gfod1 (gfod1,LOC100711398,LOC102233768,LOC102788772)


Basic Information

Item Value
gene id gfod1
gene name gfod1,LOC100711398,LOC102233768,LOC102788772
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 2567665 ~ 2615901 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790086.1
ATGCTTCCAGGGGTCGGCGTGTTCGGCACCAGCCTGACCACCAGGGTGATCATCCCGCTGCTGAAGAACGAGGGCTTCGCCGTCAAAGCGCTGTGGGGCCGGACCcaggaggaggcggaggagcTGGCCAAGGAGATGAACGTCCCGTTTTACACCAACCGGATCGACGATGTGCTGCTGCACCAGGATGTGGATCTGGTCTGCATCAACCTGCCGCCGCCTCTGACGCGGCAGATCGCAGTCAAAACGCTGGGTATTGGAAAGAACGTCATCTGCGACCGGACAGCAACGCCTCTGGATGCCTTCCGAATGATGTCAGCGGCCCAGTACTACCCCAAGTTGCTgagcattatgggaaatgtgttACGTTTCTTGCCTGCCTTCGTGCGAATGAAGGAGCTGGTAGAGGAGGGGTACATCGGGGAGCTTCTGGTCTGTGAGGCCCAGGTCCACAGCGGTAGTCTCTTGGGGAAAAAATACAACTGGAGCTGCGATGACCTGATGGGAGGCGGTGGTCTGCATTCGGTGGGCAGTTACATCATCGACTTGCTCACGTTTCTGACCGGTCAGCGTGCATTAAAAGTGCACGGCTTCCTCAAGACCTTTGTCAAACAAACGGATCACATTCGGGGCATCCGTCAGATCACCAGTGATGACTTCTGCACGTTCCAGATGGCACTGGAGGGGGGCGCCTGCTGCACCGTCACGCTCAACTTCAACGTTCCCGGAGAGTTTCGGCAGGAGGTGATCGTCGTGGGGACCGTAGGGAGGTTAACGGTCACAGGGACCGACCTGTACGGACAGAAAAACAACGGGGGCGGAGGAAGCAGCGGAGGACCTGAGCTCCTGCTCAAAGACACCACACCTCTTGAGAAGAGTTCCTTACCGGAGAAGGCTTTCAGTGACATTCCATCCCCGTATCTCACAGGAACGATCCGCATGATCCAGGCGGTGCGGCAGGCCTTTCAGGACCAGGACGACAGGAGGACGTGGGACGGGAGACCTCTGACAATGGCCGCTACCTTTGAGGATTGTCTCTATGCTCTTTGCGTGGTGGATACCATCAAGAAATCCAACCAGAGCGGAGAGTGGCAGAACATTGTGGTGATGACCGAGGAACCGGAGATCAGCCCAGCCTATTTGATCAGCGAGGCCATGCGGCGGAGTAGGATGTCACTCTACTGTTAGCATCAGCTGATGTGCTGACCCCTTAAAAAATGGCTTTACTGGAGGTGGCACCGGAAAAGGCCTCAGTGTTGTAGAAACGTTATTCATACAGCTTCTGGGTTCAGCTCTTTAATTCAATACCTGTTTATTTAAACACTGTCAAAAAGCTATATTGCTACTGTTACAGAAAGAGAGGCTATGCCACTATGATACAGAGAGTTTTGGTTTCCTGAAACCCTGCCTCAGTAGTAGAGAAAAAGCAATGTGACCAATAatcaaacctttatttataagGAAGCCTTTCCTGTTTTTACCCGTTTGACAGAAGACTGTAACGGGGTGATGCACTTGTAAATCAAGCCGATTCATACAACCGAAAGATATAGTTCTACAGTGGAGGCAGATCAGGGAATAATAACTAATGCTACTGCGTTCGGCTTGACCATAAGGGTATTGCGCCTCTCATCTCTGCTTCTGCTTCTCTTCTATTTGACTGGGTCTGGAAGACAACACCTTACACTGTGGGTCCAAACGAGGACAGCCAAGGAAGAACGATAGTCCTCTCAGTTGAAACTGTGCCGCTGTATTGTTGCTGTAGTCCGAAGTACTTGCTAGTTTTACAGCAAATCAGTATGCTTGATAGCTTcagtctctgtctgctctgtatgcttcctctgtgtgtgtgagaaacaagagagaaaagaaatcaATAGTTTGGCTGCTGGGGTTTTCAGAAGGGTTTACCTTCTGGTTTATGTATGCAATATATCCAGGCTGTAGTCTGCAGCAGAAACACTTTAATCTTCCAGCTTGGAGTTAAGGGTTAAAAGACACTATGGTATGCCTTTATGCAATTACAGTAGCCTGTGTATCCGTTTGCGAGTCCTGTACAAGTGGCCAGTGCAGTGATACTTTGATGTTCTTCTTATTTCTCTCACGAGTGCAGTGTCCGTTCgaaacgggccgattgcttggccccCGGAAGTCCTGCTTGCAGCTATCTCAAGAACTACTCATCCGATCACCTTCACTCTCGACACGGCGCTTCCTTGGATCCTCAGCAATACAGCTGCCAAGTGTTAAGTTGATTGGATGAACAGTTTTTGAGATAAATGGACAGTCataaatgcatacatacaaaGATAGAGATTCATTCCTTTATAGTTAGTTAGATGGTGCTGCTACAGCGCCACCTATTGTCCAAATGGCACCAGATTTGTCATGGCCATTCAGATATCCTATCTACACACGTCCACCAAATGTGGTGGCAATAGCACAGAGCGTTCAGGAGATATGACATTTTCTTGCCCACTGCATTTGAGTAAATGTTGAGGGCCTGCTATAGCAAAACTGTATATCACAAACCTGAAAAAGTACCTTTTTTGACTTGGTCCAGAGATGTTCTGTAGCACATTTGGTGATGATTGCTAAAACTTTGTAGGAGGAGtagagaaacaaaaacagatttggacacaattcaaaatggcggcaAAATCCTACAGAATCCAGGGAAAGAATAATTTTGCTTCTGCTTGCTTCAAATGTTATAGGCCAAAACTTTAAGTTTTTTGTTATAGCATTTCCAAATTGCACCACATTCAACACTGCACTCCATTGGGTCCCCAGCATTACACGAGCCAAGTGTGTATTAGACCTGATGAACGGTCCTCGAGATATTCTAacgacacactcacagagatcCCTCGCTTTATAGTGAGATGCTTTTTCCATTGTCATGAAACATTGGCCATGGAATATACGGAATTCTGTGTGGTGTGCTTATATCTGTACTGAGCCTTAATTGTGTGATACTAATGCAATTGCGAGTAAATCCCGAGCAATGTGGCGTTTTTAATCCGAATGTTGAAATGCAATGGGTAACACTTTCATCAAGCTATCGCGATTTAGCATTTAGCATGCTTTATAAAGCTTCTTTAACGTGCACAGTGAAATGCAGGTTTGTCAGTATGCATGACATGCAAGTTCAATTTGGACCCACGCCTACAGTAAGACTGGAACCTTGCAGCCAATTAACTGTGCAGCACAGTGGGGTTGATAGTGGAGTTAGAGGTTAGAGGTGTTAAATGTTAAGGCTGCTGTTATTCTATGTTCCCATGAACATGTCTCCTACTCTGTCTATGGCACTTGGCCGCAAGcccttttgattttttttttttttattggaattgtaAATCTTTAAAGCTTCGCCAatcaatatttgtttttaatggccATGGGTCGGATgactatgtgatgatgtgtgtttttatgtgaaaGGTGTCCCTTGTAGGAATCAACCCCTAGTTCCCCACTCTACGTAGTGTTTCATTATATTTCAGATCATTGTTTTTATGGCCCACAActgctgttttggttcactctcagtGCTCTATATAACCTGGTTTCCCGCCGGTAGGAAAATCGTCTGATACACCCACGGTACGCCACTTTACAGCACCATAGACAGACAAAATTAGCAggaaaaacagagctaaaaaagaaagaatgttGGACTTACAACACATTACTAACAtgttatctttttttaaagacttaTTTCCCAAAACAACTAAGCGCTGTCAGTTTTTGCTCATGTTACCCATCAGGAGTGAATAAAGCATTTGCTGGGGGGCTAGTTTCCGCTCTTACAGAAATACAGATTTGGTGCTCTAGCAAGAAACTAAAAATAATTTACATGCACTGTTATGAGTGCAGCCGGCCTTCAGAACCTCTGTGCAACAGGATCCAATTAGAAGAATATAACAAAAGAGAGCCAATTAAGGAGATGAGCAAGAGTGAGAACAAAAGAagggatttttaaatcaaatcgtGATACCTATTGAAAGGGACGGTTAGTGTGATTTTTATGACGCCTACACAATCACACCGGTCTCTCAACAGTGTTCggatcaacacattctcactcccatcgagTCAAAAAGTcaggtcaggtgcctttggcgtttgtgattgatgcaaaaagtctcctttagcgtcatatttagatgcacttggtcgggactcttagCATCACTATTTGACGCTCTGGGGCGGGACTCTTGGCAtcacttttattcaatttttttattattattattttttggggcattttcagcctttattttgacaggacaaggcatgaaagtggagagagagggggggaatgacatgcagcaaagggccgcaggtcggagtccaaCCCTGGCCCGCTGTGTGAGTAAACCTCTTTATATGGGctcccgctctaccaactgagctatccgggcgcccattggcatcactttttttttgacgctccgggtcgggactattggcttCACTATTGGACGCTCTTGGGACTCGCAtctagccctttggcgtcatattttGACGCTCTGCGTCAGGATGTAGGTTTagctgacatgcggcacaagaaacgggacagttgggtttaggaaaagatggtgggtggggtaagaaaatgtacatttcagggCCAGGCGGGACTAGAACTGGACATTAACCCCGGTctgctgggtgaaagtcctgtgttgcaTCACCCAAAACCTGCCTCCTTAACGGATTTTAGGTCTTTCATaatactcgctaccgttgtctctTAATACTctgtcatcttacagcgctgtggccaagctgctgctctgcccggtgcgttttCGCGTCGGTATCTGATGccgagagccactgaccaagcatcagTATTTTATGAGTTATCAATCAGTCGCAGAAAATACATctagttgttgtgttttactgtCAGTCACatgaaaaagctaaaacaaaccGTCAGAGAGTATTTGCAAATACAGTCGGACTAAACGTTTTGGTAACCGGTGAAAGAACAGCACCGACCTACAAGCCAaaagattgattttttttcatgcatCTCTGTTCCCCTGTGTAGTTTGAATTTCTTAAACTGTGCTGAAATACTATCTATGTAACGACTactgaaaatgtaaatatgaaaatattataaATCAACAATATGGGTTTGTctaaagaaataaacaagtactgtatgtattttatttgtaaaaaaaacaaccaagaaACTGGACGTTTCGATGAGTGTTAAAGGTATTTATtctttgtttttgctgttgACGTTTTGTGGACTGACCTGCAGTGTATTTGGGAGATGAACAGTAGACTGAGGCCTTGGAGCATTCACCTTCTTATCCCTCTCTGTAAATTATTGACCATAATACTCTTCTTTTTAACACTGTTATGAAAAAGCTTTATGTTTGCTCTTAAGATGCATTATAACTCATCTCGGTCACAATCCAACAGAGCTTCGATGGAGCTGTTTGAGCTGATATCTAACAGTAATGTCTGAGCTCTTTTTAATGTTTAGCGTTGAGTGTATTTAATGTGTCACACCGTGGTTTACTAAGGTCAGGACACTGCCGGGGTGCGATCAGCCGCACAAAACTTTGCAACACCTCCCGAAGttacaaattttacaaaacaaaaaccaccTCTGCTTAACTAGTCTGTGTGAAAAAAGCTCCCAGTTCACTACTGATAAGATATCACTCTTTAAGATTACTCaagttttattattgtgtacCAATGCCTTATCAAATCTGCATAGAGACTTTCCCCCCTTTGTCTGATTAAAACAGTTTTCAAAATA

Function

symbol description
gfod1 Predicted to enable oxidoreductase activity. Is expressed in brain and spinal cord neural tube. Orthologous to human GFOD1 (glucose-fructose oxidoreductase domain containing 1).

NR:

description
glucose-fructose oxidoreductase domain-containing protein 1

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790086.1 True 5806 mRNA 0.45 3 2567665 2615901

Neighbor

gene id symbol gene type direction distance location
slc12a7b LOC103361595 coding upstream 9039 2458659 ~ 2558626 (+)
aoc1 aoc1,LOC102789916 coding upstream 129066 2426160 ~ 2438599 (+)
LOC120552004 aoc1,LOC102789916 coding upstream 254239 2258920 ~ 2313426 (+)
trnan-guu_46 NA coding upstream 916017 1651577 ~ 1651648 (+)
trnan-guu_45 NA coding upstream 916525 1651067 ~ 1651140 (+)
LOC120552716 kif5b coding downstream 8785 2624686 ~ 2672738 (+)
arhgap12b arhgap12 coding downstream 63735 2679636 ~ 2772686 (+)
znf438 znf438,LOC104952784 coding downstream 262611 2878512 ~ 2935569 (+)
jcada kiaa1462 coding downstream 666694 3282595 ~ 3306837 (+)
abcd3a abcd3 coding downstream 786067 3401968 ~ 3433621 (+)
G217489 NA non-coding upstream 3787 2563663 ~ 2563878 (+)
G217449 aoc1,LOC102789916 non-coding upstream 129076 2262547 ~ 2438589 (+)
LOC120552009 NA non-coding upstream 151199 2409885 ~ 2416466 (+)
LOC120552006 NA non-coding upstream 212309 2351351 ~ 2355356 (+)
G217459 NA non-coding upstream 255044 2305543 ~ 2312621 (+)
G217482 NA non-coding downstream 56037 2671938 ~ 2673750 (+)
G217604 NA non-coding downstream 385949 3001850 ~ 3003104 (+)
G217608 NA non-coding downstream 393288 3009189 ~ 3011592 (+)
G217615 NA non-coding downstream 412769 3028670 ~ 3029018 (+)
G217618 NA non-coding downstream 429491 3045392 ~ 3047425 (+)
G217377 NA other upstream 892265 1669162 ~ 1675400 (+)
zcchc2 zcchc2 other upstream 1062450 1462750 ~ 1505215 (+)
G217606 svil other downstream 390382 3006283 ~ 3021642 (+)
LOC120552392 mtpap other downstream 604714 3220615 ~ 3233822 (+)
G217723 cnn3 other downstream 879549 3495450 ~ 3543785 (+)
chchd7 chchd7,LOC102799933 other downstream 1054519 3670420 ~ 3704375 (+)
ppp1r17 NA other downstream 1640147 4256048 ~ 4261598 (+)

Expression


Co-expression Network