txndc5 (txndc5)


Basic Information

Item Value
gene id txndc5
gene name txndc5
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 10834867 ~ 10848296 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039789594.1
CGTTGAGAGTCGGTCTTTTCACACCAGCAGGGACACTGTGCACCCACCGAGAGAGATTCACCATGGCCTCAGCACTGAATTGCACATcctttatgttgtgttttatttatttttcgtTACTGTTTGCAAGTGTATGTTGCGACGCTGATGCAGAAGAAGATGAGCATGCCAAGCACACGTACACGGTGGAGATGTTCAACGAGGCGGTGCCCACTGCACCCCACTTTGTCATGTTTTACGCCCCATGGTGCGGCCATTGCCAGAGGTTACAGCCAGCATGGAATGAACTGGCTGACAAATACAACAGCATGGACGAGCCCCCTGTGTATGTGGTAAAAGTAGACTGCGTCCCGGACACCAAGTTCTGCTCCAATGTCCACGGGGTTAGGGGCTACCCCACGCTGAAGTTGTTCAAGCCAGACCAGGAGGCAGTTAAGTACCAAGGGCCTAGAGATCTACAGTCTCTGGAGACCTGGATGCTGAAGACACTCCAGGAGGAGCCTTCAGAACCAGAGAGTGAACCGGAGCCTCCTAAAGCCCCAGAGCCCAAACAGGGCATGTATGAGCTCACTGCCCTCAACTTTAAGACCCACATAGCCAAAGGTGGCCATTTTGTGAAGTTCTTTGCCCCGTGGTGTGGTCACTGCAAAGCCATGGCCCCAACCTGGGAGCAGCTGGCCACCACCTTTGAGCACTCTGATGACGTAAAGATAGGAAAGGTGGACTGTACACAGCACTATGAGGCGTGCTCTGAGAATGGCGTCCGTGGATATCCCACGCTGCTCTTCTTCTACAACGGACAGAAGaccGATCAGtacaaaggaaaaagagacctGGACTCCTTCAAGGACTTTGTAGACAACCAGCTGAAGGCTGCCGTCACGCAGGAGCAAGTACAGGAACCGAGTGAGGAACAAAAAGCCAACGAGATCCCCACTGATGAGCCAGCCAAAGAGGAGTCCAGCGTGTTGGACCTCACGGAGAACAACTTTGACGAGACAGTGGCCAAGGGCTTCACCTTCATCAAATTCTACGCTCCATGGTGTGGCCACTGTAAGAACCTCGCTCCAACATGGGAGGACCTTTCCAAAAAGGAGTTTTCTGGCCTCACTGACGTCAAGATAGCCAAAGTGGACTGCACTGTTGAGCGCACACTCTGCAACAAGTACTCTGTTCGAGGGTACCCCACCTTGATCATGTTCAGGGCGGGGGAGCAGGGTGACGAGCACCATGGCGGCCGGGACCTGGAGAGCCTGCACAGCTTTGTGATGAGGCAGGCGAGAGACGAGTTGTAGAAACGGCAAAGTCAGCACTCCACTCTCCACCACTCTGCTCGTCCACACTGCATATCTGGCCAGTAGGacaccactctctctccctcagtaGCCAAacctctctctatctttctctctaCTCGGGTTCTCTTCAGAAAGGAGTCAGCAATGACAGACTGCAGTCTGTTCTTTCTCCTGTGTTCAAGGACAGAATGATTCAGTAGAGTGTTTTGGGATGTGAATGTTTCTCATTGCTGTTGCCAAACCTTAAACTCCCAATATGGAGAATACTATCGTATTGGTTGGCTCTGTAAATGAAGTAATATGTCGGACAACCACTTGCAAGCACTGCTAAGTCAATCAGAACCATAATTCCTCGCACagataaaatgtatttgattagGATGGTAGCACTAAAGGACAGATGTCCCAGTGTCTGCCTGTTATAGAAAACCAATTGTTTCTGATGAACTTCTGATgccattttaccttttttttttttttaaatgctaaattTTTTACATGGGATCTGTTGTTAAATCACAAGCCATTAATGTTACGGTACTGGCAGGCAGAAGTTTGTGAAGTTAGTGTCACCCAAATGTGAAGTTTGAGTGTTAAGTTGAGGGTACTTTGAATCCATGCCAGTGATGGCCAATCTGACTTAACTCTCAGGGAAACGCCCGCACACTAGAAGAAGAAGTGATGGAGGCATCATTTTTATCACGGGTCTGATGATGGAATATGGACTATTTTCTCTTAATGATGAGGCAAGATCAAGCTGAATTAAAAAAGGCTTGGTAAACTAAGCATCTTACCCTTTTTCTGACTCCTGTGATCTCAATCAGCCTTCCCTCTCTACTTCTGCTAGCATTCAGGGTCTCAGGCCTGGACCATGTTGCCCCATATCTCCATTACTGAGCTTTTGTCAGTTACTACTTTCATTAAATCTGGCCCTTCATTTTATTCTCAAATGTAGTACCAAGGTGTGTTGGTATGTGTTGTGGTACTGTATATCCCTCAGGCCAGGCCCGTGTTCAAAGCATTTGGGAACCAGTAAgtggagcaggagaagaccgTAGAAGGTTAGGACCTTTTGCATGAGAAATTAAGCTCCATTTTGGTTGTGGCACTGAACTCTGGTCATCTTTTCGAGGAAGTTATAGTTTTTATCAGAGCTTTTACAACTTTACTTCTGTAGTTGGACGTGTTTGTAATTCACTGTAGATCAGTGTCAGGTGGGCTAACTACCATATCATCTTTCTGACTGATTGTGATCCATTCTTCCCGATAGTGATTAAACCAGCTGCATCTTGGGTCTATATAATTCATTTTTCCTGCTCCCAAATACTTTTCTAAAAAACCACGCTGTGAAGCCAGCATATTTAGGCCCCTAAAACTGGGGACTGAATAGATGGGTATAGTTTGGCTTTGCTACATGGATAGTGGGGGTGAGCTGGTTGTAAGATACAGCTACACCAGCTGCTGGTTTCTAAGTCTCACTGATCTGGAAAAAGATGCATCATTTATCGATTTCAACCATAACTTGGCTGGTCTTAATTTCCCACTGTGACTGTAGCCACTCTTCAAATGAATTATTCAAACTTAAGTCTGCTGTATCATAACCATCAACCCACAAATCCAACTACAGAAGGTTAATCGGTGTTTTAAAGGTTCAACAGTCATGTCATCCGTCAAAGACCTGGTTCTAATAGCATTTGCAGTTTCTTTTCAGTGCATCTTTTGTGACTAACTGTGACTTCAGCCACCTGTTAGGCCGGGCCTGTTACACTGCAAATGCTCTTCGACCCTGGTTATGTGAAAAGAATGTGCTGCACGATGCAGGGCATCATTTGACAACACAGGTACACaaacagtcagagacacagcagtttttttttgtcagtaaaACTTTTTTATGAATAGCACATGGTCTAAGGAACTCCAGTGACagaagtattttttttccttgCAAGTCATGGGTTGTACACTACCCATGGATTTTGTACAAAAAGAGTGAATAATGGCAAGTTGTAACATGAGATTTCATaataaaaaattcaaaaataa

Function

symbol description
txndc5 Predicted to enable protein disulfide isomerase activity. Predicted to be involved in apoptotic cell clearance. Predicted to be located in endoplasmic reticulum lumen. Orthologous to human TXNDC5 (thioredoxin domain containing 5).

NR:

description
thioredoxin domain-containing protein 5

GO: NA

KEGG:

id description
K13984 TXNDC5, ERP46; thioredoxin domain-containing protein 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039789594.1 True 3344 mRNA 0.46 10 10834867 10848296

Neighbor

gene id symbol gene type direction distance location
rec8b NA coding downstream 91399 10725062 ~ 10743468 (-)
si:ch211-196f5.2 NA coding downstream 112845 10720158 ~ 10722022 (-)
nanog NA coding downstream 135398 10697289 ~ 10699469 (-)
fen1 fen1 coding downstream 148928 10679795 ~ 10685939 (-)
LOC120552021 NA coding downstream 159559 10670430 ~ 10675308 (-)
eef1e1 eef1e1,LOC102782929 coding upstream 38244 10886540 ~ 10895407 (-)
slc35b3 slc35b3 coding upstream 95796 10944092 ~ 10956895 (-)
ofcc1 ofcc1 coding upstream 276837 11125133 ~ 11210500 (-)
tfap2a tfap2a coding upstream 474306 11322602 ~ 11336390 (-)
mak mak coding upstream 494445 11342741 ~ 11357345 (-)
G218986 NA non-coding downstream 117968 10715085 ~ 10716899 (-)
G218951 NA non-coding downstream 170084 10633287 ~ 10664783 (-)
LOC120552022 NA non-coding downstream 173141 10658465 ~ 10661726 (-)
G218940 NA non-coding downstream 236059 10597708 ~ 10598808 (-)
G218872 ngdn non-coding downstream 361254 10472123 ~ 10473613 (-)
G219113 NA non-coding upstream 530311 11378607 ~ 11477103 (-)
G219125 NA non-coding upstream 568436 11416732 ~ 11420755 (-)
G219130 tmem56,LOC103482516,LOC104925854,LOC107094156 non-coding upstream 592948 11441244 ~ 11445755 (-)
G219138 NA non-coding upstream 618798 11467094 ~ 11469317 (-)
G219169 NA non-coding upstream 923555 11771851 ~ 11807316 (-)
G218950 NA other downstream 165340 10577399 ~ 10669527 (-)
LOC120552013 NA other downstream 219646 10604320 ~ 10615221 (-)
cngb3.1 LOC103363254,LOC102786718,LOC108428960,LOC104948783 other downstream 986626 9833462 ~ 9848241 (-)
LOC120551928 LOC104943218,LOC103369878,LOC100710535,LOC102301415,LOC101469805 other downstream 1864229 8957409 ~ 8970638 (-)
prkdc prkdc other downstream 1983141 8797781 ~ 8851726 (-)
bloc1s5 bloc1s5 other upstream 15989 10864285 ~ 10868787 (-)
pign pign,LOC104945957,LOC102796964 other upstream 1569052 12417348 ~ 12433035 (-)
bmi1a bmi1,commd3,LOC103371470,LOC106919738,LOC103482475 other upstream 2329964 13178260 ~ 13194142 (-)
pdk3a pdk3 other upstream 2840125 13688421 ~ 13696741 (-)
sema5a sema5a other upstream 2975162 13823458 ~ 13940381 (-)

Expression


Co-expression Network