LOC120552222 (tmem241,LOC102778472)


Basic Information

Item Value
gene id LOC120552222
gene name tmem241,LOC102778472
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 9805505 ~ 9813890 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790058.1
TCTTGACGTGTCACCACGGACAGGCAGTGAGGGAAGTTTCCGATCTTGAAATGTCTTTAGTTTGAAACAGGCGACATGTATTACATTTAGTATTATTTTGTGGTTAGAAATCATGTCCCTGCTGAAGTGTGTCGGCGGGTCAACATGCAGTGGAAAAGACACATCACTGGTCTCGCTTTTAGCATCGTTTTCGTTGTATCATATTTCACGAATAAGtttgtcctGTCAGTGTTAAAATTCACCTATCCAACCTTATTTCAAGGATGGCAAACATTTATCGGGGCTGTCCTGCTTCTACTCTCTGGGAAGTTTGGATGGGTGGAAATGAGCCGCATCACCAGATCAGCAGCTCTTTCCTGGCTTCCAGGCTCCCTCCTGTTTGTGGGAAACATATATGCGGGTTCCAGGGCTTTATCACGCATAGACATTCCTATTTTCTTCACTCTTCAGAATTCCTCCCATGTTGTTAGTTACATAATCTTGAAGGTTTTCCATAGAGAGAAGACACAATGGCTGAAATTAATCAGCATATGCTTAATGCTGCTCTCAGCTATCAACCTCCCCCTCCATGATCCTCAGTTTGACTACAGTGGTTACCTCTGGGCTGTTGGTCATCTGCTCTGTGTTGGTGCATACAGAGTGTTTCAAGTTCACTACAAATCAAGTAATTTGAGTGACCTTGAACAACAGTGCATCAACTACCTGTTCAGTGTACTTCTGCTGGCCATTGCCGCTCATCCAACAGGCGACCTCACGGGTGCCATGGAGTTCCCCTCCCTTCAGTCCCACACATTTCACTGTGGTTGCTGTGCCAGTGCACTGCTGGGTTTTTTGTTGCTGCTGGCCACAGTCAAGCTAAAAAGTGGATTGTCCCTCGAGCACTTTAGGGTCTGGATTTTTTTGTCTAAGATTACTGCCATGTCCCTCTCTCCGTTTATTTTCTACATGGACATTAATACTCCATCTCTTATTTGTGTTGTCATTAGTCATGTTGGAGAGGccctgctgatgtattctcagAGAGACTCTCAGTTGTGATGAGGAAATTGCAGCTCTCCGGATTGACCCACAACTAGCAGTccaaaaagagattttttttttttttctagaaaaatattttatttttgtaatttctcATCTATGCGCTGACAATCTGCTGACCAAATAAAATTATCTTTGTGTACA
>XM_039790059.1
TCTTTGTCTCACGTCTTGACGTGTCACCACGGACAGGCAGTGAGGGAAGTTTCCGATCTTGAAATGTCTTTAGTTTGAAACAGGCGACATGTATTACATTTAGTATTATTTTGTGGTTAGAAATCATGTCCCTGCTGAAGTGTGTCGGCGGGTCAACATGCAGTGGAAAAGACACATCACTGGTCTCGCTTTTAGCATCGTTTTCGTTGTATCATATTTCACGAATAAGATGGCAAACATTTATCGGGGCTGTCCTGCTTCTACTCTCTGGGAAGTTTGGATGGGTGGAAATGAGCCGCATCACCAGATCAGCAGCTCTTTCCTGGCTTCCAGGCTCCCTCCTGTTTGTGGGAAACATATATGCGGGTTCCAGGGCTTTATCACGCATAGACATTCCTATTTTCTTCACTCTTCAGAATTCCTCCCATGTTGTTAGTTACATAATCTTGAAGGTTTTCCATAGAGAGAAGACACAATGGCTGAAATTAATCAGCATATGCTTAATGCTGCTCTCAGCTATCAACCTCCCCCTCCATGATCCTCAGTTTGACTACAGTGGTTACCTCTGGGCTGTTGGTCATCTGCTCTGTGTTGGTGCATACAGAGTGTTTCAAGTTCACTACAAATCAAGTAATTTGAGTGACCTTGAACAACAGTGCATCAACTACCTGTTCAGTGTACTTCTGCTGGCCATTGCCGCTCATCCAACAGGCGACCTCACGGGTGCCATGGAGTTCCCCTCCCTTCAGTCCCACACATTTCACTGTGGTTGCTGTGCCAGTGCACTGCTGGGTTTTTTGTTGCTGCTGGCCACAGTCAAGCTAAAAAGTGGATTGTCCCTCGAGCACTTTAGGGTCTGGATTTTTTTGTCTAAGATTACTGCCATGTCCCTCTCTCCGTTTATTTTCTACATGGACATTAATACTCCATCTCTTATTTGTGTTGTCATTAGTCATGTTGGAGAGGccctgctgatgtattctcagAGAGACTCTCAGTTGTGATGAGGAAATTGCAGCTCTCCGGATTGACCCACAACTAGCAGTccaaaaagagattttttttttttttctagaaaaatattttatttttgtaatttctcATCTATGCGCTGACAATCTGCTGACCAAATAAAATTATCTTTGTGTACA
>XM_039790060.1
GTCTTGACGTGTCACCACGGACAGGCAGTGAGGGAAGTTTCCGATCTTGAAATGTCTTTAGTTTGAAACAGGCGACATGTATTACATTTAGTATTATTTTGTGGTTAGAAATCATGTCCCTGCTGAAGTGTGTCGGCGGGTCAACATGCAGTGGAAAAGACACATCACTGGTCTCGCTTTTAGCATCGTTTTCGTTGTATCATATTTCACGAATAAGtttgtcctGTCAGTGTTAAAATTCACCTATCCAACCTTATTTCAAGGATGGCAAACATTTATCGGGGCTGTCCTGCTTCTACTCTCTGGGAAGTTTGGATGGGTGGAAATGAGCCGCATCACCAGATCAGCAGCTCTTTCCTGGCTTCCAGGCTCCCTCCTGTTTGTGGGAAACATATATGCGGGTTCCAGGGCTTTATCACGCATAGACATTCCTATTTTCTTCACTCTTCAGAATTCCTCCCATGTTGTTAGTTACATAATCTTGAAGGTTTTCCATAGAGAGAAGACACAATGGCTGAAATTAATCAGCATATGCTTAATGCTGCTCTCAGCTATCAACCTCCCCCTCCATGATCCTCAGTTTGACTACAGTGGTTACCTCTGGGCTGTTGGTCATCTGCTCTGTGTTGGTGCATACAGAGTGTTTCAAGTTCACTACAAATCAAGTAATTTGAGTGACCTTGAACAACAGTGCATCAACTACCTGTTCAGTGTACTTCTGCTGGCCATTGCCGCTCATCCAACAGGCGACCTCACGGGTGCCATGGAGTTCCCCTCCCTTCAGTCCCACACATTTCACTGTGGTTGCTGTGCCAGTGCACTGCTGGGTTTTTTGTTGCTGCTGGCCACAGTCAAGCTAAAAAGTGGATTGTCCCTCGAGCACTTTAGGGTCTGGATTTTTTTGTCTAAGTCATGTTGGAGAGGccctgctgatgtattctcagAGAGACTCTCAGTTGTGATGAGGAAATTGCAGCTCTCCGGATTGACCCACAACTAGCAGTccaaaaagagattttttttttttttctagaaaaatattttatttttgtaatttctcATCTATGCGCTGACAATCTGCTGACCAAATAAAATTATCTTTGTGTACA

Function

symbol description
tmem241 Predicted to enable antiporter activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus.

NR:

description
PREDICTED: transmembrane protein 241 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790058.1 True 1185 mRNA 0.43 15 9805505 9813877
XM_039790059.1 False 1151 mRNA 0.44 14 9805505 9813890
XM_039790060.1 False 1109 mRNA 0.44 14 9805505 9813878

Neighbor

gene id symbol gene type direction distance location
fbxo45 fbxo45,LOC103356146 coding downstream 15338 9786179 ~ 9790167 (-)
nrros NA coding downstream 27789 9767592 ~ 9777716 (-)
LOC120552183 vav3,LOC102780841 coding downstream 79432 9614840 ~ 9726073 (-)
col11a1a col11a1,LOC103148006 coding downstream 632481 9087151 ~ 9173024 (-)
olfm3a olfm3,LOC103369880,LOC108250954 coding downstream 722397 9029123 ~ 9083108 (-)
LOC120552683 LOC108245435,LOC103482304,LOC102203196,LOC101072926,LOC102289936,LOC101468359 coding upstream 35329 9849219 ~ 9856898 (-)
LOC120552479 mmp16,LOC103363253 coding upstream 205438 10019328 ~ 10111393 (-)
LOC120551894 pomp coding upstream 415327 10229217 ~ 10232319 (-)
LOC120552310 ramp3,LOC104918156,LOC101488002,LOC102215016,LOC100706976 coding upstream 530445 10344335 ~ 10399252 (-)
LOC120552427 LOC104941941,LOC106963427 coding upstream 604053 10417943 ~ 10433475 (-)
G218745 prmt6 non-coding downstream 342463 9460354 ~ 9463042 (-)
LOC120551892 NA non-coding downstream 390054 9414966 ~ 9415451 (-)
G218739 NA non-coding downstream 430293 9374859 ~ 9375212 (-)
G218735 NA non-coding downstream 508267 9297037 ~ 9297238 (-)
LOC120552334 NA non-coding downstream 620136 9174102 ~ 9185369 (-)
G218807 NA non-coding upstream 133397 9947287 ~ 9947510 (-)
G218811 NA non-coding upstream 200859 10014749 ~ 10078804 (-)
G218822 NA non-coding upstream 399455 10213345 ~ 10213608 (-)
G218830 NA non-coding upstream 489312 10303202 ~ 10303405 (-)
G218872 ngdn non-coding upstream 658233 10472123 ~ 10473613 (-)
LOC120551928 LOC104943218,LOC103369878,LOC100710535,LOC102301415,LOC101469805 other downstream 834867 8957409 ~ 8970638 (-)
prkdc prkdc other downstream 953779 8797781 ~ 8851726 (-)
G218471 NA other downstream 1374575 8430464 ~ 8430930 (-)
G218453 adarb2 other downstream 1609626 8194929 ~ 8195879 (-)
G218085 LOC107687935 other downstream 4104929 5700229 ~ 5700576 (-)
cngb3.1 LOC103363254,LOC102786718,LOC108428960,LOC104948783 other upstream 19572 9833462 ~ 9848241 (-)
G218950 NA other upstream 763509 10577399 ~ 10669527 (-)
LOC120552013 NA other upstream 790430 10604320 ~ 10615221 (-)
bloc1s5 bloc1s5 other upstream 1050395 10864285 ~ 10868787 (-)
pign pign,LOC104945957,LOC102796964 other upstream 2603458 12417348 ~ 12433035 (-)

Expression


Co-expression Network