plag1 (plag1,LOC102799649)


Basic Information

Item Value
gene id plag1
gene name plag1,LOC102799649
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 3669151 ~ 3692608 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039789980.1
TGCTCGAAAGAGGGGAAAGCAAACAATTTTCAGGCCCGCCGCGTCTAGCAAaaaatatgagaaaaaaattattaaaaattcGGAAAATAGttgaaagtgaagaaaaaccCGACAGAAAGGATGTTAAAGCGACCGGGgcCCCTGAGTCCGGGCGGTGTTGAGCACATAAAACTGGATAGAACAATTGCATCAGTACTAGTTGGGCACTGCGCCCCTGTCCATGTAGCTGCTCAGCCCTAGAGTGCCATGGCCACGGGAACCCAGGGCCACCGCGACCACCTCCTGGAGAGAACCAAGCTCGCGCCGCCCGCCGGGAGGCGCAGGAGAGCCGAGGGGAAGCCCAAGAAGAATTTCTCTTGCCAGGAGTGTCAGAAGGCTTTCAACAGTCTGGAGAAGTTGAAGGTGCACTCGTACtctcacacaggagaaagacCGTACCGCTGCTCCCACCCCGACTGCACCAAGGCTTTCGTCTCCAAATACAAGCTGCTACGGCATATGGCGACTCACTCGCCAGAAAAAAACCACAAGTGTTCATACTGTGAGAAAATGTTCCACCGCAAGGATCACTTAAAGAATCACCTGCACACTCACGACCCCTACAAGGAGGCGTTCACTTGCCAGGAGTGCGGCAAGAGCTACAACACCAAGCTGGGCTTCAAGCGCCACCTGGCCCTCCACGCCGCCAACAGCGGAGACCTCACCTGCCAAGTGTGCCTGCAGCCGTTCCCCAGCACCGGGGTCCTTCTGGAGCACCTCAAAACGCACGCTGGCAAGTCCTCCGGCGGGACCAAAGAGAAGAAGCACCGCTGCGAGCATTGCGAGCGGCGATTTTACACCCGTAAAGATGTGCGGCGCCACATGGTGGTGCACACTGGACGCAAGGACTTCCTCTGTCAGTACTGCGCCCAGCGCTTCGGCAGGAAGGACCACCTGACGCGTCACGTGAAGAAGAGCCACGCTCGGGAGCTGCTAAGGGTCAAAACTGAGCCAGCTGATTCGCTGGAGCCCGTTGTCTACGATATGGCGTCCGGGGGCATCAAGGACGAGCTCCCGGGAATGGTGACGCCGAGGCCGCACCAGCTCAACATGTACGCGGGCCCCGTCCTGGACACAGAGCCCttccccacccccacacactcGTTTTCTTTTAAGTACCCACTGGGCTCCAACTTTACCTCATACAGCGTCTCACAGGAGCGGGAGCAGAATCTAAAGGGAGAACTGGAGACCTACCTGATGGAGCTGCAGAGCAGCATGCCCTCCTCATCCTCTGCAGCCCAGGAACCCCAACTCTCCTCCTCCAAACTGGAGCTGGAGCCTCAAGTGGGCGTGCTGGAGGACGTGAGCGAGGGCGTGTCCCTGTCCAAAATGGCCACCCCGATGGCGGCAGCCGCCGCCGCAGGCGACTCTCTGGCCTCATCCTCCTCCCTGATGGACTTCTCGCAGCTTTTTAACTTCCTGCCACTCAACGGGCCCCCGTACAGCCAGGCAGGGGGCGGCAGCGTGGGGCAGGGCGTGGCCTATCCACCCAACGAAGAGCCGGCACCTCTGGGCCAGCTTCCCCCCCAGCCCCCCGAAGGCCCGGAGGCTGCAGAGAGTCCGCTTCAGAGGCTGCCCTCCTCCTTCATATCCAACCTGAGCACACCCACTACACTGCCCCGCTTCCACCAAGCTTTTCAGTGATCCAGTATGTGCTGGgcctgacgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacgtcaagcTACACAACCACCCCCTCAGACAATGAAAAAAGATGCTACACGTGTTTGAAGATATTAGCACTTCTATCCATTTCATATgacaacacataaacacacagcgATCAGCACTGAaagaaggcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacgctttctAATGGCTACTGTTGGGATGTCTTCTTTTCACCTATGAAGCTTTTTATTGACGAGTTGGCAACTTTtttaccccccctcccccttccctaATGACGTGTTCACATAATAGCAGAAAAAACTGATCCTCTTGTGCTGTGTGGATGTGCAAACACAATATCCAAATTCTTGCTATTTGCAAGTTTTACAACCTAACATCATCTGTTGTGATGACCGACAGAAAGAACTATTTCCAAGGCCTGCCGGCTACAATAAACCTCTTGAATCGTAGCACGAGTATGGAGAATTCAGCCATGGTTGTGGCTGTGCTCACAAAGCTCAGCACGCCACGAACACTTTAATGGAGCAAAACCTGTTTTTCAGCCATGATGTGAACATGCCTTTGCTGTGTCAGGTTCAACATGATTAAGTCTTTTGGGGGTTGGAGAATTTTCACGTAGATAATATTCAATATTCATTTGATTGCagtgacattttcttttctttacttaACCC

Function

symbol description
plag1 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to act upstream of or within transcription, DNA-templated. Predicted to be located in nucleus. Is expressed in several structures, including axial vasculature; head; head mesenchyme; immature eye; and ventricular zone. Human ortholog(s) of this gene implicated in Silver-Russell syndrome and pleomorphic adenoma. Orthologous to human PLAG1 (PLAG1 zinc finger).

NR:

description
zinc finger protein PLAG1

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG:

id description
K19484 PLAG1; zinc finger protein PLAG1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039789980.1 True 2545 mRNA 0.54 3 3669151 3692608

Neighbor

gene id symbol gene type direction distance location
mos mos coding downstream 24601 3642390 ~ 3644550 (-)
trnar-ucu_66 NA coding downstream 46530 3622524 ~ 3622621 (-)
trnar-ucu_65 NA coding downstream 47544 3621510 ~ 3621607 (-)
trnar-ucu_64 NA coding downstream 47916 3621138 ~ 3621235 (-)
trnar-ucu_63 NA coding downstream 48217 3620837 ~ 3620934 (-)
LOC120552547 LOC104953016,LOC108234711 coding upstream 196010 3888618 ~ 3901023 (-)
LOC120552072 LOC101479525,LOC102293327 coding upstream 315291 4007899 ~ 4050666 (-)
cubn cubn coding upstream 374186 4066794 ~ 4160555 (-)
LOC120552076 NA coding upstream 473469 4166077 ~ 4176543 (-)
neurod6a LOC107736131 coding upstream 501237 4193845 ~ 4197469 (-)
G217778 NA non-coding downstream 2235 3666645 ~ 3666916 (-)
G217770 NA non-coding downstream 5273 3660520 ~ 3663878 (-)
G217771 NA non-coding downstream 9362 3658716 ~ 3659789 (-)
G217758 steap2 non-coding downstream 29213 3637495 ~ 3639938 (-)
G217746 NA non-coding downstream 120718 3545453 ~ 3548433 (-)
G217799 NA non-coding upstream 33916 3726524 ~ 3726836 (-)
G217815 NA non-coding upstream 133946 3826554 ~ 3827053 (-)
G217817 NA non-coding upstream 151535 3844143 ~ 3844482 (-)
G217818 NA non-coding upstream 179125 3871733 ~ 3873634 (-)
G217828 NA non-coding upstream 211499 3904107 ~ 3904552 (-)
f3a NA other downstream 213107 3437802 ~ 3456044 (-)
LOC120552696 NA other downstream 325446 3315418 ~ 3343705 (-)
svila svil other downstream 532937 2988926 ~ 3136214 (-)
scospondin sspo,LOC104950179 other downstream 1250086 2214711 ~ 2419065 (-)
LOC120552169 LOC102294047,LOC102205018 other downstream 1858021 1658172 ~ 1811130 (-)
G217780 chchd7,LOC102799933 other upstream 344 3692952 ~ 3704357 (-)
G217837 NA other upstream 243402 3936010 ~ 3941329 (-)
G218019 NA other upstream 1334897 5027505 ~ 5036704 (-)
G218085 LOC107687935 other upstream 2007621 5700229 ~ 5700576 (-)
G218453 adarb2 other upstream 4502321 8194929 ~ 8195879 (-)

Expression


Co-expression Network