si:ch73-173p19.1 (LOC103363515,LOC104954586)


Basic Information

Item Value
gene id si:ch73-173p19.1
gene name LOC103363515,LOC104954586
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 19658889 ~ 19666720 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039789762.1
TTCTTGTTGATATTCAGTCAACGGGCTCGGTAGTGTTGCTAGCTGGAGGCGCTGCAGACCCAACCAGGAAGTCAACAAAGTTGCTAGTTAATATTAGCTTCACTTTGATTTTCATCCATTAATGTTATAACGACATCATGAGTTCCGCTGCCCCTCCGACTATTGGGGAGTTATTCCTCATCCTCAGTGAGATGGGGTTCTCAGAGGAACAGATCCAGGCAGCTGTCCAGGCGGGGCATTTTTCTGTGTCAGACGCGGCTGAGTGGCTCTTGCAGGGTCAGTATCCACGGCACAGGTTGGTCAAGCAGTCATCACAGCCAGCTGAGacagcattttctgctttcaacCCACCCAAAGAGGCAGCAAGCACTTcagagacacaaacatctcCTTCTGACAGCAGAGCGTCCCCTTCATTGGTCCTGAGACCATCACAGTCAGGCACCCTGTCCCCAGACCCACTACCAGTCGAGTCCCGCATCAAACAGGACAAGAGTGACTTTGAAGAGCAGCAGAGACAACGTGGTGCTCAGGAGGCCAaagcagagagaaaacaaaagaaacagGAGCGCGAGTTGGTGTTGAAGCGGATAGCTGAGGATCGGAGGAGCTTGCAGGAGAAGAACCAGACCAGTGCTGCCACAGAGATGTCTCCTTCTAGTGGTCAAGGACAGAAGCTTGGAGGAAAGATTCAGACTAATGTAGATAACAACTGCGTCCTCATGATTCGGCTCCCGTCCGGCGAGTCCATGCGTGAACGCTTCCCAGCTGATGCTCCTCTTCGCAGTGTCGTGGAGCACATCACCGGACGTCACCCCTCCCTagcctccttttctctcctccagGGTTTTCCACGGAAACGCTTTGGGGAGGCAGAACTCGCTTGTTCACTGCACTCTCTTGGCCTCACACCCAACGCTGCACTGTGTATTCAGACCACTCCTCCAGAGACGCCTCAGGATCCTCCGAGTCCTGCAGATCCACCATCAGCGGTACAGAATGAGCCGTCTCCTTGTGATGTGGCTCCTCAGCCACATATCCCTGTCCAGGAGGGGGTGGGAGGACAGGACCTTGTTCTACCTCCTCCACTACCCAACCAGCTGTGGGAAGAGGCTGTGAATTACGCAGGGATACCTGGAGTTGGTCCTTCCCTGTCCGGGCCATCTCACTTCTGGGGCCGAGGCCAGAGGTTGGTTCCTGGTCAGGCCGAGGAAGCTGCTGGCATAGAGGTTGATGAGGAAcaaggagaagaggaagaaccACCTTACATGCTTAACGGAATGCCACGGCTGCCTTTCTTTCCAGAGAATAGATTTCGTGGAGAATTTGAGCGCAGGCACCACTGGCCAGAGCAAGGCAATCGACTCAGGGAGGCTCCAGAAGACAACCCGGCAGAGCCTGAGGATGCGGGAGGTCAGGAGGCACCTGGAGCTGCAGGTCTGGCTGCAGTGGAGCGCCTTCAAAGAGCTGCGCAGCAAGAAGACCCCCCTGCCTCCCAGGGACAACCATCACCCCCTAAAAAACCCTTCAGGGCACCCAGCGTGTCGTCCCTATGTGCCTTGGCAACCCGCGCAACTGTCCACCTCATGACTGctCCCAGCATGCAGTACATCAGCAGTCTGGCATGCCTCACCCCGGAGCTAGCAGAGCTTCTGCTGAACCACATGTCCCGTGAAAGGCTCCTACGTCCACGCACCCTGGAGCTCTTCTTCGGCTGCCCATTGCAGAAGTTTGTTCTAAACTGCTACCCTTACTCCACCAACGAGCTCCTGCGGCAGTTACGGGCCTTCACAGCACTGAAGCATCTGAGTCTGGTCAACTCGCCTCTCATCACTGACACTGGGCTGTCAATCCTGTCCAGCCTGGTCAAACTCCAGTACCTGAACCTGGCCTCCTGTAGCAAACTGACTGACTCCTGTCTGCAGCATATCACAGGTTTGAAGAGCCTGTGTTTCCTGTCCCTGGACCACACCAAAGTGACGGATGCTGGGATGGTTCTATATCTCCAGTCAGCTCCGTGCTGTCTCTCTCAGCTCAGCCTGAACCAGACGGCTGTGACTGAAGCCACACTTTTAGTCCTGCCCACCTGTGTGCCACAATTGCGGCTCCTCAGTATCAAGCAGACTAAGGTCAGGGATGTGTCGGCTTTGGCAGAGCTGTCCAGCCTGCAGACTCTTAACCTGGATGGGACAGGTGTGACTGAAAGCTCTCTAGAGCACCTGGCCACCCATCCTGCCCTGACTTCCCTGAGTTTGGCGGGAATCCCCGAAGCGGATGGTAACCACGCCCTGCAGATCATCTCAGGTCTAAAGTTGACTCACCTGACCCTCCCTGGACGCCACTCAGTGACAGACAGCGGGTTGTCATTCCTCTCTAGACTGTCTCAGCTCTTAGAGCTGGACCTGACTGACTACACGCACGTCACAGACCAGGGAGTCAGCCAGCTCTCCATCATGACCAGGTTGAAGAAGCTGTCACTTAGCAACACACAGGTGACAGATGCAGGGCTCCCCTCCCTGCGTGGCCTGCAGGACCTGCAGGAGCTCTGTTTGGACCGAACAGCAGTGACCAGCCGAGGAGTGGCCGAACTCATCAGCTGTCTGCCGCACCTCCAGGTGTTGGGGTTAGCCAGCACTCAGGTGGGAGACACAGTAGTGAGGAGAGGTCTGATCCGCTGCAATCAACTTGTGAAGCTTAATCTCAGCCGCACACGGATCACAGATCACGGTATAAAGTTCTTGAAACGCATGCATCTGGCCCAGGTGAACCTTGATGGCACCGGTGTGAGTCTGATGGGTATTGCGAGCCTTCTCTCTTTGACTAACATCAGCAGCATTCGGGCCAGCAACACCCGCAGCATTCCTCCTGACGAGGTCTCGGATGAGGAGTGGGAAGCCCAGTGAGCATCGATAACCTTCAGTTGGTCCGTGCATACTGTACCTAAGCGCGTCTCTGACTGCTGCGGTCCCCTTTTAGCCCCTGAAACATGCTGCCATCGGGAtactctaaaaaataaaaaaacagcataacTGAAACACTCCTTCTATTTGCACTGTTTCTACTGCAGCTAGTGCCACTAATCTGTCAATCACGCACGTTACCAAGTTGAAACCTTAAATGAGAGCCTGGTATTTAAATACTAGGCCATTAACATTTACATATATAGAATCAATCTGCATTGACTTGCATACACACTGCAGCCCTTTTGTCTCTGGAGAAACTCCACCTGACAAACTTTAAAGCTTTACGTGCAGCCTTATAGGTTGGAGCTATCTGTGTTTCCCCCGGTTGGCACTTTTTGAGCCGACAGGCAggaacaaaactaaatgttggAAATGTAACGTAACACCGCTTGTATTTTCAGACAGTAATGACTAATTAAATGAAAacctaaataaactaaatatggTTGCATAATTTATTTTGAAGGATGTGAAGGCAGATTATCTCTTCCAGTAATCATCCTATCACTTATTAAAAGTAACATTGAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC103363515

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039789762.1 True 3491 mRNA 0.53 17 19658889 19666720

Neighbor

gene id symbol gene type direction distance location
chpf2 chpf2 coding downstream 10088 19639856 ~ 19648801 (-)
asap1b asap1 coding downstream 73441 19518530 ~ 19585448 (-)
fam49bb fam49b,LOC104954579,LOC105915818,LOC103377397,LOC107085391 coding downstream 144852 19475880 ~ 19514037 (-)
ankha ankh coding downstream 328335 19315583 ~ 19330554 (-)
vps41 vps41 coding downstream 445237 19196583 ~ 19213652 (-)
kif9 NA coding upstream 222962 19889682 ~ 19908076 (-)
cdv3 cdv3 coding upstream 283261 19949981 ~ 19954961 (-)
tmem108 LOC107589950 coding upstream 291564 19958284 ~ 19999250 (-)
topbp1 topbp1 coding upstream 335736 20002456 ~ 20018989 (-)
LOC120552713 dnajc13 coding upstream 353413 20020133 ~ 20055209 (-)
G221143 abcf2 non-coding downstream 2429 19652354 ~ 19656460 (-)
G221138 NA non-coding downstream 57950 19600706 ~ 19600939 (-)
G221095 LOC102309907,LOC101472733,LOC102788342,LOC101061645,LOC104929597 non-coding downstream 114497 19517372 ~ 19544392 (-)
G221090 NA non-coding downstream 212595 19446045 ~ 19446294 (-)
G221088 NA non-coding downstream 219350 19436966 ~ 19439539 (-)
G221146 NA non-coding upstream 2984 19669704 ~ 19669954 (-)
G221149 NA non-coding upstream 12348 19679068 ~ 19730782 (-)
G221160 NA non-coding upstream 51728 19718448 ~ 19719622 (-)
LOC120551913 NA non-coding upstream 57379 19724099 ~ 19754508 (-)
G221150 NA non-coding upstream 83385 19750105 ~ 19751294 (-)
G221048 ankh other downstream 331995 19315591 ~ 19326894 (-)
mettl4 mettl4 other downstream 709394 18938913 ~ 18949495 (-)
LOC120552352 colec12,LOC102798044 other downstream 847945 18772977 ~ 18810944 (-)
G220833 NA other downstream 960919 18610236 ~ 18697970 (-)
si:ch73-174h16.4 LOC103364270,LOC104947970 other downstream 1175113 18426762 ~ 18483776 (-)
LOC120552536 fbxl7 other upstream 1168458 20835178 ~ 20862688 (-)
rbis LOC101064519,LOC103367294,LOC102312013 other upstream 1550960 21217680 ~ 21221667 (-)
tfr1b NA other upstream 2323297 21990017 ~ 22011086 (-)
LOC120552473 NA other upstream 2447662 22114382 ~ 22120611 (-)
smpx smpx other upstream 2536047 22202767 ~ 22218381 (-)

Expression


Co-expression Network