LOC120552328 (epc1,LOC102784371,LOC100694393)


Basic Information

Item Value
gene id LOC120552328
gene name epc1,LOC102784371,LOC100694393
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 22841027 ~ 22888231 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790271.1
TCGCGAGCGCGCACGCGTGCGAAACTGCGTGGGAATGGCTGTTTGTGTGATCGAGGGGGTTGGGCCGCTTGGAGTGAGCGGAGAGCTGCATGAGTTTGTAATGTCCGCCATGTTGGCCATGGCGTATTGAACCGGGGAGGAACAGCGGAGCCTACGAAAAAAAGAGACCGACAGAGAGCGACCAAGACCCGGGCCTGCCCGGCTCTGACCGCGCTGCTACGGACCCAAGCCTGCCCTCAATCGACCGACTGACTCCTGGAGACCGTCACAGATTTATCCATGAGAACTCGAGGCAGACCTGCTGTTATTCCTAGCAGATCGAATAGATTTATGCTGCatcttttaatataaaaatgagtAAATTGTCGTTTCGGGCACGGGCGCTGGATGCTAGTAAGCCTCTACCCGTCTTCCGCTGCGAGGATTTGCCTGACCTGCACGAATATGCCTCAATCAACCGGGCAGTGCCGCAGATGCCGACTGGGATGGAAAAAGAGGAGGAATcgGAGCACCATCTCCAGCGGGCCATCTCGGCGCAGCAGGTATATGGCGAGAAGCACAACATGGTCATCCCCGTCCCCGAGGCAGAGCGCAACATCACGCACTACGAGTCCCTCTACCCCGGGGAGTTCAAGATGCCAAAGCAGCTTATTCACATACAGCCTTTCAGTTTGGATACAGAGCAGCCTGActacgacctagattcagaggATGAGACGTTTGTGAATAAGCTGAAGAAGAAAATGGAAATTACTGCCCTGCAGTTTGAAGAAATGATAGATCGACTGGAGAAAGGCAGTGGACAGCAGCTCGTCAGTCTCCAGGAGGCCAAACTGTTGCTGAAGGAGGACGATGAGCTGATCAAGGAGGTGTTTGACTACTGGAGCCGCAAAAGGAAAACCTGCAAGGGTGGCTCCCTCATCCCCAACGTCAAGCAGGAGAAGAGGGACGGCTCCAGCACCAGCGACCCCTATGTGGCCTTCCGCCGACGAACCGAGAAGATGCAGACCAGAAAGAACCGAAAGAATGACGAGGCATCATATGAGAAGATGCTGAAACTGCGCAGGGACCTGAGCCGAGCTGTCACCATCCTGGAGATGATCAAGAGGCgggaaaagagcaagagagaacTGCTGCACCTCACACTGGAGATTGTGGAAAAGAGGAATGTGATGCCAGACTTCGGCAGTGAGGTGATGGCAGAGGCACTTGCGCAGCGAGCTCTGGTGAAGCCTGTCTACACCATCCCCATCATTCCCCCATCCACCAGTAATCAGTACAGACATCAGGACCACTTGGATATAAAGGACTACAAAAAACCGGAGAAAACGGAGGCAGTACGAACCAAAAGGAAATATGAAAAGAAACCCAAGATCCCTCCTCTGTCAGCGCCTCAACATTCAGGGCCGTCGGTGTTCAATCCCAAGGACCTCAACCAGTACGATTTCCCCAGTTCAGATGAAGAGCCCTTCTCACAGATCCATTCAGGTTCCTCGGAGGCAGAAGAGGAGAATGACCCAGATGGCTGCTATGCGTTCAGGAGGAAGGCCGGCTGTCAGTACTACGCTTCTCGTCCGGACCAGAATTGCAACTGGCCCTGGGTAAGCCCGTCAGAGGGTGGGCTTGGCAACCCGCGCTTCCGCTTCTGTCTGACCTCGCTGAACATGCCGCCGCGCTGCATAGGTTTGGCACGGCGCCGCTCGGGCAGAGGAGGCAGGATCTTGTTGGACAGAGCGCATACAGATCTAGACAGCCTCCGTCAGAGCCTGGACTCTGACCCGGAGCCCGAACCGCTCGCCTCACCACTTCCAAGTTCTCCGCTCCGCAACTCCAACGCCAGTACCTCAGAAACCAATACCTCGCACCCAGCCAGCTCCTCCCACCTTCCCCCCTCTTCATCACCCCTGTCATCGTCGTCGTCATCTGCAACACCTATGGACCTCTGCCAGATTCTTTTGAACATTAAATCTTGCCGCTGGAGGCACTTCAGACCACGGACGCTATCCCATCACCCCTTGGGTGGAGGAGACTTGTCTCGCAGAGGATTTAGGGATTATAGCCGGACAGTGTCAGGACTAACCCGGACCCTGTCTGGAGGGGCCAGCTCCCAAAACCGCACCGGCCCGCCCCCCGCCCCGGTCAATGTGTTCACGGCAGAGCAGTACCAGCAGCACCAGGAGCAGCTGGCCCACATGCAGAAACAGCAGCTGGAGCAGAGcaaacagcagcaacaagcCAACAACTCTGCAGCAGCTACCAACCCACAGGCTCTGGTGTCCAAGACGTTGGACCAGGCCAGCGCCCAGTTTGCTGCCTCGGCCCTCGTCACCACGGACCAGCTGCTGGCCTTCAAGTCCAAAGAGGAGCTGGTGCTGGCAGGGGGAGTCAACGGGGTCCTGACCGGTGCAGGTGTTTTCAAAGGCTTGCACCTCTCCAGCACCACCGCGGCCCTTCACCAGACCAACCAGTCGACGCACACTACCCCCTCCGCGGCCCCGACCTTCCTCCAGCCCTCTTCCAACCTGGCGGCCCATTCGCCCGCCAACGCCGTCCCCACCTCCCTCGCCTCCACCCCCAGCGCCCATgcagcggcggcggcggcggcgctGGGGATCCTGGGATGCAACGCCGCCAACGCCACCCCTGCCACCACTCAGGTCCTCATCGGGAACAACATCTGTCTGAGCGTGCCGTCGGCCGGACGCCACATTCCCCGGACCCTCGGCAACGTGCCACCCTCTGCCTTAAAGCTGTCCGCCACCACCAACCTGCAGATGCCCAAAGTCTCTGGAGCGTCGTCCCTGGACATGGGCTCAAGGGATAATCACGACGAAGACAAGCCAGCACTGAACAGTATAGCAGACAACACAGTGGCCATGGAGGTGACGTAGTAGCGGTGCAGTGAAGAGTCCACTCTTTAGGTGCTGTGCATCGTAGCATCGGGAATGCAAAAAGGGACAGCAGGACTCTGGCGCAGACCGACAGAGCGACGGGTGGCCACGGCCGCTCGCTTGCAATTCTCATCTCTCAtactttttaaacctttttttttttttttgttattttgttactGTTAAAAGTAAAAGATCTGTAAATTATGAATATGGCAAAATTAGTATCTGTACAGTAACTACATATTTGTAATATCCCCTTGTATATATTACTTGAATACAGAACTGTCcatttgtgatgtttttttttgcacttggAGTCAaacttaaaaggaaaaaaaagtcaaccaAGTAAGTTGAGTGTGAGAGATGCGGGAGTTGTATAGAGAAGAGTTTTATCACATCATGTGCATGGTGCGGAGCCTGCtgtttttatctatttattgtGCTGTGtttacaggttttttttgttttgcttttgtttgtaattctttttttatttgtacacTGTACCTTTGTTGGTTCCTGTGCTGTAGTAAATGTTAGGTAGCTACGGACTCCTGggtatttttgtatattgtgAACACAAAGCAGGTTCCCCCTCCCAACGTTTGTTTTGGGTCCCTGTGCTTCTCTCTGTGGATCATGTGAAAATCAATGGTGACATACATAcaggtcaggaggaggaggaggaagatgaagatgaGGCGGTGTGTTGGCGGCTGACTGTGGTTCACTTGAAGAGAGGCGCGCCCCCTCTTCCTGGGAGCTTCCATTAACATTGTCCCAAACACAAGTAACAAAACAGGGATGAAGTCTCTTCCCAGAAGCCTCTGCTGCTTCAGATTTAAAGCACTAtttttttgtgatgtttttgttCATGGTTTTGATAAATATTAATGCTgcttttgtattcttttttttttttttttaaaggggttgTTCTTCATTTTCATGCAAGCGGAGTCCCCTTTCCATTTGTTTTATCCCccaaacatttttgtaaaacagaagttcagttatttttgtatttttttttttctttttcttttcttgtggTCGACATGATTGTAAACTTTTCGTTAATTGAAAGACTTCATTCTTTTGTTCGTTACTTGTTCATGTATAGGTGATAAGGGAGGCGGATGGGCAGTAATCGCTGTACGTGTCTCATCATTCCagttttttaataacaaaaaaaatgctaaTGAGGGGACTGAGGAGGAGTGGTGggaaaacggcagttttctcctctctcttcccctttttctttattttttttttttttgttttctttttttttctttgaaaaaataATCTCCAGACGGCTGCAAGGCCAAAAACCACAAGTATTGGGTGCCTTCCTTTGGGGAATTTTATGTACTCTCTTCTGTGAAGAGTTAGGCACAAAGGCAGCATTACTTAGTAGTGCTTCTCGTCTTTGTCAGAATCTGAATGCCCAGTCCAATGGCAGGATATATCCTTGAGGTTTACTTGTCCCACCTGGAGGCTGAAaagactaaaaaaaataaaataaaaaaatgtgacaGAACTCTCACTAAAATAAGACAATAAAGCCCAGGGCATTAAATGTGAA
>XM_039790272.1
CTCCTGCAAAGTGGCTTGGTGGTCAGTTTggatctttttatttttgtcgaAGTAACCTTAGCGAACTATACAAGTTTTACCGTGAGCGACAGGACAACATTTTCTCTACTGTAGCTTCTGATTCCAGCGACCTCTTACAGTGACTTCACCGCACTTTCAAATAGAACATTAAAAATCGTTTTCCTCTGAGGCGTCCTGAAGGGAGCTAACCAGCGTTAGCATTGGGCTAGCATGACAACCAGAAGAAGAACTGCCATCACCCTCCTCATCATTCTCCCCTGTGGCTTTGCTAGCAGCGGGTCTCCATCATGGTCTACAGCTGTGAGCCTAATGCTCCCAAATGGATGATGATTATAATGTCGGCCTTCCACATCTATATCATTCACTCGTGCCCAAAGGAATTCTCACCTACCCCTACAGGAGCACCATCTCCAGCGGGCCATCTCGGCGCAGCAGGTATATGGCGAGAAGCACAACATGGTCATCCCCGTCCCCGAGGCAGAGCGCAACATCACGCACTACGAGTCCCTCTACCCCGGGGAGTTCAAGATGCCAAAGCAGCTTATTCACATACAGCCTTTCAGTTTGGATACAGAGCAGCCTGActacgacctagattcagaggATGAGACGTTTGTGAATAAGCTGAAGAAGAAAATGGAAATTACTGCCCTGCAGTTTGAAGAAATGATAGATCGACTGGAGAAAGGCAGTGGACAGCAGCTCGTCAGTCTCCAGGAGGCCAAACTGTTGCTGAAGGAGGACGATGAGCTGATCAAGGAGGTGTTTGACTACTGGAGCCGCAAAAGGAAAACCTGCAAGGGTGGCTCCCTCATCCCCAACGTCAAGCAGGAGAAGAGGGACGGCTCCAGCACCAGCGACCCCTATGTGGCCTTCCGCCGACGAACCGAGAAGATGCAGACCAGAAAGAACCGAAAGAATGACGAGGCATCATATGAGAAGATGCTGAAACTGCGCAGGGACCTGAGCCGAGCTGTCACCATCCTGGAGATGATCAAGAGGCgggaaaagagcaagagagaacTGCTGCACCTCACACTGGAGATTGTGGAAAAGAGGAATGTGATGCCAGACTTCGGCAGTGAGGTGATGGCAGAGGCACTTGCGCAGCGAGCTCTGGTGAAGCCTGTCTACACCATCCCCATCATTCCCCCATCCACCAGTAATCAGTACAGACATCAGGACCACTTGGATATAAAGGACTACAAAAAACCGGAGAAAACGGAGGCAGTACGAACCAAAAGGAAATATGAAAAGAAACCCAAGATCCCTCCTCTGTCAGCGCCTCAACATTCAGGGCCGTCGGTGTTCAATCCCAAGGACCTCAACCAGTACGATTTCCCCAGTTCAGATGAAGAGCCCTTCTCACAGATCCATTCAGGTTCCTCGGAGGCAGAAGAGGAGAATGACCCAGATGGCTGCTATGCGTTCAGGAGGAAGGCCGGCTGTCAGTACTACGCTTCTCGTCCGGACCAGAATTGCAACTGGCCCTGGGTAAGCCCGTCAGAGGGTGGGCTTGGCAACCCGCGCTTCCGCTTCTGTCTGACCTCGCTGAACATGCCGCCGCGCTGCATAGGTTTGGCACGGCGCCGCTCGGGCAGAGGAGGCAGGATCTTGTTGGACAGAGCGCATACAGATCTAGACAGCCTCCGTCAGAGCCTGGACTCTGACCCGGAGCCCGAACCGCTCGCCTCACCACTTCCAAGTTCTCCGCTCCGCAACTCCAACGCCAGTACCTCAGAAACCAATACCTCGCACCCAGCCAGCTCCTCCCACCTTCCCCCCTCTTCATCACCCCTGTCATCGTCGTCGTCATCTGCAACACCTATGGACCTCTGCCAGATTCTTTTGAACATTAAATCTTGCCGCTGGAGGCACTTCAGACCACGGACGCTATCCCATCACCCCTTGGGTGGAGGAGACTTGTCTCGCAGAGGATTTAGGGATTATAGCCGGACAGTGTCAGGACTAACCCGGACCCTGTCTGGAGGGGCCAGCTCCCAAAACCGCACCGGCCCGCCCCCCGCCCCGGTCAATGTGTTCACGGCAGAGCAGTACCAGCAGCACCAGGAGCAGCTGGCCCACATGCAGAAACAGCAGCTGGAGCAGAGcaaacagcagcaacaagcCAACAACTCTGCAGCAGCTACCAACCCACAGGCTCTGGTGTCCAAGACGTTGGACCAGGCCAGCGCCCAGTTTGCTGCCTCGGCCCTCGTCACCACGGACCAGCTGCTGGCCTTCAAGTCCAAAGAGGAGCTGGTGCTGGCAGGGGGAGTCAACGGGGTCCTGACCGGTGCAGGTGTTTTCAAAGGCTTGCACCTCTCCAGCACCACCGCGGCCCTTCACCAGACCAACCAGTCGACGCACACTACCCCCTCCGCGGCCCCGACCTTCCTCCAGCCCTCTTCCAACCTGGCGGCCCATTCGCCCGCCAACGCCGTCCCCACCTCCCTCGCCTCCACCCCCAGCGCCCATgcagcggcggcggcggcggcgctGGGGATCCTGGGATGCAACGCCGCCAACGCCACCCCTGCCACCACTCAGGTCCTCATCGGGAACAACATCTGTCTGAGCGTGCCGTCGGCCGGACGCCACATTCCCCGGACCCTCGGCAACGTGCCACCCTCTGCCTTAAAGCTGTCCGCCACCACCAACCTGCAGATGCCCAAAGTCTCTGGAGCGTCGTCCCTGGACATGGGCTCAAGGGATAATCACGACGAAGACAAGCCAGCACTGAACAGTATAGCAGACAACACAGTGGCCATGGAGGTGACGTAGTAGCGGTGCAGTGAAGAGTCCACTCTTTAGGTGCTGTGCATCGTAGCATCGGGAATGCAAAAAGGGACAGCAGGACTCTGGCGCAGACCGACAGAGCGACGGGTGGCCACGGCCGCTCGCTTGCAATTCTCATCTCTCAtactttttaaacctttttttttttttttgttattttgttactGTTAAAAGTAAAAGATCTGTAAATTATGAATATGGCAAAATTAGTATCTGTACAGTAACTACATATTTGTAATATCCCCTTGTATATATTACTTGAATACAGAACTGTCcatttgtgatgtttttttttgcacttggAGTCAaacttaaaaggaaaaaaaagtcaaccaAGTAAGTTGAGTGTGAGAGATGCGGGAGTTGTATAGAGAAGAGTTTTATCACATCATGTGCATGGTGCGGAGCCTGCtgtttttatctatttattgtGCTGTGtttacaggttttttttgttttgcttttgtttgtaattctttttttatttgtacacTGTACCTTTGTTGGTTCCTGTGCTGTAGTAAATGTTAGGTAGCTACGGACTCCTGggtatttttgtatattgtgAACACAAAGCAGGTTCCCCCTCCCAACGTTTGTTTTGGGTCCCTGTGCTTCTCTCTGTGGATCATGTGAAAATCAATGGTGACATACATAcaggtcaggaggaggaggaggaagatgaagatgaGGCGGTGTGTTGGCGGCTGACTGTGGTTCACTTGAAGAGAGGCGCGCCCCCTCTTCCTGGGAGCTTCCATTAACATTGTCCCAAACACAAGTAACAAAACAGGGATGAAGTCTCTTCCCAGAAGCCTCTGCTGCTTCAGATTTAAAGCACTAtttttttgtgatgtttttgttCATGGTTTTGATAAATATTAATGCTgcttttgtattcttttttttttttttttaaaggggttgTTCTTCATTTTCATGCAAGCGGAGTCCCCTTTCCATTTGTTTTATCCCccaaacatttttgtaaaacagaagttcagttatttttgtatttttttttttctttttcttttcttgtggTCGACATGATTGTAAACTTTTCGTTAATTGAAAGACTTCATTCTTTTGTTCGTTACTTGTTCATGTATAGGTGATAAGGGAGGCGGATGGGCAGTAATCGCTGTACGTGTCTCATCATTCCagttttttaataacaaaaaaaatgctaaTGAGGGGACTGAGGAGGAGTGGTGggaaaacggcagttttctcctctctcttcccctttttctttattttttttttttttgttttctttttttttctttgaaaaaataATCTCCAGACGGCTGCAAGGCCAAAAACCACAAGTATTGGGTGCCTTCCTTTGGGGAATTTTATGTACTCTCTTCTGTGAAGAGTTAGGCACAAAGGCAGCATTACTTAGTAGTGCTTCTCGTCTTTGTCAGAATCTGAATGCCCAGTCCAATGGCAGGATATATCCTTGAGGTTTACTTGTCCCACCTGGAGGCTGAAaagactaaaaaaaataaaataaaaaaatgtgacaGAACTCTCACTAAAATAAGACAATAAAGCCCAGGGCATTAAATGTGAA

Function

symbol description
epc1 Predicted to contribute to histone acetyltransferase activity. Involved in histone H2A acetylation; histone H4 acetylation; and negative regulation of transcription, DNA-templated. Acts upstream of or within negative regulation of gene expression, epigenetic; negative regulation of transcription by RNA polymerase II; and positive regulation of transcription by RNA polymerase II. Located in nuclear membrane and nucleoplasm. Part of Piccolo NuA4 histone acetyltransferase complex.

NR:

description
PREDICTED: enhancer of polycomb homolog 1 isoform X1

GO:

id name namespace
GO:0032777 Piccolo NuA4 histone acetyltransferase complex cellular_component

KEGG:

id description
K11322 EPC; enhancer of polycomb-like protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790271.1 True 4488 mRNA 0.51 14 22841027 22882297
XM_039790272.1 False 4402 mRNA 0.50 15 22841027 22888231

Neighbor

gene id symbol gene type direction distance location
LOC120552530 LOC103365300 coding downstream 39278 22697027 ~ 22801749 (-)
ggh ggh,LOC100704938,LOC108234706,LOC101480685 coding downstream 144163 22691030 ~ 22696864 (-)
LOC120552124 NA coding downstream 152625 22679691 ~ 22688402 (-)
LOC120551932 klhl34 coding downstream 640981 22195236 ~ 22200046 (-)
tnk2a LOC103363574 coding downstream 849680 21953645 ~ 21991347 (-)
LOC120552717 LOC104965202,LOC103365305 coding upstream 24331 22912562 ~ 22921256 (-)
LOC120552718 NA coding upstream 180489 23068720 ~ 23070897 (-)
LOC120552656 cdh18,LOC102310872 coding upstream 240413 23128644 ~ 23308035 (-)
cdh10a LOC102783614,LOC100705471,LOC101477094,LOC102310056,LOC102199257 coding upstream 745452 23633683 ~ 23666857 (-)
drosha drosha coding upstream 1305147 24193378 ~ 24297851 (-)
G221857 NA non-coding downstream 501157 22337075 ~ 22339870 (-)
LOC120552529 NA non-coding downstream 505543 22325273 ~ 22335484 (-)
G221844 ptchd1 non-coding downstream 532793 22307488 ~ 22308234 (-)
G221843 ptchd1 non-coding downstream 539812 22300418 ~ 22301215 (-)
G221837 NA non-coding downstream 541452 22243807 ~ 22299575 (-)
G221926 NA non-coding upstream 71135 22959366 ~ 22960660 (-)
G221928 NA non-coding upstream 93733 22981964 ~ 22982351 (-)
G221933 NA non-coding upstream 151618 23039849 ~ 23040134 (-)
LOC120552653 NA non-coding upstream 182723 23070954 ~ 23071831 (-)
G221950 NA non-coding upstream 231547 23119778 ~ 23120288 (-)
smpx smpx other downstream 622646 22202767 ~ 22218381 (-)
LOC120552473 NA other downstream 720416 22114382 ~ 22120611 (-)
tfr1b NA other downstream 829941 21990017 ~ 22011086 (-)
rbis LOC101064519,LOC103367294,LOC102312013 other downstream 1619360 21217680 ~ 21221667 (-)
LOC120552536 fbxl7 other downstream 1978339 20835178 ~ 20862688 (-)
LOC120552322 cdh12,LOC108234660,LOC100695194,LOC101477368 other upstream 513312 23401543 ~ 23519526 (-)
avl9 avl9 other upstream 1908358 24796589 ~ 24854888 (-)
msl2b msl2,LOC102304425,LOC102778660 other upstream 2075186 24963417 ~ 24968106 (-)
LOC120552232 LOC103371349 other upstream 2147653 25035884 ~ 25086902 (-)
LOC120552299 NA other upstream 2668242 25556473 ~ 25562540 (-)

Expression


Co-expression Network