si:ch211-196f5.2


Basic Information

Item Value
gene id si:ch211-196f5.2
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 10720158 ~ 10722022 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039789706.1
GCAAGTCCGTATGCATTTAGACACACTCAGACTTTCCAGAGGACTTCTAGATCAGAAGAGGCAGAGCTCTGAATCATCAGcccagagaggagaggggaggagaggctAGATCAGCCAGCATCTGCAACAACAACACGGCGCAGATACCCAGCATCAGCCACAGAGATAGAGTACAGATCATAGAAGCGAGGGCGAGGGACACATCGCGTTCTTTTGTTTAACATAGTGATCAGAAAGTCAAGATGGCAGCAGACGAGACAACAAGCTTgctggaggagggagaggcCAACGTGGAGCAGGCCAACGGAGGGCCGGACAGCCCAGCAGACAGGGAGCCCCCCGGGTCACGGGGCAAGATGGTGCGTGTTGAACTGGAGTGGGAGATCCCCATGTCTCTGTCACTGCCCATCCTGGTGGAGCCCGACGCGGCACACCAGCCTTTTCCCTTCCTGGACACGACCCTGGCCGACCTGGGCATCCAAGAgtcagAGGTGAAGGAGAGGGTGGTGTGGGTCGACACCAAGAAGACCCAGGTTAAGAACAAAGCAGGGAAGCTGAAGGAGAAAGAGATCACCATCCTGGagGTGAGAGTGAAAGCCCAGAAGCCGGGAGACAAACAGCTCCAGGAGGTCCTGTACAGCACTGAGGCGCACACTGACCGCTCCTTCTGTCGTACAGGAATGGATATCCTGCCCTGGAAACACACGAATACAGgGGAGAATGGACTGACACCGGTGCAGATGACTATGGCGTTGGACGTGGAAAACCAGCAGCCTGACTCCACTGAGGCCCAGGGACAACgggagatctgaggagcaacAAAGAGTCGCCATCATCCAAAACAGAATGCAGATTtaaaaggtgccgtaggtaggattgtgaagatccaggacttagccaaaacatttgaacaatgacaacttctcagtccctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039789706.1 True 934 mRNA 0.55 4 10720158 10722022

Neighbor

gene id symbol gene type direction distance location
nanog NA coding downstream 20689 10697289 ~ 10699469 (-)
fen1 fen1 coding downstream 34219 10679795 ~ 10685939 (-)
LOC120552021 NA coding downstream 44850 10670430 ~ 10675308 (-)
LOC120552020 NA coding downstream 50597 10664868 ~ 10669561 (-)
LOC120552019 NA coding downstream 56923 10629660 ~ 10663235 (-)
rec8b NA coding upstream 3040 10725062 ~ 10743468 (-)
txndc5 txndc5 coding upstream 112845 10834867 ~ 10848296 (-)
eef1e1 eef1e1,LOC102782929 coding upstream 164518 10886540 ~ 10895407 (-)
slc35b3 slc35b3 coding upstream 222070 10944092 ~ 10956895 (-)
ofcc1 ofcc1 coding upstream 403111 11125133 ~ 11210500 (-)
G218986 NA non-coding downstream 3259 10715085 ~ 10716899 (-)
G218951 NA non-coding downstream 55375 10633287 ~ 10664783 (-)
LOC120552022 NA non-coding downstream 58432 10658465 ~ 10661726 (-)
G218940 NA non-coding downstream 121350 10597708 ~ 10598808 (-)
G218872 ngdn non-coding downstream 246545 10472123 ~ 10473613 (-)
G219113 NA non-coding upstream 656585 11378607 ~ 11477103 (-)
G219125 NA non-coding upstream 694710 11416732 ~ 11420755 (-)
G219130 tmem56,LOC103482516,LOC104925854,LOC107094156 non-coding upstream 719222 11441244 ~ 11445755 (-)
G219138 NA non-coding upstream 745072 11467094 ~ 11469317 (-)
G219169 NA non-coding upstream 1049829 11771851 ~ 11807316 (-)
G218950 NA other downstream 50631 10577399 ~ 10669527 (-)
LOC120552013 NA other downstream 104937 10604320 ~ 10615221 (-)
cngb3.1 LOC103363254,LOC102786718,LOC108428960,LOC104948783 other downstream 871917 9833462 ~ 9848241 (-)
LOC120551928 LOC104943218,LOC103369878,LOC100710535,LOC102301415,LOC101469805 other downstream 1749520 8957409 ~ 8970638 (-)
prkdc prkdc other downstream 1868432 8797781 ~ 8851726 (-)
bloc1s5 bloc1s5 other upstream 142263 10864285 ~ 10868787 (-)
pign pign,LOC104945957,LOC102796964 other upstream 1695326 12417348 ~ 12433035 (-)
bmi1a bmi1,commd3,LOC103371470,LOC106919738,LOC103482475 other upstream 2456238 13178260 ~ 13194142 (-)
pdk3a pdk3 other upstream 2966399 13688421 ~ 13696741 (-)
sema5a sema5a other upstream 3101436 13823458 ~ 13940381 (-)

Expression


Co-expression Network