anxa13 (LOC107081825,LOC103456771,LOC105935762,LOC106515547,LOC103140553,LOC103370912)
Chromosome Information
Item |
Value |
chromosome id |
NC_053133.1 |
NCBI id |
CM020930.1
|
chromosome length |
31697812 |
location |
21575606 ~ 21587153 (-) |
genome version |
GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
Sequence
>XM_039790299.1
GGTGACGTCACATGCTGCCTGCTTTGGGCccgtagactttttttttttgggccgcAGCTTGTACCAGGAGGACAAGTATCCCAAACTAGGACTTTTTCTCCAACAGATCACCAGCCGCAGCCGGAAAACACATCCTCAAAATGGGCAACTGTCAACCCACTATCGTGCACTATGAGGATTTTGATGTCGTGGCTGACATTAAGGCCATCCGTAAAGCCTGCAAAGGGTTTGGAACTGATGAGCAGGCCATCATTGACATCCTGGCAAACCGTAGCGCAGCTCAGCGTCAGGAAATTAAATATGCCTATTTTGAAAAGTATGATGATGAGTTGGTggatgttttgaaaaaagaattGTCTGGGAGCTTTGAGAACGCCATCCTTGCCATGCTGGACCCGCCCGTCGTCTTCGCTGTGAAGGAGCTGAGGAAGGCCATGAAGGGAGCAGGCACTGATGAAGACGTCCTGGTGGAGATCCTGTGCACCGCCACCAACGCTGACATTGCCATGTTCAAGGAATGCTACTTTCAAGTGCATGAGCGTGACCTTGAAGCAGATATTGAGGGAGACACAAGCGGGGATGTAAGGAATCTGCTGACGGCTCTATTGCAGGGCAACAGAGATGAGAGTTACGAGGTGGATGAGGAATTGGCTGAACAAGATGCTACCTGCCTGTTTGAGGCTGGAGAGGGTCGTTTTGGGACAGATGAGTCCACTTTCAGCTACGTCCTGGCCTCCAGAAATTACCTGCAGCTCCAGGCCACCTTCAAGATATATGAGCAGCTTTCTGGAACTGAAATTCTGGATGCCATTGAGAATGAGACTTCtgggacactgaagaaatgCTACATTGCTCTTGTGAGAGTTGCTAAGAACCCGCAGCTGTACTTTGCCAGACGTTTGCACGACGCAATGAAAGGAGCGGGCACTGACGAGGACACCCTTATTCGCATCATTGTGTGTCGCTCTGAGTACGATTTGGAGACCATCAAAGACATGTACCTGGAGAAGTACGATGTGTCTCTGAAGGAAGCCCTGAAGGACGAGTGCAGCGGGGACTTTAAGCGCCTCCTCCTGGCCATCTGCCACTGAAAGTCTGTTAAGAGCAGGGCGGATGTGGACGACAGCGGCAGAGACAGCATGTATGTTTATACTGAGGGTGCTGCTGTTTTCTGTCTAATAAACTAATACTACACAGTCTCTCTATGTGACATTATGTAGAAAGCAGGAGGGTGGAAGTGATAGAACAATTAACCTGGCCCATGTCAAAATCTGAGTTACTGTGAATTCGGGTGGCtctctttttaaactttttccACAGGCATTAATTACAAAAGTTCCCAACGAACTAGATTTACTCattttttctgtgtctgtcaaTGACTGCCCATTTCTTAGTCAATTTTTAGCTCCAGTCCTTAACACCTTTACCAGCATTTTTACACAGTGATATGTAAGTTTAAGTCACTGTAAACAAGCACCAAAATGAATACATTCCCAGGAGCTGACTGTAGTCACACTGATGGAATTACTGTGAGTGTGTAAATTAATTCCAGTGGTGTGAGGCTTGATAGGATAATCACATTGTAAACCTGTTTGTATACTGGGAAAAATCAGCCATGGCCTCAGTATGTCTCTGCTGCTGATTATTACCATCGTAACCAAGTATTAATACTGTTTTAGATCAAATAGCTATGTATTCATATATGCTTCTTTCTATATCTTTCACCCTCCATGCCCCAAACTCAGTGACTGTTATACTTCACTGCTGTTATAACCAATGCAATCACTCCATGTGGCTTGAAACGTGTGCGTTTAAATGAAGGAATGTGAAAGTTTAAATTGAAGGAATCTTAGCTGGTATCATGAAGGATATGCAATGTTATGTGAATGGATTTGTATGAAACGCAGAAGAGAATATATTTTTCATCAGTTGCTTATTGAAAGATACTTTATATtgatttacagtacatgttgCATTTGTATCTTCTACTACAATTAGATAAACTTGACAAATCCAAATACACCTCACCTTGttatatatgtatttcttttgtattttaCAACTAACACAGTAGAgtgtttaatatatataatttagttTACTGTTCTAGGTAGGCCAGAGGGTATATGAGAAGAAACATTTAACATCTAGGTAGTCTGATGTcatttgtgtgtctctataagGCAGCTGAGATTTGTTAAAAGTACCACTATTGTAAACATTTTTGCAACAAGCTGAACTGCACTACACGAGATAGTTAGAACAAATCAACCAAAACATCAGTTGGAGTTATCAGTGGGACTAGTATTTCTCTCTCTAGCCAAAGAATTTTATTCTACCTGCAAATAAAGTTCTCTTTAACCTCA
>XM_039790300.1
GGTGACGTCACATGCTGCCTGCTTTGGGCccgtagactttttttttttgggccgcAGCTTGTACCAGGAGGACAAGTATCCCAAACTAGGACTTTTTCTCCAACAGATCACCAGCCGCAGCCGGAAAACACATCCTCAAAATGGGCAACTGTCAACCCACTATCGTGCACTATGAGGATTTTGATGTCGTGGCTGACATTAAGGCCATCCGTAAAGCCTGCAAAGGGTTTGGAACTGATGAGCAGGCCATCATTGACATCCTGGCAAACCGTAGCGCAGCTCAGCGTCAGGAAATTAAATATGCCTATTTTGAAAAGTATGATGATTTGGTggatgttttgaaaaaagaattGTCTGGGAGCTTTGAGAACGCCATCCTTGCCATGCTGGACCCGCCCGTCGTCTTCGCTGTGAAGGAGCTGAGGAAGGCCATGAAGGGAGCAGGCACTGATGAAGACGTCCTGGTGGAGATCCTGTGCACCGCCACCAACGCTGACATTGCCATGTTCAAGGAATGCTACTTTCAAGTGCATGAGCGTGACCTTGAAGCAGATATTGAGGGAGACACAAGCGGGGATGTAAGGAATCTGCTGACGGCTCTATTGCAGGGCAACAGAGATGAGAGTTACGAGGTGGATGAGGAATTGGCTGAACAAGATGCTACCTGCCTGTTTGAGGCTGGAGAGGGTCGTTTTGGGACAGATGAGTCCACTTTCAGCTACGTCCTGGCCTCCAGAAATTACCTGCAGCTCCAGGCCACCTTCAAGATATATGAGCAGCTTTCTGGAACTGAAATTCTGGATGCCATTGAGAATGAGACTTCtgggacactgaagaaatgCTACATTGCTCTTGTGAGAGTTGCTAAGAACCCGCAGCTGTACTTTGCCAGACGTTTGCACGACGCAATGAAAGGAGCGGGCACTGACGAGGACACCCTTATTCGCATCATTGTGTGTCGCTCTGAGTACGATTTGGAGACCATCAAAGACATGTACCTGGAGAAGTACGATGTGTCTCTGAAGGAAGCCCTGAAGGACGAGTGCAGCGGGGACTTTAAGCGCCTCCTCCTGGCCATCTGCCACTGAAAGTCTGTTAAGAGCAGGGCGGATGTGGACGACAGCGGCAGAGACAGCATGTATGTTTATACTGAGGGTGCTGCTGTTTTCTGTCTAATAAACTAATACTACACAGTCTCTCTATGTGACATTATGTAGAAAGCAGGAGGGTGGAAGTGATAGAACAATTAACCTGGCCCATGTCAAAATCTGAGTTACTGTGAATTCGGGTGGCtctctttttaaactttttccACAGGCATTAATTACAAAAGTTCCCAACGAACTAGATTTACTCattttttctgtgtctgtcaaTGACTGCCCATTTCTTAGTCAATTTTTAGCTCCAGTCCTTAACACCTTTACCAGCATTTTTACACAGTGATATGTAAGTTTAAGTCACTGTAAACAAGCACCAAAATGAATACATTCCCAGGAGCTGACTGTAGTCACACTGATGGAATTACTGTGAGTGTGTAAATTAATTCCAGTGGTGTGAGGCTTGATAGGATAATCACATTGTAAACCTGTTTGTATACTGGGAAAAATCAGCCATGGCCTCAGTATGTCTCTGCTGCTGATTATTACCATCGTAACCAAGTATTAATACTGTTTTAGATCAAATAGCTATGTATTCATATATGCTTCTTTCTATATCTTTCACCCTCCATGCCCCAAACTCAGTGACTGTTATACTTCACTGCTGTTATAACCAATGCAATCACTCCATGTGGCTTGAAACGTGTGCGTTTAAATGAAGGAATGTGAAAGTTTAAATTGAAGGAATCTTAGCTGGTATCATGAAGGATATGCAATGTTATGTGAATGGATTTGTATGAAACGCAGAAGAGAATATATTTTTCATCAGTTGCTTATTGAAAGATACTTTATATtgatttacagtacatgttgCATTTGTATCTTCTACTACAATTAGATAAACTTGACAAATCCAAATACACCTCACCTTGttatatatgtatttcttttgtattttaCAACTAACACAGTAGAgtgtttaatatatataatttagttTACTGTTCTAGGTAGGCCAGAGGGTATATGAGAAGAAACATTTAACATCTAGGTAGTCTGATGTcatttgtgtgtctctataagGCAGCTGAGATTTGTTAAAAGTACCACTATTGTAAACATTTTTGCAACAAGCTGAACTGCACTACACGAGATAGTTAGAACAAATCAACCAAAACATCAGTTGGAGTTATCAGTGGGACTAGTATTTCTCTCTCTAGCCAAAGAATTTTATTCTACCTGCAAATAAAGTTCTCTTTAACCTCA
Function
NR:
description |
PREDICTED: annexin A13-like |
GO:
id |
name |
namespace |
GO:0005509
|
calcium ion binding |
molecular_function |
GO:0005544
|
calcium-dependent phospholipid binding |
molecular_function |
KEGG:
id |
description |
K17099
|
ANXA13; annexin A13 |
RNA
RNA id |
representative |
length |
rna type |
GC content |
exon number |
start site |
end site |
XM_039790299.1 |
True |
2369 |
mRNA |
0.43 |
11 |
21575606 |
21587153 |
XM_039790300.1 |
False |
2366 |
mRNA |
0.43 |
11 |
21575606 |
21587153 |
Neighbor
gene id |
symbol |
gene type |
direction |
distance |
location |
LOC120551882 |
LOC104933965,LOC103370911,LOC101468576,LOC102294681
|
coding |
downstream |
1096 |
21564869 ~ 21574510 (-) |
myo3a |
myo3a
|
coding |
downstream |
30156 |
21485222 ~ 21545450 (-) |
gad2 |
gad2
|
coding |
downstream |
91432 |
21464099 ~ 21484174 (-) |
LOC120552736 |
apbb1ip
|
coding |
downstream |
133030 |
21413132 ~ 21442576 (-) |
pdss1 |
pdss1
|
coding |
downstream |
181990 |
21386640 ~ 21393616 (-) |
LOC120552336 |
NA
|
coding |
upstream |
3791 |
21590944 ~ 21598756 (-) |
gpr158a |
gpr158
|
coding |
upstream |
17562 |
21604715 ~ 21689934 (-) |
ptchd3a |
NA
|
coding |
upstream |
106278 |
21693431 ~ 21700043 (-) |
LOC120552272 |
thnsl1
|
coding |
upstream |
119752 |
21706905 ~ 21711616 (-) |
LOC120552274 |
NA
|
coding |
upstream |
129394 |
21716547 ~ 21719505 (-) |
G221616 |
NA
|
non-coding |
downstream |
157599 |
21415951 ~ 21418007 (-) |
G221604 |
abi1
|
non-coding |
downstream |
202915 |
21345698 ~ 21372691 (-) |
G221582 |
NA
|
non-coding |
downstream |
255196 |
21319890 ~ 21320410 (-) |
G221567 |
NA
|
non-coding |
downstream |
273559 |
21301484 ~ 21302047 (-) |
G221551 |
NA
|
non-coding |
downstream |
305197 |
21269442 ~ 21270409 (-) |
G221695 |
NA
|
non-coding |
upstream |
144134 |
21731287 ~ 21731487 (-) |
G221708 |
arhgap21
|
non-coding |
upstream |
227343 |
21814496 ~ 21815723 (-) |
G221712 |
LOC104936438,LOC103366385
|
non-coding |
upstream |
245003 |
21832156 ~ 21832884 (-) |
G221768 |
NA
|
non-coding |
upstream |
357217 |
21944370 ~ 21944690 (-) |
G221793 |
NA
|
non-coding |
upstream |
504388 |
22091541 ~ 22091753 (-) |
rbis |
LOC101064519,LOC103367294,LOC102312013
|
other |
downstream |
353939 |
21217680 ~ 21221667 (-) |
LOC120552536 |
fbxl7
|
other |
downstream |
712918 |
20835178 ~ 20862688 (-) |
G221048 |
ankh
|
other |
downstream |
2248712 |
19315591 ~ 19326894 (-) |
mettl4 |
mettl4
|
other |
downstream |
2626111 |
18938913 ~ 18949495 (-) |
LOC120552352 |
colec12,LOC102798044
|
other |
downstream |
2764662 |
18772977 ~ 18810944 (-) |
tfr1b |
NA
|
other |
upstream |
402864 |
21990017 ~ 22011086 (-) |
LOC120552473 |
NA
|
other |
upstream |
527229 |
22114382 ~ 22120611 (-) |
smpx |
smpx
|
other |
upstream |
615614 |
22202767 ~ 22218381 (-) |
LOC120552322 |
cdh12,LOC108234660,LOC100695194,LOC101477368
|
other |
upstream |
1814390 |
23401543 ~ 23519526 (-) |
avl9 |
avl9
|
other |
upstream |
3209436 |
24796589 ~ 24854888 (-) |
Expression