCTGTGACTGTGGAGCTGCAGCTACAAATCCCCTGCAGCCTTCAACAaacgtgtgcgtgtgcgtCATGCACTCTATGAGCCATCGCCAGCTCGCATCTGTTTATTATATGGGGGCCAGATCCATGGAGCTCGACAAGCTAGGAACCTCAGAACTCTTGcTGGCCAAGAATGTAGGGAACAGTAGTTTCAATGAGATCATGGAGGGAAACCTCCCGTCACCTTCACCAAAGCCCATTCCATTCAGTGACATGACGGTGAGGAAGGAGTTCATCAACGCTAAGTATGTGGACCACAAGTATGCAAGGAAGACGTGCACGTCTGCGTCAGCTAAAATGATCGAGCTGTTTGAGGCGGTTCAGTCCAGGGATCTGCTGTCCCTCATCCAGGTCTATGCAGAGGGGGTTGAACTTATGGAGCCGATCCCAGAGGTTGGACCGGAATCCGGAGAGACAGCACTGCACTACTCTGTACGGACTGCTGACCAGACCTCACTGCATTTAGTGGACTTCCTTGTGCAGAACAGCGGCAACCTGGATAAGCAGACGGAGTGGGGGAACACCGCCCTGCATTACTGCAGCATGTACGAAAAACCTGAGTGCCTCAAGTTACTCCTGAGGGGAAAGCCGGCTACTGATATCAccaatcagaacggaGAGACGGCGCTGGATGTTGCCAGGCGACTGAAGAACACTCAGTGTGAGGAGGCActtGTGCAGGCTGCAGAGGGGAAGTTCAACCCTCACATTCATGTGGAGTATGAGTGGAGCCTCAGATTGGAGGAGATGGATGAGAGCGATGACGACCTCGACGATAAGCCCAGTCCCATCAAGAAGGACCGCTCCCCGAGGCCTCAGAGCTTCTGCCACTCCTCCAGCCTCTCCCCCCACGACAAGCTCTCCCTGCCGGGCTTCATCAGCCAAAGGGACAAACAGCAGCGTCTGTCCTACAGCGCCTTCACCAACCAGATGTACAGCGCCTCCACCGACCTCACCTCCTCCCCCGTGGCCGACGGGCCGCCGCTGCCACCTAGGAACCAGGGCAAAGCTCCTCACTTGGCATTCCTTGGCTCTCATTCGCACTACGCCACACTGGCTGGCACTCGACCATACATCActcctcccccaTCTGGCCCTTCCTCTACACTCACACCAGGAGGCAGCTCCACCCTGTCCAAGAAGAGACCTCCGCCCCCACCTCCTGGACACAAACGCACCCTGTCTGACCCACCCAGCCCGCTCTCTCACAGTCCACACAGTAAAGGGGGCTTGACTGGGGGAAGCGACTCCACCCCTCCTCCTGTCAGCAAGATGTCTCCTGTTTCTAACAAGTTTGAAGGAATTCCTCAACAGCAAAGCACTACTTCAAGCAACACAAAGTCTACACTTGGTCCAAGGGTTCTTCCCAAACTACCTCAGAAAGTGGCATTGCGAAAGATTGACACCATACACCCATCTATGGATAAGCCCAGCCATCCTCCAGAGGTCTTCCAGAAGTCCCCGCCGGCCACCGACACCCCACAGAAGGCTCCTCTGGCAGACAGGCCTCAGCTGGGAGACCTGCCCCCCAAACCACAGCTGTCTGAACTTCCTCCTAAACCTGGAGAACTTCCTCCGAAGCCACAGCTGTCTGACCTCCCTCCTAAACCTCAGCTGGGAGACCTCCCGCCTAAACCCCAGCTCAAAGACCTGCCTCCCAAGCCTCATCTCGCAGACATCCCCCCAAAACCCGGAACAACCGAGTCCACTCCCCGGCCACCTCCCGGAGAGACAGTGCAAAGGCCTCAAACGcaacctccacctccacctcagCCTCAACCTCAGCCTCAAGACTCACCGTCACCTAATCAGCAAGCAAATATAGGGACCCCCATCCAACAAGCTGCTGAAGACACCAATGGGACCCCAACAGGGACTGCAGAGACACCAGTGCCCCTCCCAAGAAAGATCAACACGGGGAAAAGCAAAACCCGTCGGGTGAAGACTATCTATGACTGCCAGGCTGACAATGATGACGAACTGACTTTTGTTGAAGGAGAGGTGATTATAGTTACAGGAGAAGAGGACCAGGAGTGGTGGATCGGACACATTGAAGGAGATCCGGAAAGAAAAGGGGTGTTCCCCATGTCTTTTGTGCACATCCTGAGTGACTGACAGCCATCGAGACTTGCACTACGCCTCTCCCTAAATTGGGAGGTCCTGTAAATAGCTATTATAACACCTCTTGTCAAACGACAAGTGtcctaaagaagaagaaaaaaagcaacaaagaaGAAACCCAAGAAAGCTCATCTAAGCCATGGATGCCTCATCCATGCTGTACAAAGAATGTGTGTATTCTTCCTTTACCAGTATTATCTTAACCCTATAgcatggctgtgacaaagcCACTCTCAGAACCCTAGCACTTACCTAAAGTCTATGTTTATGCTgttactgtgtatatatgtatgtaaatatatatatgtgtgtgtaagtgtacaTGTTTTATTGTACAAAACATGTACCATTGCTCTCTGTCAGATTAAGCATCAGGGTGGTAGACTTTGAATTTTATCTGTATTGATTTTACTGGCCCTCAAGTAATTAGCTTATATTTCTGGAAAAAGGTCAAATAAGGAATGTAAAATAGGTCATGTCACTATTTTTGTCTTGCATCCCTGTTTACCACCTTAATTGACTGAAGAGGCTGGAGTCTCCCACTGATCTTCCCCGAGatgaaaacattaaatgtaCTCCTTGTTCTTGCTTGCTTTGTGTGTACACGTATTATGGTTGTTTTACAGTATAGAAACCTGCTGCTACTGTGTGGTGGAATATCAAAGCCTGTGGCTCACTGTAGGTCACTGATTTACTCCTTGTTACACTGTTCACTGTATGTATGCTTTGTTTGTGAACTCGACGCCATCTCCACAGTCCTTTGACCTTTTCTGTGCATGGTGTAACAATGACTGGAATTGAGTGGAGTGCTGTGTTCAGAGACGCTCACCTCAGGGTTTGAAGAGCCACTATTAAGCAGGACTTCACAAAAAATGTATCCTGTTAAAGCCACTATTAATGACAAGTACAGGAAACTCAAGGACATCATAGCAATAACTTGATTTTCTGGACAGGCTAGAAATTTCACATTAACTTGTGTTCATAATTCAGTGTCTTGTAAAAACCTCATGAGCTTGAAATGTTTTGAGTTATGTAATATCATTCCATGTTACTGGATCCAGTACATTGCCAGGTTTGCCTGTGAACCAGAGATGTCTTTTAGCACAGTGGACTTTGTAAAAGGCTGGAGACCCCATGTATTTTCACCCAGTCCTCACTGATTGCAGTCTTTCCCCCCCCCATTAGGAACAAACCTATCAACCCATTGTATCAATTAAAGTGCTGTACTTAACTGA

Function

symbol description
asap1 Enables cadherin binding activity. Involved in cilium assembly. Predicted to be located in plasma membrane. Predicted to be active in cell projection membrane and podosome.

NR:

description
arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1-like isoform X5

GO: NA

KEGG:

id description
K12488 ASAP; Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039789579.1 True 4908 mRNA 0.50 31 19518530 19585448

Neighbor

gene id symbol gene type direction distance location
fam49bb fam49b,LOC104954579,LOC105915818,LOC103377397,LOC107085391 coding downstream 4493 19475880 ~ 19514037 (-)
ankha ankh coding downstream 187976 19315583 ~ 19330554 (-)
vps41 vps41 coding downstream 304878 19196583 ~ 19213652 (-)
LOC120552661 esco1,LOC102306999,LOC105019393,LOC107732058,LOC107599690 coding downstream 323007 19182050 ~ 19195523 (-)
lypla1 lypla1 coding downstream 399548 19112196 ~ 19118982 (-)
chpf2 chpf2 coding upstream 54408 19639856 ~ 19648801 (-)
si:ch73-173p19.1 LOC103363515,LOC104954586 coding upstream 73441 19658889 ~ 19666720 (-)
kif9 NA coding upstream 304234 19889682 ~ 19908076 (-)
cdv3 cdv3 coding upstream 364533 19949981 ~ 19954961 (-)
tmem108 LOC107589950 coding upstream 372836 19958284 ~ 19999250 (-)
G221090 NA non-coding downstream 72236 19446045 ~ 19446294 (-)
G221088 NA non-coding downstream 78991 19436966 ~ 19439539 (-)
G221086 NA non-coding downstream 144014 19372591 ~ 19374516 (-)
LOC120552156 NA non-coding downstream 201303 19316654 ~ 19317227 (-)
G220972 NA non-coding downstream 475314 19040265 ~ 19043216 (-)
G221138 NA non-coding upstream 15258 19600706 ~ 19600939 (-)
G221143 abcf2 non-coding upstream 66906 19652354 ~ 19656460 (-)
G221146 NA non-coding upstream 84256 19669704 ~ 19669954 (-)
G221149 NA non-coding upstream 93620 19679068 ~ 19730782 (-)
G221160 NA non-coding upstream 133000 19718448 ~ 19719622 (-)
G221048 ankh other downstream 191636 19315591 ~ 19326894 (-)
mettl4 mettl4 other downstream 569035 18938913 ~ 18949495 (-)
LOC120552352 colec12,LOC102798044 other downstream 707586 18772977 ~ 18810944 (-)
G220833 NA other downstream 820560 18610236 ~ 18697970 (-)
si:ch73-174h16.4 LOC103364270,LOC104947970 other downstream 1034754 18426762 ~ 18483776 (-)
LOC120552536 fbxl7 other upstream 1249730 20835178 ~ 20862688 (-)
rbis LOC101064519,LOC103367294,LOC102312013 other upstream 1632232 21217680 ~ 21221667 (-)
tfr1b NA other upstream 2404569 21990017 ~ 22011086 (-)
LOC120552473 NA other upstream 2528934 22114382 ~ 22120611 (-)
smpx smpx other upstream 2617319 22202767 ~ 22218381 (-)

Expression


Co-expression Network