LOC120552080 (LOC107732049,LOC100535932)


Basic Information

Item Value
gene id LOC120552080
gene name LOC107732049,LOC100535932
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 4313351 ~ 4323124 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039789752.1
GGAGAAACCTTGTTGAAGCAGTTTGGAGCAAAATGCATCCAGTCCGTTTGGTTGTCGCAGTGGTCCTGACAGTTGGCGCCTCTGAGCATTGTTGTGCCGGACCGCTCCATGCTCAGTGCAAAGTAGAATGGTACTTTGGGATCCCATGCCAAGTGGTTTATGAATCCCTGGTCTCACAGATTAAGAAGTGGAGAACCATGGCTGGCTGCACCCTGGGAGGACAGAGGTGCCTttacaagCTGCAGTCTGCCTCGGTCCACTTTATAGCAGCTAAACACACCACGCCCTTTAAGAGGTACGTGGACGACATCAACTTCCGGCTGGTCTCCTATCACTTCTTCACTTGCTGTCACGTTTCGGCCATGTCCGTCTCTGAGACCTGGTATGCCATCAAAGACCATGGCACCAACTACTGCAACCTCTACAACCTCATAGAAGGAAGTGGTCTAACCGAAGCCAGAGGTTATAAAGAGGTCACCAGTGACTTCCTGTGTACCCAGCGGTCCTCTGCTAACTGCACCGTCTACTGACTGATTATCTAGGATTACCAGAGACCATCACAGCCGAGTTGCAAAGTAACGAATTACAATTACTTACGTTAATGTAATTGAGAAGTTTTTTTAGTgtgcttttactttttaaagtagtttttaaa

Function

NR:

description
PREDICTED: uncharacterized protein LOC107732049

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039789752.1 True 655 mRNA 0.48 5 4313351 4323124

Neighbor

gene id symbol gene type direction distance location
LOC120552069 NA coding upstream 63045 4221909 ~ 4250306 (+)
trnas-gcu_20 NA coding upstream 249276 4063994 ~ 4064075 (+)
LOC120552545 NA coding upstream 378225 3900951 ~ 3935126 (+)
arhgef4 arhgef4 coding upstream 440049 3714311 ~ 3873302 (+)
steap2 steap2 coding upstream 675318 3570272 ~ 3638033 (+)
trnaa-cgc_15 NA coding downstream 70380 4393504 ~ 4393576 (+)
trnas-gcu_24 NA coding downstream 87756 4410880 ~ 4410962 (+)
trnas-gcu_25 NA coding downstream 89426 4412550 ~ 4412631 (+)
trnas-gcu_26 NA coding downstream 91798 4414922 ~ 4415003 (+)
trnas-gcu_27 NA coding downstream 95968 4419092 ~ 4419173 (+)
G217795 NA non-coding upstream 372026 3940796 ~ 3941325 (+)
G217788 NA non-coding upstream 486293 3826556 ~ 3827058 (+)
LOC120552544 NA non-coding upstream 604632 3705024 ~ 3708719 (+)
G217769 NA non-coding upstream 646858 3664861 ~ 3666493 (+)
G217768 NA non-coding upstream 648588 3664357 ~ 3664763 (+)
G217925 NA non-coding downstream 79925 4403049 ~ 4403369 (+)
G217927 NA non-coding downstream 113299 4436423 ~ 4436735 (+)
G217956 NA non-coding downstream 200470 4523594 ~ 4523896 (+)
G217969 NA non-coding downstream 332141 4655265 ~ 4655474 (+)
G217964 NA non-coding downstream 436496 4759620 ~ 4762250 (+)
ppp1r17 NA other upstream 51753 4256048 ~ 4261598 (+)
chchd7 chchd7,LOC102799933 other upstream 608976 3670420 ~ 3704375 (+)
G217723 cnn3 other upstream 769566 3495450 ~ 3543785 (+)
LOC120552392 mtpap other upstream 1079529 3220615 ~ 3233822 (+)
G217606 svil other upstream 1291709 3006283 ~ 3021642 (+)
trdmt1 LOC104946219,LOC101070638 other downstream 188589 4511713 ~ 4522706 (+)
LOC120552660 NA other downstream 3037482 7360606 ~ 7373347 (+)
LOC120552265 LOC101478037,LOC102216221,LOC100695799 other downstream 4200175 8523299 ~ 8596356 (+)
G218441 LOC101478037,LOC102216221,LOC100695799 other downstream 4227659 8550783 ~ 8606578 (+)
G218445 NA other downstream 4233092 8556216 ~ 8557253 (+)

Expression


Co-expression Network