neurod6a (LOC107736131)


Basic Information

Item Value
gene id neurod6a
gene name LOC107736131
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 4193845 ~ 4197469 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039789747.1
aggaaggagggaggatgaggaggaggggccGATGTTTGCTGCTGAAAGCCTGTCTGAGTGTCTGGATGCTCTCTGGAATGTAACACCAAAACTGGGTGAGAAGCTCATCGGTCCACTGACAGAAGGAGATTCACATTAAAATGGACCACAGTCTGTCAGATTATTGCCTCAGGTTGACTTGTCTAATTGAAGAAGAATAATAGGATACTGCTAAAAAGAAGGAGAAAATGCTAACTCTGCCTTTTGATGAGCCACCCTCCAACCAGACCGGCAGTCCCTTCCGGACCGGCTGGGCCGCCAACCAATTAGTCAGATCAGTTAAGCCAGAGCCTGGCAGAGCCCCGGAGGACACGTTTGAGTCCAGGAGAGAGAACGGAGAGAGGGATgacagagatgaggaggaggaggaggaggaagaggaaaaggaacAAGGCGGTGGTCAGAGAAGAAGGGGTTCATATACGAAGAAAGCGAGTCAGGCCCGGCTGGAGCGTGTCCGGCTGCGGCGCATCGAGGCCAATGCGCGGGAAAGGAACCGTATGCACAGTCTGAACAACGCGCTGGACCGCCTGAGGAAAGTGGTTCCCTGCCACTCCAGGACGCAGAAGCTGTCCAAAATAGAGACGCTGCGCCTGGCCAGGAACTACATCTGGGCCCTCAGCGAGATCCTAAACACCGGGAAGAGACCGGACCTGCTCACGTTCGTCCAGACTCTGTGCAAGGGCCTCTCCCAGCCCACCACTAGCCTGGTGGCCAGCTGTCTGCAGCTCAACCCCCGCAGCTTCATCTCGGAGCCAGGCGGGGAGTCCTTCCCCCTCTACCCAgcctaccaccaccaccacggGGTCGAGGCAGTGGGCTGCAGCTCGGCGGACAGTGCCAGACCCCTGGGCTCCTTCTGCGGGCCCTACGAGTCTCTGTATGACAGTCCCTCTCCGGACGGCTCCAGCCCTCTGGATGCAGGGACCCTCAACCCAGCCGTCAACTTCGACGGAATTTTCTCCCTGAAACGGGAGGAACCGGTGGACTACCGGAGCTGTCACTATGGCCTCCGCTACTGCTCCGTCAGCCAGGGCTCCTCCGCAGACCTGGGCCCATATGACGTCCGCCTGCGGGGACAGTTCTACCAGGCGCAGGAGGAACTGAACAAGCCTTTCACTTATTAAGGAACTATGTATATAGAGATGTTGATTAAATTGGAAACCCCAATATCATCCCGCTGATATTTTGGGGGGCCACATGGTAGGGCTGCATAATATATCgttgtttttttatcatcatcgTGATATCAACCGGCAGAATAAACACATCGTGAAAGGCTGCGACACATTGccaaagacactcagagatttttttgttAGTTGCGAGAAAATTTTATCAGAAatctgcactttaaaatgtaactttcgttttttttttttttgtgctgccTTCCATAATTAATTCAacgttcaatttgttcaataaaagaaagtcggaaattatttcctttcatttgatttaatccaacaagcagtttgttgtattttatcagaatactGAAAGACGAACTGAGAAAACTTTAACATCTGTTTACTGTATGTATCGCAAGTAATAGCGTTATCGCGATGTCCagcaacgttatcgcatatcacatattttcctcatatcgtgcagccctaccgcTTGGCTGCAGCCATCTGATGAATGATAGTTTATTGATAAATTCATCTAAACTGAAGGCTAATTGTCTGGGGAGCAGCGCCTTTCGACGAGGAATGCTGTGGCCTTGGAAGGAAAACgcgtacacacacgcacacgcacacacacacacacacacacacatacacacacgcactcacacacacacacatacacacacgcacatgca

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0006351 transcription, DNA-templated biological_process
GO:0050769 positive regulation of neurogenesis biological_process
GO:0005488 binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039789747.1 True 1870 mRNA 0.51 2 4193845 4197469

Neighbor

gene id symbol gene type direction distance location
LOC120552076 NA coding downstream 17302 4166077 ~ 4176543 (-)
cubn cubn coding downstream 33290 4066794 ~ 4160555 (-)
LOC120552072 LOC101479525,LOC102293327 coding downstream 143179 4007899 ~ 4050666 (-)
LOC120552547 LOC104953016,LOC108234711 coding downstream 292822 3888618 ~ 3901023 (-)
plag1 plag1,LOC102799649 coding downstream 501237 3669151 ~ 3692608 (-)
pde1ca pde1c,LOC105910890 coding upstream 80852 4278321 ~ 4306877 (-)
dtx3l1 LOC104939629 coding upstream 164886 4362355 ~ 4369344 (-)
trnas-gcu_21 NA coding upstream 196820 4394289 ~ 4394370 (-)
trnas-gcu_22 NA coding upstream 207002 4404471 ~ 4404552 (-)
trnas-gcu_23 NA coding upstream 208673 4406142 ~ 4406223 (-)
G217884 NA non-coding downstream 14927 4178696 ~ 4178918 (-)
G217828 NA non-coding downstream 289293 3904107 ~ 3904552 (-)
G217818 NA non-coding downstream 320211 3871733 ~ 3873634 (-)
G217817 NA non-coding downstream 349363 3844143 ~ 3844482 (-)
G217815 NA non-coding downstream 366792 3826554 ~ 3827053 (-)
G217905 NA non-coding upstream 65157 4262626 ~ 4262932 (-)
G217935 NA non-coding upstream 268514 4465983 ~ 4466440 (-)
G217960 NA non-coding upstream 368161 4565630 ~ 4566156 (-)
G217971 NA non-coding upstream 421147 4618616 ~ 4618865 (-)
G217976 NA non-coding upstream 562796 4760265 ~ 4762269 (-)
G217837 NA other downstream 252516 3936010 ~ 3941329 (-)
G217780 chchd7,LOC102799933 other downstream 489488 3692952 ~ 3704357 (-)
f3a NA other downstream 737801 3437802 ~ 3456044 (-)
LOC120552696 NA other downstream 850140 3315418 ~ 3343705 (-)
svila svil other downstream 1057631 2988926 ~ 3136214 (-)
G218019 NA other upstream 830036 5027505 ~ 5036704 (-)
G218085 LOC107687935 other upstream 1502760 5700229 ~ 5700576 (-)
G218453 adarb2 other upstream 3997460 8194929 ~ 8195879 (-)
G218471 NA other upstream 4232995 8430464 ~ 8430930 (-)
prkdc prkdc other upstream 4600312 8797781 ~ 8851726 (-)

Expression


Co-expression Network