plcd1a


Basic Information

Item Value
gene id plcd1a
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 16601629 ~ 16621681 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039789926.1
GCCCCATGAGGTGGGGAACTATGTGCTTGTGGCTGCTTCTTCTCCTCCACATCGAGCCCACATTAAACATCGACTGGATGATGCAggttttaactttaaaaaagcAAGTTTTCCACTATGTATtgtgtaggcctacataaaCGCCCAGAAAGGACAACATCGGAGGAACAGGCTTTTCAGGAACATGTGAAAAAAGTTGCGCAAGAGAATGGAAAACTGCTAGGTTTGGAGGGAGATCCAGATTTACAGTTTCTGTTGGATGGCGGGGAGCTGGTCAAGGTTCGTAGGGGCAACTGGAAGAAGAGTCGCTTCTTCAAACTGCAGGAAGACTGCAAGACACTGTGGCAAGAGTCCCACAAATTAATCAAGCGAAACCAGACTTTCACCCTCGATGACATTGATTCAGTGCGCATGGGCCTTCAGTCGCAGGGGCATGATAAACACACAGACCCCAGTGTTGAAGAGCGGTGCTTCTCCATCATCTTCAAGGGCCGCAAGAAAACTCTCAACCTGATGGCGGCCAACGTGACAGAGGCAAAACAGTGGGTCAACGGCCTGGACAAGATCATCAGCAACATGCACAACCTCAGCCCCCAGCAGAATAGCGAGCATTGGATTTTCAACTGCATGCGAAAAGCAGACAAGAATAAGGACAACAAGATGAACCTAAAAGAGGTGAAGCACTTCCTGAAACAGCTCAACATTCAAGTGGACGACAATTATGCAGCAGACATTTTCAAGGAATGTGACACCTCAAATTCAGGCACCCTGGAGGGCTCAGAGATCAAGCTCTTCTATGACATGCTGACACACCGGGAGGAGATAGATGTGATTTATGGGAATTACGCTCAAACAGAGGGTCAGATGAGCGCCACAGACCTGCTGAACTTCCTGTTGAAGGAGCAGAGGGAGCAGGCATCCATGGAGGACGCTGTCAAGCTGATTGAAAAATATGAGGTGGATGGGACAGCAAAGCAGAATAAGCGCATGACCAAAGATGGCTTCCTGATGTACACGCACCAGGAGGACGGCTCCATCCTCAACCCGGCCCACAAACCTGTGTATCAGGACATGCACCAGCCCCTCAACCATTACTTCATCTCCTCGTCACACAACACATACCTGATGGAAGACCAACTCAAAGGACCCAGCAGCACAGAAGCCTACATAAAAGCACTGATGAAGAGCTGTCGCTGTGTGGAGCTGGACTGTTGGGACGGGGCTAACGGTGAGCCTGTCATTTACCACGGCCACACACTCACATCCAAAGTGCTCTTCAAAGACGTCATCAAAGCCATCAAAGAATACGCCTTCAAAACATCAGTGTACCCAGTGATCCTGTCCCTGGAGAACCACTGCACCATAGAGCAACAAAAGCTCATGGCCCATTACTTAAAGTCCATCCTGGGTGATGCTTTGGTCACAAAGCCTCTGGGCAACACCATGCCCACACACTTCCCCTCACCTGAGGAGCTGAAGGGGAGGTTCCTCGTCAAGGGAAAGCGATTGAACAAACTGAATGCTGCCGTCAACAATCAAAGCACCGTAGAGGAAGGCACTGTGTCTGATGAGGATGAGGCTGCAGAATGTAAGCAGAACAGCACAAAAGGCCAAACAAAGAAATCCACAATCAAACTTGCCAAAGAGCTCTCTGACACCGTCGTCTACTGCAAAAGCGTCCATTTTAATGGCTTTGAACACTCCAAGGAGAGCCACGCCTTCTATGAGATGTCGTCCTTCAAGGAGAGTAAGGCTTTGCACCTGGCTGAGACTTCAGCTACTGCCTTCATCCATCACAATATGGACAAACTCAGTAGGATCTACCCTGCTGGCTCCAGAACTGACTCCTCCAACTATAACCCAGTGCCCCTGTGGAACGTTGGCTGCCAGATAGtggCATTGAACTTTCAGACTCCCCACAAGGAAATGCACATAAACCAGGGTCGGTTTCTGCCAAACGGTTTTTGTGGCTACATCCTGAAACCTGAATTTCAGAGAGACATGTCCTCTCAGTTTAATCCCAGAACACTTATTGAAGGGCCCTGGCTAAATAAGAAGACCTTTCATGTCATGGTGATCTCAGCTCAGCAGTTACCTAAACTCAACAAGGGCAAACACAACTCCATCGTTGACCCTCTGGTGAAAGTGGAGATCTATGGCGTCCCAGCAGACAACGCCAGCAAGGAGACACACTACATTAATAACAATGGGTTTAACCCAACGTGGAACGAGAAATTCACATTTGACATCAACGTCCCAGAGCTGGCCATGCTGCGGTTTTTGGTGGAGGACCATGACGCAGCATCTGCTAATGATTTCATCGGGCAGTACTGTCTACCGCTCACCAGTATACAGAACGGCTATCGCCACGTGCCGCTGCTCACCAAGAGAGGGGCCGTCATCTGCTCAGCCGGACTCTTTGTGCATCTCATGCTCGTGGACGTAGAGTAAGCTCGCCTTTGGAAAAGCCTTCACGCCAgcaacatcatttattttttaaaactctAAAGGAATTTATCGAGTTTGAAAGCTTAATTTACCTCTGATCAAATATTTaatggagagaggaaaaaagaacgTCTGTCATCTGGTGGTGCTGACTCACCGTTGTCTGCCTAACACTTTCCTGTCATTGTATCATTTTAGCTTTCTTCAAATAAAGTTGAGTGTGAGCTCC
>XM_039789927.1
tttGGATCTCTCCTGAAAGACAAACAGACTAGTTTTATGGCTGTGATAACTCCTATACTGTAATATATCCGACACTACTCTAAAACAGAAGAGGACTTTAGCCCAACGTATGGTGATTTATTTTGACTGGAACCAGAATGGACATAAATGGCACACCTGGGAAATATGGTTTGGAGGGAGATCCAGATTTACAGTTTCTGTTGGATGGCGGGGAGCTGGTCAAGGTTCGTAGGGGCAACTGGAAGAAGAGTCGCTTCTTCAAACTGCAGGAAGACTGCAAGACACTGTGGCAAGAGTCCCACAAATTAATCAAGCGAAACCAGACTTTCACCCTCGATGACATTGATTCAGTGCGCATGGGCCTTCAGTCGCAGGGGCATGATAAACACACAGACCCCAGTGTTGAAGAGCGGTGCTTCTCCATCATCTTCAAGGGCCGCAAGAAAACTCTCAACCTGATGGCGGCCAACGTGACAGAGGCAAAACAGTGGGTCAACGGCCTGGACAAGATCATCAGCAACATGCACAACCTCAGCCCCCAGCAGAATAGCGAGCATTGGATTTTCAACTGCATGCGAAAAGCAGACAAGAATAAGGACAACAAGATGAACCTAAAAGAGGTGAAGCACTTCCTGAAACAGCTCAACATTCAAGTGGACGACAATTATGCAGCAGACATTTTCAAGGAATGTGACACCTCAAATTCAGGCACCCTGGAGGGCTCAGAGATCAAGCTCTTCTATGACATGCTGACACACCGGGAGGAGATAGATGTGATTTATGGGAATTACGCTCAAACAGAGGGTCAGATGAGCGCCACAGACCTGCTGAACTTCCTGTTGAAGGAGCAGAGGGAGCAGGCATCCATGGAGGACGCTGTCAAGCTGATTGAAAAATATGAGGTGGATGGGACAGCAAAGCAGAATAAGCGCATGACCAAAGATGGCTTCCTGATGTACACGCACCAGGAGGACGGCTCCATCCTCAACCCGGCCCACAAACCTGTGTATCAGGACATGCACCAGCCCCTCAACCATTACTTCATCTCCTCGTCACACAACACATACCTGATGGAAGACCAACTCAAAGGACCCAGCAGCACAGAAGCCTACATAAAAGCACTGATGAAGAGCTGTCGCTGTGTGGAGCTGGACTGTTGGGACGGGGCTAACGGTGAGCCTGTCATTTACCACGGCCACACACTCACATCCAAAGTGCTCTTCAAAGACGTCATCAAAGCCATCAAAGAATACGCCTTCAAAACATCAGTGTACCCAGTGATCCTGTCCCTGGAGAACCACTGCACCATAGAGCAACAAAAGCTCATGGCCCATTACTTAAAGTCCATCCTGGGTGATGCTTTGGTCACAAAGCCTCTGGGCAACACCATGCCCACACACTTCCCCTCACCTGAGGAGCTGAAGGGGAGGTTCCTCGTCAAGGGAAAGCGATTGAACAAACTGAATGCTGCCGTCAACAATCAAAGCACCGTAGAGGAAGGCACTGTGTCTGATGAGGATGAGGCTGCAGAATGTAAGCAGAACAGCACAAAAGGCCAAACAAAGAAATCCACAATCAAACTTGCCAAAGAGCTCTCTGACACCGTCGTCTACTGCAAAAGCGTCCATTTTAATGGCTTTGAACACTCCAAGGAGAGCCACGCCTTCTATGAGATGTCGTCCTTCAAGGAGAGTAAGGCTTTGCACCTGGCTGAGACTTCAGCTACTGCCTTCATCCATCACAATATGGACAAACTCAGTAGGATCTACCCTGCTGGCTCCAGAACTGACTCCTCCAACTATAACCCAGTGCCCCTGTGGAACGTTGGCTGCCAGATAGtggCATTGAACTTTCAGACTCCCCACAAGGAAATGCACATAAACCAGGGTCGGTTTCTGCCAAACGGTTTTTGTGGCTACATCCTGAAACCTGAATTTCAGAGAGACATGTCCTCTCAGTTTAATCCCAGAACACTTATTGAAGGGCCCTGGCTAAATAAGAAGACCTTTCATGTCATGGTGATCTCAGCTCAGCAGTTACCTAAACTCAACAAGGGCAAACACAACTCCATCGTTGACCCTCTGGTGAAAGTGGAGATCTATGGCGTCCCAGCAGACAACGCCAGCAAGGAGACACACTACATTAATAACAATGGGTTTAACCCAACGTGGAACGAGAAATTCACATTTGACATCAACGTCCCAGAGCTGGCCATGCTGCGGTTTTTGGTGGAGGACCATGACGCAGCATCTGCTAATGATTTCATCGGGCAGTACTGTCTACCGCTCACCAGTATACAGAACGGCTATCGCCACGTGCCGCTGCTCACCAAGAGAGGGGCCGTCATCTGCTCAGCCGGACTCTTTGTGCATCTCATGCTCGTGGACGTAGAGTAAGCTCGCCTTTGGAAAAGCCTTCACGCCAgcaacatcatttattttttaaaactctAAAGGAATTTATCGAGTTTGAAAGCTTAATTTACCTCTGATCAAATATTTaatggagagaggaaaaaagaacgTCTGTCATCTGGTGGTGCTGACTCACCGTTGTCTGCCTAACACTTTCCTGTCATTGTATCATTTTAGCTTTCTTCAAATAAAGTTGAGTGTGAGCTCC

Function

NR:

description
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1-like

GO:

id name namespace
GO:0006629 lipid metabolic process biological_process
GO:0035556 intracellular signal transduction biological_process
GO:0005509 calcium ion binding molecular_function
GO:0004871 obsolete signal transducer activity molecular_function
GO:0004435 phosphatidylinositol phospholipase C activity molecular_function

KEGG:

id description
K05857 PLCD; phosphatidylinositol phospholipase C, delta

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039789926.1 True 2677 mRNA 0.48 15 16601629 16618914
XM_039789927.1 False 2622 mRNA 0.48 15 16601629 16621681

Neighbor

gene id symbol gene type direction distance location
LOC120551893 LOC103377216,LOC107591252,LOC101472906,LOC100709944 coding downstream 66831 16527664 ~ 16534798 (-)
hhatlb hhatl coding downstream 74579 16519042 ~ 16527050 (-)
klhl40b klhl40 coding downstream 83691 16514192 ~ 16517938 (-)
sec22c sec22c coding downstream 137613 16458333 ~ 16464016 (-)
kpna1 kpna1 coding downstream 255557 16339112 ~ 16346072 (-)
LOC120552381 LOC104957866 coding upstream 257814 16879495 ~ 16881724 (-)
bdh1 bdh1,LOC103373205,LOC107382809 coding upstream 328974 16950655 ~ 16965739 (-)
gyg1b gyg1 coding upstream 344964 16966645 ~ 16977681 (-)
cpb1 cpb1 coding upstream 358243 16979924 ~ 16987685 (-)
agtr1b agtr1 coding upstream 366128 16987809 ~ 16994577 (-)
G220300 gars,LOC103369121 non-coding downstream 52905 16546928 ~ 16548724 (-)
G220273 NA non-coding downstream 120471 16479383 ~ 16481158 (-)
G220272 nktr,LOC102798446 non-coding downstream 124114 16472248 ~ 16477515 (-)
G220257 NA non-coding downstream 151408 16447930 ~ 16450221 (-)
G220254 NA non-coding downstream 235016 16365204 ~ 16366613 (-)
G220373 NA non-coding upstream 72906 16694587 ~ 16701557 (-)
G220382 NA non-coding upstream 120606 16742287 ~ 16745412 (-)
G220443 NA non-coding upstream 265575 16887256 ~ 16888024 (-)
G220445 NA non-coding upstream 276508 16898189 ~ 16898537 (-)
LOC120551964 NA non-coding upstream 493549 17115230 ~ 17398235 (-)
drd3 drd3 other downstream 316894 16266303 ~ 16284735 (-)
G220124 NA other downstream 536408 16064670 ~ 16065221 (-)
G220117 usp12,LOC107701680,LOC107705210 other downstream 596865 16003879 ~ 16004764 (-)
si:ch211-140b10.6 polr1d other downstream 627966 15968731 ~ 15973663 (-)
mtfr1 NA other downstream 920741 15676254 ~ 15680888 (-)
LOC120552205 LOC100711537,LOC102295084,LOC108230444,LOC106948898,LOC103140410 other upstream 160391 16782072 ~ 16795124 (-)
G220412 csrnp1,LOC104937158,LOC102793366 other upstream 252968 16874649 ~ 16875300 (-)
si:ch73-174h16.4 LOC103364270,LOC104947970 other upstream 1805081 18426762 ~ 18483776 (-)
G220833 NA other upstream 1988555 18610236 ~ 18697970 (-)
LOC120552352 colec12,LOC102798044 other upstream 2151296 18772977 ~ 18810944 (-)

Expression


Co-expression Network