naa50 (naa50,LOC106579447)


Basic Information

Item Value
gene id naa50
gene name naa50,LOC106579447
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 16180440 ~ 16184405 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039789586.1
CTTGTGCGCATGCGGGGGTCAGGGTTGACAGTCTCCACACAGTCGTGGAAGGAGTGCGGCGGCTAAGCTAACTCCATCCAccgcaactagctagctacatgtggAGGGTAAAACGGGAAGCATCCCCGACCCTAACTCTGTCAAAATCCCTCTTTTTTACCCAAAACAACTCTAAAGTTCAGCCTCGTCGAATATAAGGGATATTATCTGTTTACAATGAAAGGTAGCCGGATCGAGCTGGGGGATGTTACGCCCCACAACATTAAGCAGCTGAAACGCCTGAACCAGGTCATCTTCCCTGTCAGCTACAACGACAAGTTTTACAAAGATGTACTGGAAGTTGGAGAGCTTGCAAAGCTAGCATACTTCAATGACATTGCAGTGGGTGCTGTGTGCTGTAGAGTGGACCACTCTCAGAACCAGAAGAGACTGTACATCATGACGCTCGGCTGTCTAGCACCCTATCGTAGACTTGGAATTGGTACTAAGATGCTGAATCATGTGCTAAACATCTGTGAGAAGGACGGCACTTTTGACAACATTTACCTTCATGTGCAGATCAGCAATGAGTCAGCCATTCACTTTTACCAGAAGTTTGGCTTTGAGATCATCGAAACAAAAAAGAATTACTACAAGAGGATAGAGCCCGCAGATGCCCATGTGTTGCAGAAGAGTCTGCGCAGCCCATGTGCACCGCCCACCGGAGAGCTTCAGAAGGCAGAGTAACGGCACAGATGTGCCCGCCTCTACAGAAACAGAACTGTGACAAATGCCCCAGGGTCGACACATTAAACACTTTCTTCAAAGGACgctaaaaagagaaaacaaatttaaagtacaaaaaaaaagctgcatttATTTTGCAAAGGGATCCCCTTTGATTTTTGCATATTTTATTGCTCCCCTCTCCTCATACAGATaattgaaaatgacaaaaaagctCAGTATCCAAAAGTGCTCCGATTGACAAAGTTGCCAACTTCAGACAGTTTTAGACTTAGGGGAGGGTGTGGTGATTGCaaagcatactgtttgtgtttgagtTGTTTTTATGCGGTTATAAGGCTAATGGGGACATATCTATACTGTTGAGCAAAAGAAAACCGTTGGTTTAAAGCTGTAAAAGTGTTTGGAAGACCataacttacacacacacacacacacaaaacacacacacaacacacaagtcaAAGCTGGTCAGCTTGGAATGATGCTTTGAGTTGTTACATGGAAAGGTCACAACTCTATTCCCTCACCACCGAACCCTGGGATTTATGGGAAATAAGTCTGACCAGCTTGTTGATATGTCATGTCCAGAGGGGAAAAGCAGAAATGTATCCCCTCGGTTCTGACGTAAAGAAAGCTGAACTGTTTTGAGGTGGTGGGAAAACGTGGTTATCACTCCTAATTTCTGAATAACTTTATTTTCCAGCCTGTTAATTTAATTACCcttcaactgttttttttgttttttgttttttaacattaaaatggcAAATGGTTCAGAGGTTCTCCTGGGTTTACTACTAATAGTGAAAACATTAAAGAATGAAAGTAATAACAAaatattgtattgaatgggttTCTGAGAAAGGCACACCACATAATCTTGTGGGATGTTTGAATAACAAAAGATTGGCTGTTTGGGATTGGATATGGGCATTATTTTCAGTAGTATAATGAAGGTGTGGGAGGATGTGTGTCTCTAAACACATGAAAGTGTTCTGAGACATCTTACCTTAAACACCTTTCAGAATTGGTCTTTTCTAACTACCTGCCTCAGGTTCTGTTAAACACCCTTAGGTTTGGAAGCTCAGCTAAAGTTTTGGTATGGTCTCTTCAACTGTGTTTTACCCAGAGGAAGCTCTGTCCCCTCTGCATGCGAGAGTTGTGTCCTCTCTACTGTAGTATAAGCatgttttttcctttctttgaaGAATTTTATCTTTTCTGGAGCTCTATATTGTAAGACTTTTTAACGTCTAAATAAAGGATTACTATTTGCAGTAAA
>XM_039789587.1
GCTTGTGCGCATGCGGGGGTCAGGGTTGACAGTCTCCACACAGTCGTGGAAGGAGTGCGGCGGCTAAGCTAACTCCATCCAccgcaactagctagctacatgtggAGGGTAAAACGGGAAGCATCCCCGACCCTAACTCTGTCAAAATCCCTCTTTTTTACCCAAAACAACTCTAAAGTTCAGCCTCGTCGAATATAAGGGATATTATCTGTTTACAATGAAAGGCCGGATCGAGCTGGGGGATGTTACGCCCCACAACATTAAGCAGCTGAAACGCCTGAACCAGGTCATCTTCCCTGTCAGCTACAACGACAAGTTTTACAAAGATGTACTGGAAGTTGGAGAGCTTGCAAAGCTAGCATACTTCAATGACATTGCAGTGGGTGCTGTGTGCTGTAGAGTGGACCACTCTCAGAACCAGAAGAGACTGTACATCATGACGCTCGGCTGTCTAGCACCCTATCGTAGACTTGGAATTGGTACTAAGATGCTGAATCATGTGCTAAACATCTGTGAGAAGGACGGCACTTTTGACAACATTTACCTTCATGTGCAGATCAGCAATGAGTCAGCCATTCACTTTTACCAGAAGTTTGGCTTTGAGATCATCGAAACAAAAAAGAATTACTACAAGAGGATAGAGCCCGCAGATGCCCATGTGTTGCAGAAGAGTCTGCGCAGCCCATGTGCACCGCCCACCGGAGAGCTTCAGAAGGCAGAGTAACGGCACAGATGTGCCCGCCTCTACAGAAACAGAACTGTGACAAATGCCCCAGGGTCGACACATTAAACACTTTCTTCAAAGGACgctaaaaagagaaaacaaatttaaagtacaaaaaaaaagctgcatttATTTTGCAAAGGGATCCCCTTTGATTTTTGCATATTTTATTGCTCCCCTCTCCTCATACAGATaattgaaaatgacaaaaaagctCAGTATCCAAAAGTGCTCCGATTGACAAAGTTGCCAACTTCAGACAGTTTTAGACTTAGGGGAGGGTGTGGTGATTGCaaagcatactgtttgtgtttgagtTGTTTTTATGCGGTTATAAGGCTAATGGGGACATATCTATACTGTTGAGCAAAAGAAAACCGTTGGTTTAAAGCTGTAAAAGTGTTTGGAAGACCataacttacacacacacacacacacaaaacacacacacaacacacaagtcaAAGCTGGTCAGCTTGGAATGATGCTTTGAGTTGTTACATGGAAAGGTCACAACTCTATTCCCTCACCACCGAACCCTGGGATTTATGGGAAATAAGTCTGACCAGCTTGTTGATATGTCATGTCCAGAGGGGAAAAGCAGAAATGTATCCCCTCGGTTCTGACGTAAAGAAAGCTGAACTGTTTTGAGGTGGTGGGAAAACGTGGTTATCACTCCTAATTTCTGAATAACTTTATTTTCCAGCCTGTTAATTTAATTACCcttcaactgttttttttgttttttgttttttaacattaaaatggcAAATGGTTCAGAGGTTCTCCTGGGTTTACTACTAATAGTGAAAACATTAAAGAATGAAAGTAATAACAAaatattgtattgaatgggttTCTGAGAAAGGCACACCACATAATCTTGTGGGATGTTTGAATAACAAAAGATTGGCTGTTTGGGATTGGATATGGGCATTATTTTCAGTAGTATAATGAAGGTGTGGGAGGATGTGTGTCTCTAAACACATGAAAGTGTTCTGAGACATCTTACCTTAAACACCTTTCAGAATTGGTCTTTTCTAACTACCTGCCTCAGGTTCTGTTAAACACCCTTAGGTTTGGAAGCTCAGCTAAAGTTTTGGTATGGTCTCTTCAACTGTGTTTTACCCAGAGGAAGCTCTGTCCCCTCTGCATGCGAGAGTTGTGTCCTCTCTACTGTAGTATAAGCatgttttttcctttctttgaaGAATTTTATCTTTTCTGGAGCTCTATATTGTAAGACTTTTTAACGTCTAAATAAAGGATTACTATTTGCAGTAAA

Function

symbol description
naa50 Predicted to enable H4 histone acetyltransferase activity; peptide alpha-N-acetyltransferase activity; and peptidyl-lysine acetyltransferase activity. Acts upstream of or within somitogenesis. Predicted to be located in cytosol and nucleus. Predicted to be part of NatA complex. Predicted to be active in cytoplasm. Is expressed in blood vasculature; head; and myotome. Orthologous to human NAA50 (N-alpha-acetyltransferase 50, NatE catalytic subunit).

NR:

description
N-alpha-acetyltransferase 50 isoform X1

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0001756 somitogenesis biological_process
GO:0005737 cytoplasm cellular_component
GO:0008080 N-acetyltransferase activity molecular_function

KEGG:

id description
K20793 NAA50, NAT5; N-alpha-acetyltransferase 50

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039789586.1 True 2011 mRNA 0.42 5 16180440 16184404
XM_039789587.1 False 2009 mRNA 0.42 5 16180440 16184405

Neighbor

gene id symbol gene type direction distance location
LOC120551982 usf3 coding downstream 238 16169979 ~ 16180202 (-)
LOC120551886 shisa2 coding downstream 68955 16104128 ~ 16111485 (-)
cdk8 cdk8 coding downstream 141603 16030459 ~ 16038837 (-)
wasf3b wasf3,LOC102784165 coding downstream 151293 16014613 ~ 16029147 (-)
rpl21 rpl21 coding downstream 179899 15997075 ~ 16000541 (-)
ccdc191 ccdc191 coding upstream 32753 16217158 ~ 16228750 (-)
si:ch211-161h7.8 LOC104965030,LOC103368931 coding upstream 102092 16286497 ~ 16288328 (-)
mix23 ccdc58 coding upstream 143768 16328173 ~ 16333827 (-)
kpna1 kpna1 coding upstream 154707 16339112 ~ 16346072 (-)
sec22c sec22c coding upstream 273928 16458333 ~ 16464016 (-)
G220171 NA non-coding downstream 61852 16117953 ~ 16118588 (-)
G220048 NA non-coding downstream 246171 15881506 ~ 15934269 (-)
G220031 NA non-coding downstream 246626 15857651 ~ 15933814 (-)
G220042 LOC100701814,LOC101478750,LOC102788341,LOC102295400,LOC103362138 non-coding downstream 309146 15870720 ~ 15871294 (-)
LOC120551922 NA non-coding downstream 403512 15773677 ~ 15776928 (-)
G220203 NA non-coding upstream 23853 16208258 ~ 16209541 (-)
G220211 NA non-coding upstream 80172 16264577 ~ 16264785 (-)
G220243 NA non-coding upstream 153413 16337818 ~ 16339037 (-)
G220254 NA non-coding upstream 180799 16365204 ~ 16366613 (-)
G220257 NA non-coding upstream 263525 16447930 ~ 16450221 (-)
G220124 NA other downstream 115219 16064670 ~ 16065221 (-)
G220117 usp12,LOC107701680,LOC107705210 other downstream 175676 16003879 ~ 16004764 (-)
si:ch211-140b10.6 polr1d other downstream 206777 15968731 ~ 15973663 (-)
mtfr1 NA other downstream 499552 15676254 ~ 15680888 (-)
trnar-ccg_2 NA other downstream 628748 15551620 ~ 15551692 (-)
drd3 drd3 other upstream 81898 16266303 ~ 16284735 (-)
LOC120552205 LOC100711537,LOC102295084,LOC108230444,LOC106948898,LOC103140410 other upstream 597667 16782072 ~ 16795124 (-)
G220412 csrnp1,LOC104937158,LOC102793366 other upstream 690244 16874649 ~ 16875300 (-)
si:ch73-174h16.4 LOC103364270,LOC104947970 other upstream 2242357 18426762 ~ 18483776 (-)
G220833 NA other upstream 2425831 18610236 ~ 18697970 (-)

Expression


Co-expression Network