LOC120552124


Basic Information

Item Value
gene id LOC120552124
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 22679691 ~ 22688402 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039789868.1
caacccaACTGCTCTCAGCTTATACTACACTGATAAATCAGAGTACACGATAGAGTAGTCCAGTGTGCCACTGCTCTTACTTTAATTTGACCGCATAGTGTTTGGGGGGGGTTTTGGCCACGTGGATATGAAGGCCTTTCAGGTCCTGTTCATGCTTCTCCTGACTGCTGCGGCAGCAGACGGTCAGTCTTTCCACCCGGGAAAATGCCCGCAGCCACCCGTTCAGGAGGACTTCAACGTTACAAGGTACATGGGCACCTGGTATGAAATAGAGAAGCTCCCAGCTGTATTTGAAAGAGGAAAATGCAACCAAGCAACGTACAGTCTTCTCGCTGATGGGACGGTCAAAGTTCACAATTCAGAGCTGGTGCTTAATGGGAAGATAAATTCAATTGAGGGTGTTGCCAAAGTGAAAAACTCTTCTCAACCTGCTATTCTGGCTGTCAGCTTCTTTAAAGGTGTTCCAGACAGTCCCTACTGGGTACTGGACACAGACTACCAGTCATATTCTCTGGTGTACTCTTGTTCGGACGTGTTTGGCCTTTTCCACGTTGACTACGCCTGGATCCTGGCTCGCACTCGGGTGTTGACTGAGGATGTCATTAGCCAGTTACACGATGAGATGGCTTCTGCTGGTGTCAACTTAAACCGCCTTACAGTCAGTAATCAGACTGGTTGTGACCAGACCACAGCATATGATTTCCCCATATCTGGGACACGGTGGCATCCagagaaaaatacatttgaatggGGGAGGCCTTACATTCCACACTCTCCATCAGCTGTCAAGACCACCTTCTATGTGGCTGAATTATCTGTCAATGAAGGGCCGTTTGGATTTGAAGTCTGGGCAGACGGTGGGAGGATGGATGTAGGACTAGATCCGTCGTCTGCTGGAAAGGCAGTCTCAGGTTCAGCATGCGGATGCTGGGAGTCCAAATGCAAATCAAATTGAGCAAGAACAGATGAGAGTTGCATATTGTGGAAAAACTGTATGCCAATGTTGTGCTTAGGCACAGGGACAGGATGGAGGTTAGGGCCTCCTCAAACACTCGTTCTGGTAGCCTGAAGCATTCCTCGAAGAAGTTCACCAGAGACTGGCTGAGGTGCTGCCTTGTTGCTTCACTGTGAATGAAGTGGCCTTCATCTGGGTAGATCTGAGACACAAAGAATAGGTGTGTGCCAGGACGAGGAGACAACCGGACGGCGGCACCCCATGAAGGCTAAGTGTAGCATTTGCTATATTGATGGACCCCAGGGGACTACACCTCTGACTTCAGATACAAAAGGAGTAATGCCACCTGCAAAAGTTTTCAGATGACTCTGCAATTGTGGGTTGTATCAGCGTACAACAGGAAGAGGAATACAAAGGACTGGTGGACTACTTTTTTGGACGGTGCAAACGGAACCACCTGCAGCAAGACAAAGGAGCTGACAGTGGACTTCCGCAGCACTAAGCCTTCTCTGACACCTGCATCCATCGAATGGGACGATGTTCAGGTGGCTCACTCCTATAAATACCTTGGAGTGCACCTGGACAACAGGCTACAGTGGGATGGAACCCAGAGGCCCTCTACGAAAAGGGACAAGAGCCAGCTATACTTCCTGTGGAGGCTCAGAGGCTTCAACATCTGCAACAGAATACTGCAGATCAGAGACGCTAGTAAGCTCAACAAGTTAGTCAGGCCAGATCAGTGAGTGGAATTGAGCTGGACTCTCTGGAGGTGGTGACGGAGAAGTGGATGCTGTCCAAGTTGGTCAGCATCCTGAACAACATCCCCCATCCCTCCATGACATGCTGGTCGAGAAGAGGAGAGTCTTCAGCCAAAAATTCATACCCAGGAGGTCATTCCTGCTGGTGGccatcaaattttttttattctgctgGACCAACTGGTCATAGACTGCTGAGATCCTTACAGACTCACTAAGTGAATAGCATTTCTGCAACTCTGACATAGTGCtatctttttaaaatataattataataacttCCAATCTGCACACTGTATGAATGCACATGTTTATAGGACATACTTTTTTGATTGTGATTCCTTGCCCTATTCTGTcttcattgttttctttttgtctatATATCTGATGGTTTACTTCTGCTGGAGGTAGTAGCACCCCTACTACCTACTACCCTAAGCctgcctatttttttttaactcaagtaAACCGGCTGAGAATAAGGTTAACAAGATTAGtgattgtattttttgtttgtttgtttattttcttatGGTTTGATGGGTTTAAGGTCAGTTGTGTTTTGTTGACCTTGGCCCACCCTGGGTTCTGACTAGGATCCCCCCTGTGTTCCTGTGGGACTATAAATAAATCAGATTGTTACCACTG
>XM_039789869.1
cccaACTGCTCTCAGCTTATACTACACTGATAAATCAGAGTACACGATAGAGTAGTCCAGTGTGCCACTGCTCTTACTTTAATTTGACCGCATAGTGTTTGGGGGGGGTTTTGGCCACGTGGATATGAAGGCCTTTCAGGTCCTGTTCATGCTTCTCCTGACTGCTGCGGCAGCAGACGGTCAGTCTTTCCACCCGGGAAAATGCCCGCAGCCACCCGTTCAGGAGGACTTCAACGTTACAAGGTACATGGGCACCTGGTATGAAATAGAGAAGCTCCCAGCTGTATTTGAAAGAGGAAAATGCAACCAAGCAACGTACAGTCTTCTCGCTGATGGGACGGTCAAAGTTCACAATTCAGAGCTGGTGCTTAATGGGAAGATAAATTCAATTGAGGGTGTTGCCAAAGTGAAAAACTCTTCTCAACCTGCTATTCTGGCTGTCAGCTTCTTTAAAGGTGTTCCAGACAGTCCCTACTGGGTACTGGACACAGACTACCAGTCATATTCTCTGGTGTACTCTTGTTCGGACGTGTTTGGCCTTTTCCACGTTGACTACGCCTGGATCCTGGCTCGCACTCGGGTGTTGACTGAGGATGTCATTAGCCAGTTACACGATGAGATGGCTTCTGCTGGTGTCAACTTAAACCGCCTTACAGTCAGTAATCAGACTGGTTGTGACCAGACCACAGCATATGATTTCCCCATATCTGGGACACGGTGGCATCCagagaaaaatacatttgaatggGGGAGGCCTTACATTCCACACTCTCCATCAGCTGTCAAGACCACCTTCTATGTGGCTGAATTATCTGTCAATGAAGGGCCTCCTCAAACACTCGTTCTGGTAGCCTGAAGCATTCCTCGAAGAAGTTCACCAGAGACTGGCTGAGGTGCTGCCTTGTTGCTTCACTGTGAATGAAGTGGCCTTCATCTGGGTAGATCTGAGACACAAAGAATAGGTGTGTGCCAGGACGAGGAGACAACCGGACGGCGGCACCCCATGAAGGCTAAGTGTAGCATTTGCTATATTGATGGACCCCAGGGGACTACACCTCTGACTTCAGATACAAAAGGAGTAATGCCACCTGCAAAAGTTTTCAGATGACTCTGCAATTGTGGGTTGTATCAGCGTACAACAGGAAGAGGAATACAAAGGACTGGTGGACTACTTTTTTGGACGGTGCAAACGGAACCACCTGCAGCAAGACAAAGGAGCTGACAGTGGACTTCCGCAGCACTAAGCCTTCTCTGACACCTGCATCCATCGAATGGGACGATGTTCAGGTGGCTCACTCCTATAAATACCTTGGAGTGCACCTGGACAACAGGCTACAGTGGGATGGAACCCAGAGGCCCTCTACGAAAAGGGACAAGAGCCAGCTATACTTCCTGTGGAGGCTCAGAGGCTTCAACATCTGCAACAGAATACTGCAGATCAGAGACGCTAGTAAGCTCAACAAGTTAGTCAGGCCAGATCAGTGAGTGGAATTGAGCTGGACTCTCTGGAGGTGGTGACGGAGAAGTGGATGCTGTCCAAGTTGGTCAGCATCCTGAACAACATCCCCCATCCCTCCATGACATGCTGGTCGAGAAGAGGAGAGTCTTCAGCCAAAAATTCATACCCAGGAGGTCATTCCTGCTGGTGGccatcaaattttttttattctgctgGACCAACTGGTCATAGACTGCTGAGATCCTTACAGACTCACTAAGTGAATAGCATTTCTGCAACTCTGACATAGTGCtatctttttaaaatataattataataacttCCAATCTGCACACTGTATGAATGCACATGTTTATAGGACATACTTTTTTGATTGTGATTCCTTGCCCTATTCTGTcttcattgttttctttttgtctatATATCTGATGGTTTACTTCTGCTGGAGGTAGTAGCACCCCTACTACCTACTACCCTAAGCctgcctatttttttttaactcaagtaAACCGGCTGAGAATAAGGTTAACAAGATTAGtgattgtattttttgtttgtttgtttattttcttatGGTTTGATGGGTTTAAGGTCAGTTGTGTTTTGTTGACCTTGGCCCACCCTGGGTTCTGACTAGGATCCCCCCTGTGTTCCTGTGGGACTATAAATAAATCAGATTGTTACCACTG
>XM_039789870.1
caACTGCTCTCAGCTTATACTACACTGATAAATCAGAGTACACGATAGAGTAGTCCAGTGTGCCACTGCTCTTACTTTAATTTGACCGCATAGTGTTTGGGGGGGGTTTTGGCCACGTGGATATGAAGGCCTTTCAGGTCCTGTTCATGCTTCTCCTGACTGCTGCGGCAGCAGACGGTCAGTCTTTCCACCCGGGAAAATGCCCGCAGCCACCCGTTCAGGAGGACTTCAACGTTACAAGGTACATGGGCACCTGGTATGAAATAGAGAAGCTCCCAGCTGTATTTGAAAGAGGAAAATGCAACCAAGCAACGTACAGTCTTCTCGCTGATGGGACGGTCAAAGTTCACAATTCAGAGCTGGTGCTTAATGGGAAGATAAATTCAATTGAGGGTGTTGCCAAAGTGAAAAACTCTTCTCAACCTGCTATTCTGGCTGTCAGCTTCTTTAAAGGTGTTCCAGACAGTCCCTACTGGGTACTGGACACAGACTACCAGTCATATTCTCTGGTGTACTCTTGTTCGGACGTGTTTGGCCTTTTCCACGTTGACTACGCCTGGATCCTGGCTCGCACTCGGGTGTTGACTGAGGATGTCATTAGCCAGTTACACGATGAGATGGCTTCTGCTGGTGTCAACTTAAACCGCCTTACAGTCAGTAATCAGACTGGTTGTGACCAGACCACAGGGCCGTTTGGATTTGAAGTCTGGGCAGACGGTGGGAGGATGGATGTAGGACTAGATCCGTCGTCTGCTGGAAAGGCAGTCTCAGGTTCAGCATGCGGATGCTGGGAGTCCAAATGCAAATCAAATTGAGCAAGAACAGATGAGAGTTGCATATTGTGGAAAAACTGTATGCCAATGTTGTGCTTAGGCACAGGGACAGGATGGAGGTTAGGGCCTCCTCAAACACTCGTTCTGGTAGCCTGAAGCATTCCTCGAAGAAGTTCACCAGAGACTGGCTGAGGTGCTGCCTTGTTGCTTCACTGTGAATGAAGTGGCCTTCATCTGGGTAGATCTGAGACACAAAGAATAGGTGTGTGCCAGGACGAGGAGACAACCGGACGGCGGCACCCCATGAAGGCTAAGTGTAGCATTTGCTATATTGATGGACCCCAGGGGACTACACCTCTGACTTCAGATACAAAAGGAGTAATGCCACCTGCAAAAGTTTTCAGATGACTCTGCAATTGTGGGTTGTATCAGCGTACAACAGGAAGAGGAATACAAAGGACTGGTGGACTACTTTTTTGGACGGTGCAAACGGAACCACCTGCAGCAAGACAAAGGAGCTGACAGTGGACTTCCGCAGCACTAAGCCTTCTCTGACACCTGCATCCATCGAATGGGACGATGTTCAGGTGGCTCACTCCTATAAATACCTTGGAGTGCACCTGGACAACAGGCTACAGTGGGATGGAACCCAGAGGCCCTCTACGAAAAGGGACAAGAGCCAGCTATACTTCCTGTGGAGGCTCAGAGGCTTCAACATCTGCAACAGAATACTGCAGATCAGAGACGCTAGTAAGCTCAACAAGTTAGTCAGGCCAGATCAGTGAGTGGAATTGAGCTGGACTCTCTGGAGGTGGTGACGGAGAAGTGGATGCTGTCCAAGTTGGTCAGCATCCTGAACAACATCCCCCATCCCTCCATGACATGCTGGTCGAGAAGAGGAGAGTCTTCAGCCAAAAATTCATACCCAGGAGGTCATTCCTGCTGGTGGccatcaaattttttttattctgctgGACCAACTGGTCATAGACTGCTGAGATCCTTACAGACTCACTAAGTGAATAGCATTTCTGCAACTCTGACATAGTGCtatctttttaaaatataattataataacttCCAATCTGCACACTGTATGAATGCACATGTTTATAGGACATACTTTTTTGATTGTGATTCCTTGCCCTATTCTGTcttcattgttttctttttgtctatATATCTGATGGTTTACTTCTGCTGGAGGTAGTAGCACCCCTACTACCTACTACCCTAAGCctgcctatttttttttaactcaagtaAACCGGCTGAGAATAAGGTTAACAAGATTAGtgattgtattttttgtttgtttgtttattttcttatGGTTTGATGGGTTTAAGGTCAGTTGTGTTTTGTTGACCTTGGCCCACCCTGGGTTCTGACTAGGATCCCCCCTGTGTTCCTGTGGGACTATAAATAAATCAGATTGTTACCACTG
>XM_039789871.1
aACTGCTCTCAGCTTATACTACACTGATAAATCAGAGTACACGATAGAGTAGTCCAGTGTGCCACTGCTCTTACTTTAATTTGACCGCATAGTGTTTGGGGGGGGTTTTGGCCACGTGGATATGAAGGCCTTTCAGGTCCTGTTCATGCTTCTCCTGACTGCTGCGGCAGCAGACGGTCAGTCTTTCCACCCGGGAAAATGCCCGCAGCCACCCGTTCAGGAGGACTTCAACGTTACAAGGTACATGGGCACCTGGTATGAAATAGAGAAGCTCCCAGCTGTATTTGAAAGAGGAAAATGCAACCAAGCAACGTACAGTCTTCTCGCTGATGGGACGGTCAAAGTTCACAATTCAGAGCTGGTGCTTAATGGGAAGATAAATTCAATTGAGGGTGTTGCCAAAGTGAAAAACTCTTCTCAACCTGCTATTCTGGCTGTCAGCTTCTTTAAAGGTGTTCCAGACAGTCCCTACTGGGTACTGGACACAGACTACCAGTCATATTCTCTGGTGTACTCTTGTTCGGACGTGTTTGGCCTTTTCCACGTTGACTACGCCTGGATCCTGGCTCGCACTCGGGTGTTGACTGAGGATGTCATTAGCCAGTTACACGATGAGATGGCTTCTGCTGGTGTCAACTTAAACCGCCTTACAGTCAGTAATCAGACTGGTTGTGACCAGACCACAGGGCCTCCTCAAACACTCGTTCTGGTAGCCTGAAGCATTCCTCGAAGAAGTTCACCAGAGACTGGCTGAGGTGCTGCCTTGTTGCTTCACTGTGAATGAAGTGGCCTTCATCTGGGTAGATCTGAGACACAAAGAATAGGTGTGTGCCAGGACGAGGAGACAACCGGACGGCGGCACCCCATGAAGGCTAAGTGTAGCATTTGCTATATTGATGGACCCCAGGGGACTACACCTCTGACTTCAGATACAAAAGGAGTAATGCCACCTGCAAAAGTTTTCAGATGACTCTGCAATTGTGGGTTGTATCAGCGTACAACAGGAAGAGGAATACAAAGGACTGGTGGACTACTTTTTTGGACGGTGCAAACGGAACCACCTGCAGCAAGACAAAGGAGCTGACAGTGGACTTCCGCAGCACTAAGCCTTCTCTGACACCTGCATCCATCGAATGGGACGATGTTCAGGTGGCTCACTCCTATAAATACCTTGGAGTGCACCTGGACAACAGGCTACAGTGGGATGGAACCCAGAGGCCCTCTACGAAAAGGGACAAGAGCCAGCTATACTTCCTGTGGAGGCTCAGAGGCTTCAACATCTGCAACAGAATACTGCAGATCAGAGACGCTAGTAAGCTCAACAAGTTAGTCAGGCCAGATCAGTGAGTGGAATTGAGCTGGACTCTCTGGAGGTGGTGACGGAGAAGTGGATGCTGTCCAAGTTGGTCAGCATCCTGAACAACATCCCCCATCCCTCCATGACATGCTGGTCGAGAAGAGGAGAGTCTTCAGCCAAAAATTCATACCCAGGAGGTCATTCCTGCTGGTGGccatcaaattttttttattctgctgGACCAACTGGTCATAGACTGCTGAGATCCTTACAGACTCACTAAGTGAATAGCATTTCTGCAACTCTGACATAGTGCtatctttttaaaatataattataataacttCCAATCTGCACACTGTATGAATGCACATGTTTATAGGACATACTTTTTTGATTGTGATTCCTTGCCCTATTCTGTcttcattgttttctttttgtctatATATCTGATGGTTTACTTCTGCTGGAGGTAGTAGCACCCCTACTACCTACTACCCTAAGCctgcctatttttttttaactcaagtaAACCGGCTGAGAATAAGGTTAACAAGATTAGtgattgtattttttgtttgtttgtttattttcttatGGTTTGATGGGTTTAAGGTCAGTTGTGTTTTGTTGACCTTGGCCCACCCTGGGTTCTGACTAGGATCCCCCCTGTGTTCCTGTGGGACTATAAATAAATCAGATTGTTACCACTG

Function

GO: NA

KEGG:

id description
K03098 APOD; apolipoprotein D and lipocalin family protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039789868.1 True 2361 mRNA 0.47 9 22679691 22688402
XM_039789869.1 False 2148 mRNA 0.47 8 22679691 22688399
XM_039789870.1 False 2221 mRNA 0.47 8 22679691 22688397
XM_039789871.1 False 2010 mRNA 0.47 7 22679691 22688396

Neighbor

gene id symbol gene type direction distance location
LOC120551932 klhl34 coding downstream 479645 22195236 ~ 22200046 (-)
tnk2a LOC103363574 coding downstream 688344 21953645 ~ 21991347 (-)
tmtopsb LOC100702425,LOC101487167,LOC102300731,LOC104945569,LOC102206266,LOC103366381 coding downstream 762036 21876164 ~ 21917655 (-)
LOC120552274 NA coding downstream 960186 21716547 ~ 21719505 (-)
LOC120552272 thnsl1 coding downstream 968075 21706905 ~ 21711616 (-)
ggh ggh,LOC100704938,LOC108234706,LOC101480685 coding upstream 2628 22691030 ~ 22696864 (-)
LOC120552530 LOC103365300 coding upstream 8625 22697027 ~ 22801749 (-)
LOC120552328 epc1,LOC102784371,LOC100694393 coding upstream 152625 22841027 ~ 22888231 (-)
LOC120552717 LOC104965202,LOC103365305 coding upstream 224160 22912562 ~ 22921256 (-)
LOC120552718 NA coding upstream 380318 23068720 ~ 23070897 (-)
G221857 NA non-coding downstream 339821 22337075 ~ 22339870 (-)
LOC120552529 NA non-coding downstream 344207 22325273 ~ 22335484 (-)
G221844 ptchd1 non-coding downstream 371457 22307488 ~ 22308234 (-)
G221843 ptchd1 non-coding downstream 378476 22300418 ~ 22301215 (-)
G221837 NA non-coding downstream 380116 22243807 ~ 22299575 (-)
G221926 NA non-coding upstream 270964 22959366 ~ 22960660 (-)
G221928 NA non-coding upstream 293562 22981964 ~ 22982351 (-)
G221933 NA non-coding upstream 351447 23039849 ~ 23040134 (-)
LOC120552653 NA non-coding upstream 382552 23070954 ~ 23071831 (-)
G221950 NA non-coding upstream 431376 23119778 ~ 23120288 (-)
smpx smpx other downstream 461310 22202767 ~ 22218381 (-)
LOC120552473 NA other downstream 559080 22114382 ~ 22120611 (-)
tfr1b NA other downstream 668605 21990017 ~ 22011086 (-)
rbis LOC101064519,LOC103367294,LOC102312013 other downstream 1458024 21217680 ~ 21221667 (-)
LOC120552536 fbxl7 other downstream 1817003 20835178 ~ 20862688 (-)
LOC120552322 cdh12,LOC108234660,LOC100695194,LOC101477368 other upstream 713141 23401543 ~ 23519526 (-)
avl9 avl9 other upstream 2108187 24796589 ~ 24854888 (-)
msl2b msl2,LOC102304425,LOC102778660 other upstream 2275015 24963417 ~ 24968106 (-)
LOC120552232 LOC103371349 other upstream 2347482 25035884 ~ 25086902 (-)
LOC120552299 NA other upstream 2868071 25556473 ~ 25562540 (-)

Expression


Co-expression Network