LOC120552023 (LOC103373088)


Basic Information

Item Value
gene id LOC120552023
gene name LOC103373088
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 18613150 ~ 18617399 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039789641.1
TCATACTGTAGAGGTAGGAGGAAGTTCTAGTCCGGCGAACTAGCCGCCCAAAGACAAATAATACCTGAATAAACCCTCAATTGGGATTAAGACAAGACTATGGAACCGAGTAGACCACTTCACACGGAAGCCAGAGATACCTCCGGATCAGAAGAGGAGGCCAAAAAGGCAGCAGCTGCTGCGGCTAACCGCCTGCCTGAGGTTCGTCTGGTGGTGCTGGGCTGGAGGTGGCCGGGGAAGAGCCTGACTGGAAACACCATCATAGGCCGAGAGGAGTTTCGATTGGAGCGAGCAGCCGAGTTCTGTgtgaagagacagacagaggtgcTAGGGCGGCAGGTGATTGTGGTGGACACTCCAGGCTGGTTCTCCGCCCAGGATACGCCACCCTCCTATAAACAGGAGTTAGTGAGGGGAGCATCTCTTTGCCCTCCAGGCCCACACGTCTTCCTGCTCGTCATCCCTGTGGGCATGTTCACAGAGGTGGATCGTGCTCGCATTGAGGAACACGTGAGCCTCTTTGGCGAGCGTGTGTGGAAGCACACAATTGTGGTTTTCACCTGGGCAGAGGTGTTGAAGACCATTTCAATTGAGAGGTACATTCGCAGGGAGGGCAAGGAGCTGCAGTGGGTGCTCGAAAAGTGTAAGCGAAGATACTTTGTTATTAATAACTGCATATTTGGGGAGCATCCCCAGGTGGGCCGCTTGCTGGAGAAAGTGGAAAAGATCGTGGCAGAGGAGGGGGGCTACTACAACCCAGAGGAGgtggagaaggagaagaaaccTCTGGATGAGAACCAGAATCCAGCCAGAGAGGGGCGGGAGCTGGGGGCACGGCCCAAACAGAACTCTGGACTGGGTTTGTCCAAAGTCATGGAGGTGGAGCCGCTTTCCAGTGAGTGATGCACTTATCTTGGCTCACAAGAAAGTCAAACTGAAGTCTTGGAATGTTATGAGTGTCTTTCTGCTAATTAAATGCCATGAACCTCTTAACACCACTATAATAATAGTGATATCACAGTAGTTTAGCTAAATCCATCTGAATTAAGCTTGTATTAATGTAAAATGgagccctaataataataataatgcaccATGTTTGATTCTAGATTAACAAAAGACTCTTGGCTGATGGAACCTCCAAACCACAACTAACCGAGCATCTGCCTTACTGCGCTGATGGCAAAGCGGTTTatttgacaagaaaaaaaaagggtaacTGAAATTTCACCTAAATGTACAAAtcagtgtgatttatttatttttttaatcagacaTCTTACTGcgtctttgtttgtgtgcgttTTTTATGATTCTCACTGTGATGATATGAAAGTGATGATATGAGAGGCCTTTGCCACATTAACGCGCTTTTTTCTTGCTGTCCAAATATTAATACTCCCGTTTTAACATGTATTAATATTTTGTTCTTTAGTTCGGAAGATGTtcttaggtttttttttttttatagtatctTGAGGGTTGTGTGATGGTAGGGTTTTCATTTAATCAAAAAGAAGGAAGCACAGGCTGTTACACGTATGGCtgtcattatttttaaacacaatatGTACACTCCTTAGTCTTGGCGGATACCAACGGCAGAACTGCACTACTAAATTGTTACTATAATATTCTGTCTGTGACTGTTAAGGGGattttctttaatgtttttttttttaataattcccaTTTGTTGTGACCAAACTGTAAATGCTTATAAAGCACTTTGGCAGGTATTGCTTTTTTGTGTTGCCTTAAAGCagttaatttgttttccctTAATTTGATCTTTCACATTTATTTCACTGTGATGTAAGAGATGTACAGAGGGATAGGTTTGAGGCAAGGATGCTGTAATGGGTAAATTTCACAATTGTTTTGAAAtttggcttttgtttttttctatggTGTACTATTATTGGATAGCGTCAGCTGCTCTGGACAGTGGACAGACCCTCAAACCTTCCATGAGGCTAACTGTTATAGGCCCTCGGATGAATCCGGTAGTGTTACACCACCATCCATGTCCCAGTTAAAGGAAATGTACAGTAACAACGGTTACATCCTGTAGTTAACTATAGTTGGGTGTCTGTAATTGGGGCCATTATAGGACTGGCCTAGCTGCACAAAGCGTTAACAGGTGAACACAGTAGTGAATCCTTGCCCTGAACACATCCCTCTACTGCAGATCTGTTCACATATACACATGGTTACCAATATAACTGTCGACTCTTTTACTTGGGAATACTGCTAATTTATTTTTAGGTCATCTGGTGAAATGTAGGGGTGAATCATTTACTAGTAACATTGCTAGAATGGCTGCGAGTTTCAAGGACCCTAGTTGTAAAATGACTGCCTTCAATCTTTTGTAAATGTGACATAACTGTTCTCACTCTTGACGCTCAGGATCCAAATGTGCTGGTTTtcattcttgtttttttccactGGGACACATGGTGAATGCAATCACCAAGACTGTTGAATAGAAAACCAGCAAAGGCCCTGATAGACAGGATTTAAATCAACTGACTCAAAGCCTTTTGGTATGAATGCTGTAGATAGTAATAATTCTTTAAAGAGGCTGACTGTAATTTCATGAATGTGTTTATACTCATTAGAGAGTAAAGAGCAAACCCAATGCTGTATACTCAGATATGCACTATGGCTATTTCATCCAGTGTGGGCAAATACAGACGTTTGTTGGAATTTAGTACTAAACTATGAGACAGGAAACAGGTCTGCTGTAGACTGCTGATTGTACACCTGTGCCCAAAGGACTCACTgttactgatgttttttttattttttttattcaggggGTTGAAAAAAACACGTCATGAAAAAGTACTTTAACACTGGTACAGATGTGGATCATACTGTATTTGGTCAAATGATAAGAAGTCTGATAATCAGCACTCTGATATGTTTTCAAAGCAACATGAAACAATGCACCAGTCAGACAATGGCTGAATTATTGAAtgacaaatatttattaaagagAAAAAGTCTTGAACACATTGATTGCAAGAGTCACAAAATAAGGTTAGGATTTAGCAGACGTGTATACAAACTGCTGTTTGGCATGCAACCTAATATAACCAGTCTTTGTAGCAGACAGTATATGTAATGGCTATTGAGTTACTTTGAGTCCAACATGTGAATCAAGTTACTCCTTAAGAAATGAGTTTGCTGTATCCTCTGTAGGCCTGCAACATGTTTCATTGGCCCACACTATTTACATTAGATTTGCTTGTTATAAATgcactgtgtttttcttctattaggttaaaataaatgtatattttgatCTAA
>XM_039789642.1
TCATACTGTAGAGGTAGGAGGAAGTTCTAGTCCGGCGAACTAGCCGCCCAAAGACAAATAATACCTGAATAAACCCTCAATTGGGATTAAGACAAGACTATGGAACCGAGTAGACCACTTCACACGGAAGCCAGAGATACCTCCGGATCAGAAGAGGAGGCCAAAAAGGCAGCAGCTGCTGCGGCTAACCGCCTGCCTGAGGTTCGTCTGGTGGTGCTGGGCTGGAGGTGGCCGGGGAAGAGCCTGACTGGAAACACCATCATAGGCCGAGAGGAGTTTCGATTGGAGCGAGCAGCCGAGTTCTGTgtgaagagacagacagaggtgcTAGGGCGGCAGGTGATTGTGGTGGACACTCCAGGCTGGTTCTCCGCCCAGGATACGCCACCCTCCTATAAACAGGAGTTAGTGAGGGGAGCATCTCTTTGCCCTCCAGGCCCACACGTCTTCCTGCTCGTCATCCCTGTGGGCATGTTCACAGAGGTGGATCGTGCTCGCATTGAGGAACACGTGAGCCTCTTTGGCGAGCGTGTGTGGAAGCACACAATTGTGGTTTTCACCTGGGCAGAGGTGTTGAAGACCATTTCAATTGAGAGGTACATTCGCAGGGAGGGCAAGGAGCTGCAGTGGGTGCTCGAAAAGTGTAAGCGAAGATACTTTGTTATTAATAACTGCATATTTGGGGAGCATCCCCAGGTGGGCCGCTTGCTGGAGAAAGTGGAAAAGATCGTGGCAGAGGAGGGGGGCTACTACAACCCAGAGGAGgtggagaaggagaagaaaccTCTGGATGAGAACCAGAATCCAGCCAGAGAGGGGCGGGAGCTGGGGGCACGGCCCAAACAGAACTCTGGACTGGGTTTGTCCAAAGTCATGGAGGTGGAGCCGCTTTCCAATTAACAAAAGACTCTTGGCTGATGGAACCTCCAAACCACAACTAACCGAGCATCTGCCTTACTGCGCTGATGGCAAAGCGGTTTatttgacaagaaaaaaaaagggtaacTGAAATTTCACCTAAATGTACAAAtcagtgtgatttatttatttttttaatcagacaTCTTACTGcgtctttgtttgtgtgcgttTTTTATGATTCTCACTGTGATGATATGAAAGTGATGATATGAGAGGCCTTTGCCACATTAACGCGCTTTTTTCTTGCTGTCCAAATATTAATACTCCCGTTTTAACATGTATTAATATTTTGTTCTTTAGTTCGGAAGATGTtcttaggtttttttttttttatagtatctTGAGGGTTGTGTGATGGTAGGGTTTTCATTTAATCAAAAAGAAGGAAGCACAGGCTGTTACACGTATGGCtgtcattatttttaaacacaatatGTACACTCCTTAGTCTTGGCGGATACCAACGGCAGAACTGCACTACTAAATTGTTACTATAATATTCTGTCTGTGACTGTTAAGGGGattttctttaatgtttttttttttaataattcccaTTTGTTGTGACCAAACTGTAAATGCTTATAAAGCACTTTGGCAGGTATTGCTTTTTTGTGTTGCCTTAAAGCagttaatttgttttccctTAATTTGATCTTTCACATTTATTTCACTGTGATGTAAGAGATGTACAGAGGGATAGGTTTGAGGCAAGGATGCTGTAATGGGTAAATTTCACAATTGTTTTGAAAtttggcttttgtttttttctatggTGTACTATTATTGGATAGCGTCAGCTGCTCTGGACAGTGGACAGACCCTCAAACCTTCCATGAGGCTAACTGTTATAGGCCCTCGGATGAATCCGGTAGTGTTACACCACCATCCATGTCCCAGTTAAAGGAAATGTACAGTAACAACGGTTACATCCTGTAGTTAACTATAGTTGGGTGTCTGTAATTGGGGCCATTATAGGACTGGCCTAGCTGCACAAAGCGTTAACAGGTGAACACAGTAGTGAATCCTTGCCCTGAACACATCCCTCTACTGCAGATCTGTTCACATATACACATGGTTACCAATATAACTGTCGACTCTTTTACTTGGGAATACTGCTAATTTATTTTTAGGTCATCTGGTGAAATGTAGGGGTGAATCATTTACTAGTAACATTGCTAGAATGGCTGCGAGTTTCAAGGACCCTAGTTGTAAAATGACTGCCTTCAATCTTTTGTAAATGTGACATAACTGTTCTCACTCTTGACGCTCAGGATCCAAATGTGCTGGTTTtcattcttgtttttttccactGGGACACATGGTGAATGCAATCACCAAGACTGTTGAATAGAAAACCAGCAAAGGCCCTGATAGACAGGATTTAAATCAACTGACTCAAAGCCTTTTGGTATGAATGCTGTAGATAGTAATAATTCTTTAAAGAGGCTGACTGTAATTTCATGAATGTGTTTATACTCATTAGAGAGTAAAGAGCAAACCCAATGCTGTATACTCAGATATGCACTATGGCTATTTCATCCAGTGTGGGCAAATACAGACGTTTGTTGGAATTTAGTACTAAACTATGAGACAGGAAACAGGTCTGCTGTAGACTGCTGATTGTACACCTGTGCCCAAAGGACTCACTgttactgatgttttttttattttttttattcaggggGTTGAAAAAAACACGTCATGAAAAAGTACTTTAACACTGGTACAGATGTGGATCATACTGTATTTGGTCAAATGATAAGAAGTCTGATAATCAGCACTCTGATATGTTTTCAAAGCAACATGAAACAATGCACCAGTCAGACAATGGCTGAATTATTGAAtgacaaatatttattaaagagAAAAAGTCTTGAACACATTGATTGCAAGAGTCACAAAATAAGGTTAGGATTTAGCAGACGTGTATACAAACTGCTGTTTGGCATGCAACCTAATATAACCAGTCTTTGTAGCAGACAGTATATGTAATGGCTATTGAGTTACTTTGAGTCCAACATGTGAATCAAGTTACTCCTTAAGAAATGAGTTTGCTGTATCCTCTGTAGGCCTGCAACATGTTTCATTGGCCCACACTATTTACATTAGATTTGCTTGTTATAAATgcactgtgtttttcttctattaggttaaaataaatgtatattttgatCTAA

Function

NR:

description
PREDICTED: GTPase IMAP family member 4-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039789641.1 True 3315 mRNA 0.41 2 18613150 18617399
XM_039789642.1 False 3101 mRNA 0.42 3 18613150 18617399

Neighbor

gene id symbol gene type direction distance location
esyt2b esyt2 coding downstream 205225 18374720 ~ 18407925 (-)
ncapg2 ncapg2 coding downstream 239124 18359504 ~ 18374026 (-)
ptprn2 ptprn2,LOC102778033 coding downstream 255152 18231466 ~ 18357998 (-)
mnx1 mnx1 coding downstream 465050 18145295 ~ 18148100 (-)
lmbr1 lmbr1,LOC102779560 coding downstream 480167 18098246 ~ 18132983 (-)
chmp4c chmp4c,LOC107086476,LOC106961905 coding upstream 266 18617665 ~ 18620964 (-)
trnar-ccg_3 NA coding upstream 7327 18624726 ~ 18624798 (-)
arl8 arl5b,LOC103373092,LOC100708858,LOC106590131 coding upstream 22858 18640257 ~ 18648625 (-)
cacnb2a cacnb2 coding upstream 41878 18659277 ~ 18728599 (-)
LOC120551919 slc39a12 coding upstream 114125 18731524 ~ 18740086 (-)
LOC120552692 NA non-coding downstream 35073 18472125 ~ 18578077 (-)
G220732 dnajb6 non-coding downstream 398761 18207365 ~ 18214389 (-)
G220742 dnajb6 non-coding downstream 411632 18188724 ~ 18201518 (-)
G220695 NA non-coding downstream 509994 18066795 ~ 18103156 (-)
G220688 NA non-coding downstream 563666 18049016 ~ 18049484 (-)
G220839 zfand1 non-coding upstream 5292 18622691 ~ 18623385 (-)
G220860 NA non-coding upstream 123018 18740417 ~ 18740616 (-)
G220888 NA non-coding upstream 198507 18815906 ~ 18816378 (-)
G220893 NA non-coding upstream 212352 18829751 ~ 18829985 (-)
G220972 NA non-coding upstream 422866 19040265 ~ 19043216 (-)
si:ch73-174h16.4 LOC103364270,LOC104947970 other downstream 129374 18426762 ~ 18483776 (-)
G220412 csrnp1,LOC104937158,LOC102793366 other downstream 1737850 16874649 ~ 16875300 (-)
LOC120552205 LOC100711537,LOC102295084,LOC108230444,LOC106948898,LOC103140410 other downstream 1818026 16782072 ~ 16795124 (-)
drd3 drd3 other downstream 2328415 16266303 ~ 16284735 (-)
G220124 NA other downstream 2547929 16064670 ~ 16065221 (-)
LOC120552352 colec12,LOC102798044 other upstream 155578 18772977 ~ 18810944 (-)
mettl4 mettl4 other upstream 321514 18938913 ~ 18949495 (-)
G221048 ankh other upstream 698192 19315591 ~ 19326894 (-)
LOC120552536 fbxl7 other upstream 2217779 20835178 ~ 20862688 (-)
rbis LOC101064519,LOC103367294,LOC102312013 other upstream 2600281 21217680 ~ 21221667 (-)

Expression


Co-expression Network