LOC120552302


Basic Information

Item Value
gene id LOC120552302
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 24771906 ~ 24777805 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790218.1
TAGGCAGCAGCAGGTGTTTCCTATATGGCTAATTAGCGGAGAGGCTTCAGCGTTTGTAAGCAGAACGTCATGTGGACCGGAGAGTAAAAGCGTCTCTACTTCTGCTTGTTTGTCGAAAAATTTGACTGTAATATTCACCTTTAATTTTTCGAAGCCGGGggatgtttatttggttgttttCATCCCTCCGCGgtgttttattttctgacaGGTTGAGCAAGCACGGGAAAGAAAAATGGACGATGGAAgcaaacaaccacacacattTGGGAGCGGACAACCGAGAGCTCCACATCCCAGACCTTTCTTCTACGTCCAGCCTGCGTCTCAACCTTACCTCTACCAGCAGCAGCACTGGCAGATGAACAACCCATACAGTCACTATGGTGTGCCTGGAGGAGGTTTTAACCGTCCCTGCATGCCCCCGTACCAGTACATGCAATATCCTGGGTTTGTTTTCCCAAACCCATTGTTTGCCCCGTTATATCCAATGGATTACAGGCGGATGTTTGAGCCTCGCTTCCACGCTCCTCCCTGGAATGATATTcctcgccagcagcagcagcggcaacAGTATCACCCACAGACAAACTGGCGTCGAGAAATGGCATGCTCAGAGGCTCAAACCGACCCCAGTGACGCCATAACCAAACTCATAGAATGCCTGGATAAAATCCGAGCCACAGAGCTGCGGGGCGCTGACCGAGAGCTTGACTCGGGTGTCGCCTCACAGGCCTCGGAAACGTTTTTTCCAGGCGAAGAGAAGAAAAGCGAAGAGCAGGGTCACATCCTGCCATCAGCGCTTGGTGACAGCCACTCAGAGTCTCCAGCCACGACCTTCAGTGACTCCACAACCGCGGTGTACGACGGGGATTCCAGCCAAAGGAGCGTGGAAGTCCTGAGTCCTCCAGGATGCTGGTCAGCAGGATTAGAAGAGGAGTGTCCTCTGGATAGCTCCTCTGTTCATGAAGAGTGTCCTGAGCTGGAGCAGACGGCGACAGACGAACACTTACTCCCTCAGGAGAAAACAGAGGTCGCAGATATCCAGTCAAATATCTCAGCGACTGATGAAAGTGTTCCCAAACGTGACGTTGAAGAGCTCCTGAAGCAGCCGACGGATCCAATCCTGCCATCGTCTTCCTTCACCTCCAGTCAGCTGGCGCTCAAAGATGCCAAAAGTGGCGACACAGTCTCAAAGACGGAACATCAGAAAGCTGATCCAAGCTACCAGATCCTCAGGCTGCCTTTTGAGAGCGTTCTGACACCTGGAGAGGCTGGAGGCGCGTGCCTCTCCTCCCCTACTGCTCcctactactacaactacctATCCATGCAGACCACCCATGAGCGGATGAGCGTTCTCAGTCCATCTCTGGACGAGCTTTCCTCCCGAGATGAGATGTTCTCCACAGATCTGGACGATGCAGATCTTTTCCCCAAGCGCGTATATGCAGGCAGGAGGCTCGCAGAGGTGGTGAGCGGGTCTCCGCACGGTGCTGAAGAAGTGGAAGAAGTGTGGCTGCCAGGTTCAAAGAGGTGCATGTGCGCCTGCTGTGGGAAAAGCCTTGCAAAAGGGACCGGAAGGAGCAAAGTCCACAGCTCCAAGGTGTACAGGGATGAAGCCGGAGACTCTGAGGAGGAGAGCAGGTATGGGAGAGGGTGCGAGCAGCCCGTCAGAGTGGTGGTGAGGAAGCATTCTGCACCCAGGAAGCCCCATCCTATCCTGCCCAGACATGCTTCAAAACCTTGGTATAAAAGAGGCCAACACAAAGATCCCTCCGATCCAGTGAACCAGGAGGAAGGTCATGTTTGTATTCATGAGCCGGCTGATGGCGAGATTGGAGAGTTGACTTGTAGTGAGCCGCAGTGCAGAACATGTCAGGACAGACTCTGCAGAGAAGATCTAACCGCGTCAGACCAAGGCAGGTGGGGAGACCGGGACGTGATTCCCAGGAGGAGACAAGCAACCCCTCTGCAACGACAAGAGATGAGTACTCAGAGGAAAGTGATGTACCACAGGCCAAGAGACGAGGACAACGATGACGATGAGCCACCACCATTGCACTGGGAAAGAGGCTCTACGATGAGAGGAGAACCAAGATGTTAAATGTCCCCAAAGTATGTTGAACTGTCCCCCCAAAAGGTGTAATTGTTCCAGGATAATGTGTTAAGAAATATTTAGAGCACCAGGTGAAATGCACTGCACGATGAAGcctctttttttgtttagataaaagttaaaaaaaaaaaaattacaaagttTCTGCAGTGACACTGCCTTGCACTTTTCATGATTTATGAATTTCACAAACAGGCAAATGGGCTGAAAGGTTGTGTGTTGCAGATGATGGTGTGCCACAGTTTGGGGCCAGTccaataaaaataatcattatttaA
>XM_039790219.1
GTGTTTCCTATATGGCTAATTAGCGGAGAGGCTTCAGCGTTTGTAAGCAGAACGTCATGTGGACCGGAGAGTAAAAGCGTCTCTACTTCTGCTTGTTTGTCGAAAAATTTGACTGTAATATTCACCTTTAATTTTTCGAAGCCGGGggatgtttatttggttgttttCATCCCTCCGCGgtgttttattttctgacaGGTTGAGCAAGCACGGGAAAGAAAAATGGACGATGGAAgcaaacaaccacacacattTGGGAGCGGACAACCGAGAGCTCCACATCCCAGACCTTTCTTCTACGTCCAGCCTGCGTCTCAACCTTACCTCTACCAGCAGCAGCACTGGCAGATGAACAACCCATACAGTCACTATGGTGTGCCTGGAGGAGGTTTTAACCGTCCCTGCATGCCCCCGTACCAGTACATGCAATATCCTGGGTTTGTTTTCCCAAACCCATTGTTTGCCCCGTTATATCCAATGGATTACAGGCGGATGTTTGAGCCTCGCTTCCACGCTCCTCCCTGGAATGATATTcctcgccagcagcagcagcggcaacAGTATCACCCACAGACAAACTGGCGTCGAGAAATGGCATGCTCAGAGGCTCAAACCGACCCCAGTGACGCCATAACCAAACTCATAGAATGCCTGGATAAAATCCGAGCCACAGAGCTGCGGGGCGCTGACCGAGAGCTTGACTCGGGTGTCGCCTCACAGGCCTCGGAAACGTTTTTTCCAGGCGAAGAGAAGAAAAGCGAAGAGCAGGGTCACATCCTGCCATCAGCGCTTGGTGACAGCCACTCAGAGTCTCCAGCCACGACCTTCAGTGACTCCACAACCGCGGTGTACGACGGGGATTCCAGCCAAAGGAGCGTGGAAGTCCTGAGTCCTCCAGGATGCTGGTCAGCAGGATTAGAAGAGGAGTGTCCTCTGGATAGCTCCTCTGTTCATGAAGAGTGTCCTGAGCTGGAGCAGACGGCGACAGACGAACACTTACTCCCTCAGGAGAAAACAGAGGTCGCAGATATCCAGTCAAATATCTCAGCGACTGATGAAAGTGTTCCCAAACGTGACGTTGAAGAGCTCCTGAAGCAGCCGACGGATCCAATCCTGCCATCGTCTTCCTTCACCTCCAGTCAGCTGGCGCTCAAAGATGCCAAAAGTGGCGACACAGTCTCAAAGACGGAACATCAGAAAGCTGATCCAAGCTACCAGATCCTCAGGCTGCCTTTTGAGAGCGTTCTGACACCTGGAGAGGCTGGAGGCGCGTGCCTCTCCTCCCCTACTGCTCcctactactacaactacctATCCATGCAGACCACCCATGAGCGGATGAGCGTTCTCAGTCCATCTCTGGACGAGCTTTCCTCCCGAGATGAGATGTTCTCCACAGATCTGGACGATGCAGATCTTTTCCCCAAGCGCGTATATGCAGGCAGGAGGCTCGCAGAGGTGGTGAGCGGGTCTCCGCACGGTGCTGAAGAAGTGGAAGAAGTGTGGCTGCCAGGTTCAAAGAGGTGCATGTGCGCCTGCTGTGGGAAAAGCCTTGCAAAAGGGACCGGAAGGAGCAAAGTCCACAGCTCCAAGGTGTACAGGGATGAAGCCGGAGACTCTGAGGAGGAGAGCAGGTATGGGAGAGGGTGCGAGCAGCCCGTCAGAGTGGTGGTGAGGAAGCATTCTGCACCCAGGAAGCCCCATCCTATCCTGCCCAGACATGCTTCAAAACCTTGGTATAAAAGAGGCCAACACAAAGATCCCTCCGATCCAGTGAACCAGGAGGAAGGTCATGTTTGTATTCATGAGCCGGCTGATGGCGAGATTGGAGAGTTGACTTGTAGTGAGCCGCAGTGCAGAACATGTCAGGACAGACTCTGCAGAGAAGATCTAACCGCGTCAGACCAAGGCAGGTGGGGAGACCGGGACGTGATTCCCAGGAGGAGACAAGCAACCCCTCTGCAACGACAAGAGATGAGTACTCAGAGGAAAGTGATGTACCACAGGCCAAGAGACGAGGACAACGATGACGATGAGCCACCACCATTGCACTGGGAAAGAGGCTCTACGATGAGAGGAGAACCAAGATGTTAAATGTCCCCAAAGTATGTTGAACTGTAGGTGAAATATGCCCACAGCTCTGCACAAGatgaaacattatttttttagatttgtTCAAACTTCTGTCTTGGTGAAATGTTGTCTTTCTTTCCCAGGTCCCCCCAAAAGGTGTAATTGTTCCAGGATAATGTGTTAAGAAATATTTAGAGCACCAGGTGAAATGCACTGCACGATGAAGcctctttttttgtttagataaaagttaaaaaaaaaaaaattacaaagttTCTGCAGTGACACTGCCTTGCACTTTTCATGATTTATGAATTTCACAAACAGGCAAATGGGCTGAAAGGTTGTGTGTTGCAGATGATGGTGTGCCACAGTTTGGGGCCAGTccaataaaaataatcattatttaA
>XM_039790220.1
GTGTTTCCTATATGGCTAATTAGCGGAGAGGCTTCAGCGTTTGTAAGCAGAACGTCATGTGGACCGGAGAGTAAAAGCGTCTCTACTTCTGCTTGTTTGTCGAAAAATTTGACTGTAATATTCACCTTTAATTTTTCGAAGCCGGGggatgtttatttggttgttttCATCCCTCCGCGgtgttttattttctgacaGGTTGAGCAAGCACGGGAAAGAAAAATGGACGATGGAAgcaaacaaccacacacattTGGGAGCGGACAACCGAGAGCTCCACATCCCAGACCTTTCTTCTACGTCCAGCCTGCGTCTCAACCTTACCTCTACCAGCAGCAGCACTGGCAGATGAACAACCCATACAGTCACTATGGTGTGCCTGGAGGAGGTTTTAACCGTCCCTGCATGCCCCCGTACCAGTACATGCAATATCCTGGGTTTGTTTTCCCAAACCCATTGTTTGCCCCGTTATATCCAATGGATTACAGGCGGATGTTTGAGCCTCGCTTCCACGCTCCTCCCTGGAATGATATTcctcgccagcagcagcagcggcaacAGTATCACCCACAGACAAACTGGCGTCGAGAAATGGCATGCTCAGAGGCTCAAACCGACCCCAGTGACGCCATAACCAAACTCATAGAATGCCTGGATAAAATCCGAGCCACAGAGCTGCGGGGCGCTGACCGAGAGCTTGACTCGGGTGTCGCCTCACAGGCCTCGGAAACGTTTTTTCCAGGCGAAGAGAAGAAAAGCGAAGAGCAGGGTCACATCCTGCCATCAGCGCTTGGTGACAGCCACTCAGAGTCTCCAGCCACGACCTTCAGTGACTCCACAACCGCGGTGTACGACGGGGATTCCAGCCAAAGGAGCGTGGAAGTCCTGAGTCCTCCAGGATGCTGGTCAGCAGGATTAGAAGAGGAGTGTCCTCTGGATAGCTCCTCTGTTCATGAAGAGTGTCCTGAGCTGGAGCAGACGGCGACAGACGAACACTTACTCCCTCAGGAGAAAACAGAGGTCGCAGATATCCAGTCAAATATCTCAGCGACTGATGAAAGTGTTCCCAAACGTGACGTTGAAGAGCTCCTGAAGCAGCCGACGGATCCAATCCTGCCATCGTCTTCCTTCACCTCCAGTCAGCTGGCGCTCAAAGATGCCAAAAGTGGCGACACAGTCTCAAAGACGGAACATCAGAAAGCTGATCCAAGCTACCAGATCCTCAGGCTGCCTTTTGAGAGCGTTCTGACACCTGGAGAGGCTGGAGGCGCGTGCCTCTCCTCCCCTACTGCTCcctactactacaactacctATCCATGCAGACCACCCATGAGCGGATGAGCGTTCTCAGTCCATCTCTGGACGAGCTTTCCTCCCGAGATGAGATGTTCTCCACAGATCTGGACGATGCAGATCTTTTCCCCAAGCGCGTATATGCAGGCAGGAGGCTCGCAGAGGTGGTGAGCGGGTCTCCGCACGGTGCTGAAGAAGTGGAAGAAGTGTGGCTGCCAGGTTCAAAGAGGTGCATGTGCGCCTGCTGTGGGAAAAGCCTTGCAAAAGGGACCGGAAGGAGCAAAGTCCACAGCTCCAAGGTGTACAGGGATGAAGCCGGAGACTCTGAGGAGGAGAGCAGGTATGGGAGAGGGTGCGAGCAGCCCGTCAGAGTGGTGGTGAGGAAGCATTCTGCACCCAGGAAGCCCCATCCTATCCTGCCCAGACATGCTTCAAAACCTTGGTATAAAAGAGGCCAACACAAAGATCCCTCCGATCCAGTGAACCAGGAGGAAGGTCATGTTTGTATTCATGAGCCGGCTGATGGCGAGATTGGAGAGTTGACTTGTAGTGAGCCGCAGTGCAGAACATGTCAGGACAGACTCTGCAGAGAAGATCTAACCGCGTCAGACCAAGGCAGGTGGGGAGACCGGGACGTGATTCCCAGGAGGAGACAAGCAACCCCTCTGCAACGACAAGAGATGAGTACTCAGAGGAAAGTGATGTACCACAGGCCAAGAGACGAGGACAACGATGACGATGAGCCACCACCATTGCACTGGGAAAGAGGCTCTACGATGAGAGGAGAACCAAGATGTTAAATGTCCCCAAAGTCCCCCCAAAAGGTGTAATTGTTCCAGGATAATGTGTTAAGAAATATTTAGAGCACCAGGTGAAATGCACTGCACGATGAAGcctctttttttgtttagataaaagttaaaaaaaaaaaaattacaaagttTCTGCAGTGACACTGCCTTGCACTTTTCATGATTTATGAATTTCACAAACAGGCAAATGGGCTGAAAGGTTGTGTGTTGCAGATGATGGTGTGCCACAGTTTGGGGCCAGTccaataaaaataatcattatttaA

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790218.1 False 2397 mRNA 0.51 7 24771906 24777805
XM_039790219.1 True 2483 mRNA 0.51 6 24771906 24777792
XM_039790220.1 False 2372 mRNA 0.51 7 24771906 24777792

Neighbor

gene id symbol gene type direction distance location
LOC120552289 NA coding downstream 1695 24764661 ~ 24770211 (-)
rnf152 rnf152 coding downstream 48066 24660111 ~ 24723840 (-)
mc4r LOC104930272,LOC103365861,LOC104961440 coding downstream 410690 24357609 ~ 24361216 (-)
drosha drosha coding downstream 474055 24193378 ~ 24297851 (-)
cdh10a LOC102783614,LOC100705471,LOC101477094,LOC102310056,LOC102199257 coding downstream 1105049 23633683 ~ 23666857 (-)
psme2 psme2 coding upstream 84705 24862510 ~ 24869834 (-)
emc9 emc9 coding upstream 140567 24918372 ~ 24923172 (-)
LOC120552233 LOC100707500,LOC102204569,LOC102296665,LOC101471184 coding upstream 314772 25092577 ~ 25179568 (-)
LOC120552454 NA coding upstream 404407 25182212 ~ 25197533 (-)
LOC120551896 LOC101467476,LOC100708037,LOC105920600,LOC101173583 coding upstream 421257 25199062 ~ 25229544 (-)
G222062 cdh20,LOC103456703,LOC102782851 non-coding downstream 162227 24609461 ~ 24609679 (-)
G222041 LOC104961439,LOC108234716,LOC107988374,LOC107089423 non-coding downstream 579106 24189134 ~ 24192800 (-)
G222039 NA non-coding downstream 593919 24177740 ~ 24177987 (-)
G222038 LOC104961439,LOC107383085 non-coding downstream 603357 24168312 ~ 24168549 (-)
G222037 LOC105920180,LOC107100491,LOC106522295,LOC107383085 non-coding downstream 619144 24152479 ~ 24152762 (-)
G222088 NA non-coding upstream 17061 24794866 ~ 24795350 (-)
LOC120552180 NA non-coding upstream 116767 24894572 ~ 24904700 (-)
LOC120552179 NA non-coding upstream 150519 24928324 ~ 24954497 (-)
G223155 NA non-coding upstream 218821 24996626 ~ 25023914 (-)
G223181 NA non-coding upstream 229684 25007489 ~ 25011818 (-)
LOC120552322 cdh12,LOC108234660,LOC100695194,LOC101477368 other downstream 1252380 23401543 ~ 23519526 (-)
smpx smpx other downstream 2553525 22202767 ~ 22218381 (-)
LOC120552473 NA other downstream 2651295 22114382 ~ 22120611 (-)
tfr1b NA other downstream 2760820 21990017 ~ 22011086 (-)
rbis LOC101064519,LOC103367294,LOC102312013 other downstream 3550239 21217680 ~ 21221667 (-)
avl9 avl9 other upstream 18784 24796589 ~ 24854888 (-)
msl2b msl2,LOC102304425,LOC102778660 other upstream 185612 24963417 ~ 24968106 (-)
LOC120552232 LOC103371349 other upstream 258079 25035884 ~ 25086902 (-)
LOC120552299 NA other upstream 778668 25556473 ~ 25562540 (-)
LOC120552722 NA other upstream 944685 25722490 ~ 25738940 (-)

Expression


Co-expression Network