zgc:101569 (LOC102309791,LOC106455900,LOC102784166,LOC100695384,LOC101475816,LOC106931939)


Basic Information

Item Value
gene id zgc:101569
gene name LOC102309791,LOC106455900,LOC102784166,LOC100695384,LOC101475816,LOC106931939
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 10769375 ~ 10815975 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039789596.1
GTGTCACACCTTCATTTCAGAGTTGTGTTGAAGTTAGTTAGCTAGCATACTGCGTGAAGAGTAGAACGTATAATGCTCATTTTTACAGTCATTATAAATAATTTGTGAAATGCGTTAGCGCTTAATTTGTTTATGAGTTTAGCTAGAGCGTCTACGTTTTTCATGTGAGTGAGTGTTAGCAATGGCGCTGAAGTATTTTAGGACATTGAGACCAATTTTAAGGGCTACCTATCACAGGAAAACATTTGGACAGTCGATAAAGGCGAGCTTGTTGACAGTTAAATACTACAGCACTGCAACTGGAGGTGAAGACGCAGGAACAGTTGCGGGACAGACTGTGGTCACAGAGCGCAGGGGGTCCGTGGTTACCGTGGCGATAAACAGACCCGAGGTGCGTAATGCGGTGAACCAGGAGACGGCGAGGCGTCTGCTTGAAGAGCTGGAGGCCTTCGACAGTGACCCAGACTTACACGTGGCTGTCCTGCATGGGAAAGGAGGGAATTTCTGTGCTGGTTATGATCTGAAAGAGCTGGCCAATCACCCTGCCTCCCTCAAATTGGAGCAAGATGTCACCAAGGGTCCCGGTCCGATGGGTCCCTCCCGTTTGGAACTGTCTAAGCCGCTGATAGCAGCAGTCAGCGGCTTTGCTGTGGCTGGAGGGCTGGAGCTGGCTCTGCTGGCAGATCTGAGAGTGGTGGAGGAGAGCGCCGTCATGGGGGTGTTCTGTCGCAGGTTTGGAGTTCCTCTGATTGACGGAGGCACAGTGCGGCTCCCGCGTCTCATTGGTCTGTCACGAGCCCTCGACCTGATTCTGACTGGACGACCAATCGGAGCGCAGGAGGCTCTTGCCTACGGACTGGCAAACAGAGTTGTTCCAAATGGCCAAGCTTTACAGGCAGCCTTGCAGTTAGCAGAGCAGATCCGCTCCTTCCCTCAGCAGTGTCTGCGGGCCGACCGCTCCTCAGCCATGTACAGCTGCTACGATGCTCCCTCCttcacacagGCCATGCAGTATGAGATCGACCACGGAATTCCTGTCATCCAATCAGAAGCTGTCACCGGGGCAACCAGTTTCACTACTGGAGCAGGAAAAGGAGGGAAATTCTTCTAGGAATTAGTTTGCAGAGGCCTTGTGCATTTCAGGTGATCTAACACATCTTGCTGCATCCAATGTTTGATCTGGTCGATTTGATATTAATAAGATAATCCTTACCTAGCCAACCATATTAGCTTGTTATCTAATAGATATATTGACTAGTAGTTATGTTAAATAAAAGAACTAAGGAATAATGTTGTATTATTAGGTTTATTATTCATTTGGATTTGTGTGAGATGCAATTGTAAGCATAGTTTTTGGAGGAATGACATCTAAAAAGCAGAAAGATAAAACACAAAGGTAATGTGAGTCTAATGTATATTTTAAAGCCACAATTTGCAATTGTTTTAGAGTACAACTGTCAGTCTGCAAGCTCCACATTTCATGTAGCAGCGTGTTTTTAAATGAGGGCTGTTTAAACCCTGATGGCTGGGGGAAAATGGAGTTCAACGTCAAGAATACACTGGAGCTTTACCTTTTCATTTTGGAAAACACTTAGAACAAAAAAACTAGTTTTAACCCAAGCTGATGAAACCAAAATGccatttttctttcatttgggTATCGGCCTACTACCctgattgtttttctttctttctgtgtgaattataaatatatacgtttaaaaaaag
>XM_039789597.1
GTGTCACACCTTCATTTCAGAGTTGTGTTGAAGTTAGTTAGCTAGCATACTGCGTGAAGAGTAGAACGTATAATGCTCATTTTTACAGTCATTATAAATAATTTGTGAAATGCGTTAGCGCTTAATTTGTTTATGAGTTTAGCTAGAGCGTCTACGTTTTTCATGTGAGTGAGTGTTAGCAATGGCGCTGAAGTATTTTAGGACATTGAGACCAATTTTAAGGGCTACCTATCACAGGAAAACATTTGGACAGTCGATAAAGGCGAGCTTGTTGACAGTTAAATACTACAGCACTGCAACTGGAGGTGAAGACGCAGGAACAGTTGCGGGACAGACTGTGGTCACAGAGCGCAGGGGGTCCGTGGTTACCGTGGCGATAAACAGACCCGAGGTGCGTAATGCGGTGAACCAGGAGACGGCGAGGCGTCTGCTTGAAGAGCTGGAGGCCTTCGACAGTGACCCAGACTTACACGTGGCTGTCCTGCATGGGAAAGGAGGGAATTTCTGTGCTGGTTATGATCTGAAAGAGCTGGCCAATCACCCTGCCTCCCTCAAATTGGAGCAAGATGTCACCAAGGGTCCCGGTCCGATGGGTCCCTCCCGTTTGGAACTGTCTAAGCCGCTGATAGCAGCAGTCAGCGGCTTTGCTGTGGCTGGAGGGCTGGAGCTGGCTCTGCTGGCAGATCTGAGAGTGGTGGAGGAGAGCGCCGTCATGGGGGTGTTCTGTCGCAGGTTTGGAGTTCCTCTGATTGACGGAGGCACAGTGCGGCTCCCGCGTCTCATTGGTCTGTCACGAGCCCTCGACCTGATTCTGACTGGACGACCAATCGGAGCGCAGGAGGCTCTTGCCTACGGACTGGCAAACAGAGTTGTTCCAAATGGCCAAGCTTTACAGGCAGCCTTGCAGTTAGCAGAGCAGATCCGCTCCTTCCCTCAGCAGTGTCTGCGGGCCGACCGCTCCTCAGCCATGTACAGCTGCTACGATGCTCCCTCCttcacacagGCCATGCAGTATGAGATCGACCACGGAATTCCTGTCATCCAATCAGAAGCTGTCACCGGGGCAACCAGTTTCACTACTGGAGCAGGAAAAGGAGGGAAATTCTTCTAGGAATTAGTTTGCAGAGGCCTTGTGCATTTCAGGCAGACAAAGACCTCATTAGGTCTAGGAGGTGTCCTGTCTAGACAGTGTGATGACAGGACACAGAACCTCTGTTTAATGTTTCCTCCTCCCTCTACTTCCAATTCAcccagcatacacacacatcacctgCTCTGCCTCCagggatgcacacacacagtttcttaAAGTCAAGCAAAATGTTAAGGACATAGAAGTATTTAAGTGCCTTTTTTTCAATC
>XR_005637949.1
GTGTCACACCTTCATTTCAGAGTTGTGTTGAAGTTAGTTAGCTAGCATACTGCGTGAAGAGTAGAACGTATAATGCTCATTTTTACAGTCATTATAAATAATTTGTGAAATGCGTTAGCGCTTAATTTGTTTATGAGTTTAGCTAGAGCGTCTACGTTTTTCATGTGAGTGAGTGTTAGCAATGGCGCTGAAGTATTTTAGGACATTGAGACCAATTTTAAGGGCTACCTATCACAGGAAAACATTTGGACAGTCGATAAAGGCGAGCTTGTTGACAGTTAAATACTACAGCACTGCAACTGGAGGTGAAGACGCAGGAACAGTTGCGGGACAGACTGTGGTCACAGAGCGCAGGGGGTCCGTGGTTACCGTGGCGATAAACAGACCCGAGGTGCGTAATGCGGTGAACCAGGAGACGGCGAGGCGTCTGCTTGAAGAGCTGGAGGCCTTCGACAGTGACCCAGACTTACACGTGGCTGTCCTGCATGGGAAAGGAGGGAATTTCTGTGCTGGTTATGATCTGAAAGAGCTGGCCAATCACCCTGCCTCCCTCAAATTGGAGCAAGATGTCACCAAGGGTCCCGGTCCGATGGGTCCCTCCCGTTTGGAACTGTCTAAGCCGCTGATAGCAGCAGTCAGCGGCTTTGCTGTGGCTGGAGGGCTGGAGCTGGCTCTGCTGGCAGATCTGAGAGTGGTGGAGGAGAGCGCCGTCATGGGGGTGTTCTGTCGCAGGTTTGGAGTTCCTCTGATTGACGGAGGCACAGTGCGGCTCCCGCGTCTCATTGGTCTGTCACGAGCCCTCGACCTGATTCTGACTGGACGACCAATCGGAGCGCAGGAGGCTCTTGCCTACGGACTGGCAAACAGAGTTGTTCCAAATGGCCAAGCTTTACAGGCAGCCTTGCAGTTAGCAGAGCAGATCCGCTCCTTCCCTCAGCAGTGTCTGCGGGCCGACCGCTCCTCAGCCATGTACAGCTGCTACGATGCTCCCTCCttcacacagGCCATGCAGTATGAGATCGACCACGGAATTCCTGTCATCCAATCAGAAGCTGTCACCGGGGCAACCAGTTTCACTACTGGAGCAGGAAAAGGAGGGAAATTCTTCTAGGAATTAGTTTGCAGAGGCCTTGTGCATTTCAGATAAGATAGGCTCTGGCAgtagcagagacacagagagagatatgGACACCTTTGGACCTTATCACCAGGACCATCACAGTTTGAAGGGGCCATGAAGACACAACACAGTGGAGTACGACAGGGAGCTCTCTCCGCAGCGGCGTCACCACAAGGAGTTTAAGTTCAACCTCTCGCAGATCCCAGAGGGCGAGGCCATCACCGCAGCAGAGTTT

Function

NR:

description
uncharacterized protein LOC110489765 isoform X2

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K01692 paaF, echA; enoyl-CoA hydratase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039789596.1 True 1728 mRNA 0.45 7 10769375 10786658
XM_039789597.1 False 1362 mRNA 0.51 8 10769375 10787443
XR_005637949.1 False 1355 transcript 0.52 9 10769375 10815975

Neighbor

gene id symbol gene type direction distance location
pdcd6 pdcd6 coding upstream 174 10744678 ~ 10769201 (+)
tm9sf1 tm9sf1 coding upstream 73766 10686028 ~ 10695609 (+)
pck2 pck2,LOC104953087 coding upstream 214067 10542337 ~ 10555308 (+)
LOC120552103 NA coding upstream 238698 10527522 ~ 10530677 (+)
thtpa thtpa coding upstream 257073 10508133 ~ 10512302 (+)
plcxd2 LOC103354532,LOC100692427 coding downstream 541582 11357557 ~ 11368065 (+)
LOC120552213 tmem56,LOC103482516,LOC104925854,LOC107094156 coding downstream 609979 11425954 ~ 11445755 (+)
bco1 bco1,LOC108244032,LOC100692880 coding downstream 635118 11451093 ~ 11456575 (+)
zc2hc1a zc2hc1a coding downstream 650225 11466200 ~ 11476419 (+)
ctnnd2a LOC102291374,LOC102215396,LOC108244022,LOC103353359,LOC101484208 coding downstream 679502 11495477 ~ 11779385 (+)
G218908 NA non-coding upstream 104592 10632987 ~ 10664783 (+)
G218910 NA non-coding upstream 109936 10640646 ~ 10659439 (+)
G218899 NA non-coding upstream 169574 10591619 ~ 10599801 (+)
G218896 NA non-coding upstream 186025 10577399 ~ 10583350 (+)
G218892 NA non-coding upstream 206264 10557880 ~ 10563111 (+)
G219046 NA non-coding downstream 59074 10875049 ~ 10946088 (+)
LOC120552466 NA non-coding downstream 140633 10956608 ~ 10969329 (+)
G219099 NA non-coding downstream 562662 11378637 ~ 11477907 (+)
LOC120552242 NA non-coding downstream 667293 11483268 ~ 11486685 (+)
G219141 NA non-coding downstream 678481 11494456 ~ 11494655 (+)
ipo4 ipo4,LOC102785023 other upstream 50061 10703138 ~ 10719314 (+)
dcaf11 dcaf11 other upstream 243171 10516450 ~ 10526204 (+)
G218875 pabpn1 other upstream 274387 10488267 ~ 10494988 (+)
G218848 LOC103365363 other upstream 346126 10422586 ~ 10423249 (+)
G218695 NA other upstream 1310675 9458183 ~ 9458700 (+)
tmem14ca LOC104958612,LOC101162485 other downstream 524352 11340327 ~ 11342705 (+)
G219081 NA other downstream 531207 11347182 ~ 11348405 (+)
phldb2b LOC104958614,LOC100693428,LOC103354549,LOC108244019,LOC101481236,LOC102301890 other downstream 555475 11371450 ~ 11418476 (+)
LOC120552281 dap other downstream 975038 11791013 ~ 11807308 (+)
relch kiaa1468 other downstream 1617229 12433204 ~ 12471820 (+)

Expression


Co-expression Network