LOC120552336


Basic Information

Item Value
gene id LOC120552336
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 21590944 ~ 21598756 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790301.1
TCATCATTCTgctgattttaaatgtttacaaACTTTCACCGCTCGCAGTCAGTCTGCTCGAACCATCACATCAACGGGCAGGAGAAATGTGGAGGTGAAAAGTGAGGAGTCCAGCAGTGAGAGGGTTGAGTTGACCGTGGGGGGGAAAACATCCAAACCCAAAATGTTGTTCGAGCTTTCTTCTGGCTCGTGTGAGGACGGTGAAGCCTTCGGGTGCAGAAATGGCCTTTTTGAATCACCATCACCACTCCGTCTTTCACCAGCGACTGCGGCAGCACAAACACAGATGCCAAGCGCCAAGCCCAAGGCCAGGACGCTGGTAGCATGCAGGCAGCTGACTGATGGGAACGAGGCGGCCTCTCTCAAGGACCAATCTCCTCTGCCGTTACTAACACTCACAGGGACTGTAAGTCTGGCAAGCACTGACCCCAGGAGGCCCTCTTCAGTCCATGCATCCATCACTGGAAGAGCTTCAGTATCAGCTGCTCAACGGCAAGAAGCCCAAAGATTAAACGGGAGGTCGGCTAGCATCACCAGAGAGgaaaaaaaaagccagtATTACAGAGACCTTAGCCGGCAggtagaggagaggaaacagcagTTGGAAAGGGAGAGAAGTAGAAATGCTGTTGAAGAACAAAAGCACATTGACACCATGCGGCACAGCATCTGGGGGATGCCAGGATGTGGCGCCCCAAACTACCACCTGGGCACAGTGAAACGGACCAAAAGCCTCGGCAACGCCGGGATTTTACCCCAGGAGCAGACCCGTGATAAAGTCTTCAGTGGGACCCCCTTCCACCGCCTGTGAAATGAAGACCATAACATCCCCTAGCCGAGACCACTGAGAGCTACGGAGCAGCCAGGCAAATAACACTCTCTGACTTTTGTCTTCAAGAAATGTTAGCTTTGCAGCCATagagatatttgggctgtttCAGCAGCAAATTCTGATGGTGGCAAAGAATTACAGAATGTCAATAAACTCAGACTGAGAGAACAGAAA

Function

GO:

id name namespace
GO:0022412 cellular process involved in reproduction in multicellular organism biological_process
GO:0019538 protein metabolic process biological_process
GO:0007281 germ cell development biological_process
GO:0006508 proteolysis biological_process
GO:0003006 developmental process involved in reproduction biological_process

KEGG:

id description
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption
ko05164 Influenza A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790301.1 True 1006 mRNA 0.51 9 21590944 21598756

Neighbor

gene id symbol gene type direction distance location
anxa13 LOC107081825,LOC103456771,LOC105935762,LOC106515547,LOC103140553,LOC103370912 coding downstream 3791 21575606 ~ 21587153 (-)
LOC120551882 LOC104933965,LOC103370911,LOC101468576,LOC102294681 coding downstream 16434 21564869 ~ 21574510 (-)
myo3a myo3a coding downstream 45494 21485222 ~ 21545450 (-)
gad2 gad2 coding downstream 106770 21464099 ~ 21484174 (-)
LOC120552736 apbb1ip coding downstream 148368 21413132 ~ 21442576 (-)
gpr158a gpr158 coding upstream 5959 21604715 ~ 21689934 (-)
ptchd3a NA coding upstream 94675 21693431 ~ 21700043 (-)
LOC120552272 thnsl1 coding upstream 108149 21706905 ~ 21711616 (-)
LOC120552274 NA coding upstream 117791 21716547 ~ 21719505 (-)
tmtopsb LOC100702425,LOC101487167,LOC102300731,LOC104945569,LOC102206266,LOC103366381 coding upstream 277408 21876164 ~ 21917655 (-)
G221616 NA non-coding downstream 172937 21415951 ~ 21418007 (-)
G221604 abi1 non-coding downstream 218253 21345698 ~ 21372691 (-)
G221582 NA non-coding downstream 270534 21319890 ~ 21320410 (-)
G221567 NA non-coding downstream 288897 21301484 ~ 21302047 (-)
G221551 NA non-coding downstream 320535 21269442 ~ 21270409 (-)
G221695 NA non-coding upstream 132531 21731287 ~ 21731487 (-)
G221708 arhgap21 non-coding upstream 215740 21814496 ~ 21815723 (-)
G221712 LOC104936438,LOC103366385 non-coding upstream 233400 21832156 ~ 21832884 (-)
G221768 NA non-coding upstream 345614 21944370 ~ 21944690 (-)
G221793 NA non-coding upstream 492785 22091541 ~ 22091753 (-)
rbis LOC101064519,LOC103367294,LOC102312013 other downstream 369277 21217680 ~ 21221667 (-)
LOC120552536 fbxl7 other downstream 728256 20835178 ~ 20862688 (-)
G221048 ankh other downstream 2264050 19315591 ~ 19326894 (-)
mettl4 mettl4 other downstream 2641449 18938913 ~ 18949495 (-)
LOC120552352 colec12,LOC102798044 other downstream 2780000 18772977 ~ 18810944 (-)
tfr1b NA other upstream 391261 21990017 ~ 22011086 (-)
LOC120552473 NA other upstream 515626 22114382 ~ 22120611 (-)
smpx smpx other upstream 604011 22202767 ~ 22218381 (-)
LOC120552322 cdh12,LOC108234660,LOC100695194,LOC101477368 other upstream 1802787 23401543 ~ 23519526 (-)
avl9 avl9 other upstream 3197833 24796589 ~ 24854888 (-)

Expression


Co-expression Network