rsu1 (rsu1,LOC102787280)


Basic Information

Item Value
gene id rsu1
gene name rsu1,LOC102787280
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 4466851 ~ 4510609 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039789748.1
GTGGCTTTCACATAAACTTCCGGTTGGGTGTCAGCTTGAAGCGAAGTCTCTATCAGAATTTCAAAAGCCAGtatatttctctttttcattcctttttttaatgttaGTTTTTCTTCGTGTCGCCATAGCAGCCTTCACATTCTCCCGCCGCTAACCtgtttacagaaaaaaaacatgtccaaGTCTTTGAAGAAGATAGTGGAGGAGAGTCGGGATAAGAACATTCCAGAGGTGGATATGTGCGACAGAGGCATTTCCAACATGCTGGACATCCCAGGACTATTCACTCTGTCTAACATCACGCAGCTGGTCCTCAGCCACAACAAGCTCACAGCGGTGCCTGCTAACATCTCCGAGCTGAAGAATCTGGAGGTTCTGAACATGTTCAACAACCAGATAGAGGAGCTGCCCACCCAGATCAGCAGCCTTCAGAAGTTGAAACACCTCAACCTCGGAATGAACCGTCTGAGCGGATTGCCCAGAGGATTTGGTTCATTGCCATCTCTGGAAGTGTTGGACCTGACCTACAACAACCTGGACCAGAACTCCCTGCCTGGAAACTTCTTCTACCTCaCCACACTTCGCGCTCTCTATCTGAGTGACAACGACTTCGAGGCCCTGCCTGCCGACATCGGGAAGCTGACCAAGCTGCAAATATTGAGTCTGAGGGATAACGATCTGATCTCGTTGCCCAAGGAGATCGGCGACTTGGCTCAACTCAAGGAGCTTCACATCCAGGGCAACAGACTGACCGTCCTGCCCCCTGAACTCGGTAATCTGGATCTGACCGGTCCTAAGCAGGTGTTTAAAGCAGAGAATAATCCCTGGGTCACTCCCATTGCGGACCAGTTCCAGCTGGGCGTCTCCCATGTGTTTGAATACGTGCGCTCTGAGACTTATAAGTAtctctATGGCAGACACATGCAGGCCAACCCCGAACCACCGAAGAAGAACAACGATAAGAGTAAGAAGATCAGCCGCAAACCGCTGGCCGCCAAGAACAAATGAAGAGAAGACCAACGATGGAGATTaatgcaagctcagcctgtcaaaCTCACTGCATGTgccttcttttcttctctctttttattttttttatagaaataaaCATTTTGTATTACGACATGTATGAAATATGTTTCTAAATATGTAGTGTTACATATAGTTTGGACTGTATTCCACTCTGCCTGAGTATAGatggatgtttgtttgttttttcaactcTCGTGAACAGTTTAAGTCTTGGTTTTGGTGCTACTTATCTAACTGCTTGGACACCCAGGTGACTACTGGTGACAGCTGCATAACTACCAGATCAGAGTCATTTAGAAGCTGTGTTAAGAATTCATTGTAATGTCATCCTTTGTCGCTTTAAATGCCGGTGGCTCCAGATGGCAAACCGAGTCACTGTAACTTCACATTGTGGGACATCAGCATCAACAAGTCCTGCAGGGCGAAACTTTTGAACTGCTATGATACCAAAGGCGAACATTTAACATGGGTGAGTCCAGATGCTCACAGATGTTTGGGACGCAACTTCAACGACTGCTACTGCGTACTTTCAGCTACGGATCCATTCAAAACCAgacaaaatgttcagctctgtAAGTGCATTTATCCTTGTTTTCAACTCTTCTGCCTTGTTATGCTGTTTTCGACATCATTGTGTAAGCGAATGGGAGGAATCTCCAAGTTCTCTTCCATCCCATTCCACTCTGAAGTTCTACTACTTCAGCTACAGACTTCATTTCAACTTTGAACAATCGCAAGACTTTGAACTTAACTTaaacttcagttttttttctgtatatttTAAGTATTTGAATTATGGCTGAGTTTATAATGGGTGTGTATTACCCTGCTTAAAGTGTGTCACGTGACCTGTGATGTCACCCACTGATCCTCttctgcttttaaaaaaaaaaaatcaccaggCTATTGAACTATTCACCTGTGTGGAGCTTCGTGATGTCGTTCAGCTTTCCCTCCCCAGTGCCGTTCAGCCCCTTCTTTTCAGACCATACATTTCATCCCTCagctcttaaaggaacacgccgacttattgggactttgtcttattcaccgtatacCCCAGTTCATAAACAcctttctcatctctgtgcgtgttgtaactctgtctgacgcacccaccgctagcctagcttagcacagatcctggaggtaacctaATGCTGTTTTTGTTCAAAAGTGTTTAGCAATGCAGCTCCTCTGTTTGATATTAATACAAACTAGGGCTCcaccatatgaggaaaatatctaattgccaTTCATTTGACCGACATTGCAATTGcgatcattattctcatttccaTTGAAAAATCGATTTAAATGATCATGGCGGGATTTTTGGCGAGTATTTGTACCAAAGAAAGATTCTTTTCTTCAGTCTGTAGAATGTGATTGTCTCTGCAGCACTACAAGACTTCACTCAGAATggtattttgcctttaacaaatattgtgccCCCCCGCCCGTGATTAGTATCTTATACTAGTCCAAATTGCGATAAAACTGTGATTAATTGTGCCGCCCTTATACAAACCAATTCTTCTTTCAGACAGTTCATTTCAACTTGCAGTGTCTCTAGCGATGTATTTCAGCTCAGAGTTTCTTTAGGTAAAGGGTTAGCTTCCAGTTTTTTTCAGCGGTGCAGTCTATGCACTGAGCCTTAAGATGTTTCAGGCTGTACATTTCAGATTTCTGCATTTTCAGCGATGCTTTGCACTTTATTTCAGCTCTCAGTATTCACAGACATTTTCTatacaaaatgcattttttagtttagttacttttcacGGTTTTACAATGCATGCTCAAAACACATTTGCTTTTCGTTGCTTCGATGTGCTAATGGCAgtgacacactaacccgataatcggccgtctgacagtctggcgaggtcagtgattCAAGTccgttcggtgtgttccgtgccgtcgtcagtggGAGAAGcagtcggccttcattttggccgatttgacatgttgcgtcagagggcgggcagtcggacccCATGActaatctgattggtggagtacTAACCCAGAAATTAtaagcgggatgagcgtgactaagcCTCTCAAAATTTGACGAAAATCTttgaaactgacctttgtcgttctgaaatgaagaccgattcagcaactgcacggcctatttctctcttaaaatttTTCAGGTGAACTATCTTCGTATATGCGATCGCATTCCGAAAAAAGCCGTCATTATGCCCGGTTGaaaaatccgggagcagccagacccacatgacgcgttcgtccaatcagctgccgttttttattttttgggcgacaatacagataagtgctgcctgctgttatggagacgtattacatgctcaagtcggcgtctcttcggtgtgttcagaggcactttttggacctcggggagccgactgatcagtccgactgccttttctgccgacggtcggccatcGGGTTGGTGCGTCAGGGGCTTAACGGATACTTTGTGACTGTACTTCACTCAGTTTGAACACTATGCTACTCCACACTGTATTTCCTGAATAGTGAATATTACACTCCCTCGTTCTCTCCctttgtctcctctctctcttgcttACAAACAAGCAGAAACTAGTGTTGCTGAATAGAATATGTATGTAAAGATAGCACAGCTGAGAAAAGAGCTGCAAGTGACTCACTGTACCTTCCACATTCTTTTTGTTAAGTTATTTTCCAAAGCTTCACCAAGTGTCCGTCACATTTCAGCCTGTTGCAAAGCTAAATTAATATAATCCATTCATAAAATTCATCGTGCTTTTATCACAGGCCAAAATATACTGAAAGTTCTTTGTGCTCGCTGTATCGAACACTTCaaataaaacaatcaaaatcAA
>XM_039789749.1
GTGGCTTTCACATAAACTTCCGGTTGGGTGTCAGCTTGAAGCGAAGTCTCTATCAGAATTTCAAAAGCCAGtatatttctctttttcattcctttttttaatgttaGTTTTTCTTCGTGTCGCCATAGCAGCCTTCACATTCTCCCGCCGCTAACCGTtgtttacagaaaaaaaacatgtccaaGTCTTTGAAGAAGATAGTGGAGGAGAGTCGGGATAAGAACATTCCAGAGGTGGATATGTGCGACAGAGGCATTTCCAACATGCTGGACATCCCAGGACTATTCACTCTGTCTAACATCACGCAGCTGGTCCTCAGCCACAACAAGCTCACAGCGGTGCCTGCTAACATCTCCGAGCTGAAGAATCTGGAGGTTCTGAACATGTTCAACAACCAGATAGAGGAGCTGCCCACCCAGATCAGCAGCCTTCAGAAGTTGAAACACCTCAACCTCGGAATGAACCGTCTGAGCGGATTGCCCAGAGGATTTGGTTCATTGCCATCTCTGGAAGTGTTGGACCTGACCTACAACAACCTGGACCAGAACTCCCTGCCTGGAAACTTCTTCTACCTCaCCACACTTCGCGCTCTCTATCTGAGTGACAACGACTTCGAGGCCCTGCCTGCCGACATCGGGAAGCTGACCAAGCTGCAAATATTGAGTCTGAGGGATAACGATCTGATCTCGTTGCCCAAGGAGATCGGCGACTTGGCTCAACTCAAGGAGCTTCACATCCAGGGCAACAGACTGACCGTCCTGCCCCCTGAACTCGGTAATCTGGATCTGACCGGTCCTAAGCAGGTGTTTAAAGCAGAGAATAATCCCTGGGTCACTCCCATTGCGGACCAGTTCCAGCTGGGCGTCTCCCATGTGTTTGAATACGTGCGCTCTGAGACTTATAAGTAG

Function

symbol description
rsu1 Predicted to be involved in signal transduction. Orthologous to human RSU1 (Ras suppressor protein 1).

NR:

description
ras suppressor protein 1 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039789748.1 True 3896 mRNA 0.44 9 4466851 4510609
XM_039789749.1 False 908 mRNA 0.49 8 4492419 4510609

Neighbor

gene id symbol gene type direction distance location
c1ql3a c1ql3,LOC102786996 coding downstream 11322 4433632 ~ 4455529 (-)
trnas-gcu_30 NA coding downstream 40471 4426299 ~ 4426380 (-)
trnas-gcu_29 NA coding downstream 42151 4424619 ~ 4424700 (-)
trnas-gcu_28 NA coding downstream 44697 4422073 ~ 4422154 (-)
trnas-gcu_23 NA coding downstream 60628 4406142 ~ 4406223 (-)
LOC120552074 NA coding upstream 14692 4525301 ~ 4532240 (-)
LOC120552070 plppr4,LOC102778844 coding upstream 59808 4570417 ~ 4613727 (-)
trnas-gcu_31 NA coding upstream 286872 4797481 ~ 4797562 (-)
trnas-gcu_32 NA coding upstream 288381 4798990 ~ 4799071 (-)
trnas-gcu_33 NA coding upstream 293096 4803705 ~ 4803786 (-)
G217935 NA non-coding downstream 411 4465983 ~ 4466440 (-)
G217905 NA non-coding downstream 203919 4262626 ~ 4262932 (-)
G217884 NA non-coding downstream 287933 4178696 ~ 4178918 (-)
G217828 NA non-coding downstream 562299 3904107 ~ 3904552 (-)
G217818 NA non-coding downstream 593217 3871733 ~ 3873634 (-)
G217960 NA non-coding upstream 55021 4565630 ~ 4566156 (-)
G217971 NA non-coding upstream 108007 4618616 ~ 4618865 (-)
G217976 NA non-coding upstream 249656 4760265 ~ 4762269 (-)
G217977 NA non-coding upstream 275784 4786393 ~ 4786618 (-)
G217988 NA non-coding upstream 379703 4890312 ~ 4890528 (-)
G217837 NA other downstream 525522 3936010 ~ 3941329 (-)
G217780 chchd7,LOC102799933 other downstream 762494 3692952 ~ 3704357 (-)
f3a NA other downstream 1010807 3437802 ~ 3456044 (-)
LOC120552696 NA other downstream 1123146 3315418 ~ 3343705 (-)
svila svil other downstream 1330637 2988926 ~ 3136214 (-)
G218019 NA other upstream 516896 5027505 ~ 5036704 (-)
G218085 LOC107687935 other upstream 1189620 5700229 ~ 5700576 (-)
G218453 adarb2 other upstream 3684320 8194929 ~ 8195879 (-)
G218471 NA other upstream 3919855 8430464 ~ 8430930 (-)
prkdc prkdc other upstream 4287172 8797781 ~ 8851726 (-)

Expression


Co-expression Network