snx7 (snx7)


Basic Information

Item Value
gene id snx7
gene name snx7
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 4899955 ~ 4954979 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790331.1
TGTCGCTCGCCTCTCGGTGTCTTTCCGCCGCTCTGAGTCTGAAGTTGTGCTTGAAGTTTACCTTTTACGTTTGCCCCGATGAGCTCAGTCGGTTTCAACAGTTTGGAAGTATAAGATGAGCGGACAGACGGTCCCCGCGGACTTCTCGGGACACATGCTGGACCTGGACGAGGACGAAGACCTGGAGGTTTTCAGCAAGAACACGTCCCTTGCTGATGGAAGTCCCATGCCCAACTCTCCCAGCTCCATGGTCAACCAGTACagactggaggaggaggaggaggaggagcagcaggacgccAATGCCAGAGACCTCTTCGTCAGCGTTGATAACCCAGAGAGCCATGTCACTGCCATCGAAACCTTCATCATGTACAGAGTGGTGACCAAGACCACGCGGAGCGAGTTTGATTCCAGTGAGTTCGAGGTGCGCCGGCGCTACCAGGACTTCCTGTGGCTCCGAAGCAGACTGGAGGAAAACCACCCGACACTCATTGTCCACCCGCTGCCGGAGAAGTTTGTGATGAAAGGCATGGTGGAGCGCTTCAACGACGACTTCATCGAGACCAGGAGGAAAGCCCTGCACCGCTTCCTCAACAAGATCTCGGTGCACCCCATACTGTCTTACAGCCAGCACTTCAAAGTCTTCCTCACTGCAGagGATTTGATGTCTCACAGGAAGCAGGGTCCGGGCTTCCTGAGCAGGATGGGGGAGACGGTGAGGGCGGTGGCCAACTCGGTACGAGGCCTGAGGAGCCGGCCGGAGGAGTTCACGCTGATGCAGGAGTATGTGGACGACTTCAGTAACAAGATCTGCTCTGTGGACAAAGTCACTCAGCGGATCATCAAGGAACAGAGAGAGTATTTGGACGAGCTGAAGCAGTACAGCCCCACCTACAGCCAGTGGGCGGGGTTGGAGGAGGAGCTGGCCGAGCCGCTGAGGGGCGTGGCCAGCTGTGTGGAGCGTTGCGGTCTGGAAACAGAGGAGCAGATCCAGCATCTGTCTCAAGTGCTCGTCCCCGCTCTGCACGAGTACGTCCTCTGCGCCGAGACCCTGAAGGCTGTTATGAGACGGAGAGACAACATCCAGGCGGAGTTTGAAGCCAAGAACGAGGCCCTGGCATCCAGAAGAGTGGACCAAGAAGCACTGCAGGACGAGGTGGACGGTCTGGCGGACCGCGTGGAGCTGGCCAACAACGCCTTGAAGGGGGACTGGTCCCGCTGGCAGAACAGCATGAGAACTGACCTCAAGTCAGCCTTTCTATCCACGGCCGAGAAGAACGTGGAGTACTACGAGCAGTGCCTGGCTGTGTGGGAGTCGTTCCTCCTGTCTCAGAGAGCGGAGCCCAGCGAGCAGAATGATGGGGAAGATGCCTCTTAAAGTGTTTAGATGATCGAAACGCCTTTCCAGCAGactctgttgtctctccagCACAACCAAATATAGACTTTGAACCAATGTCCACATATGCCAACAGGCTCCGCctctctttcattctttctttctttctttctgtctgtctgtctgtctgtctggccaaAGAAGTTAATCCAAACCAGCCATTCCAGTGATGATGGTGCATCACTAATACCAACACTGTGATCCAAATATCCACATGTTAAGGTTTACACTCCCTCTTTGTGCATTGCCAAAAGTTAAAAGAAGACTCCTGGCTCTTCTGTCCAATATTAAGGTGGATTAGTATGGCTGTACACCACACAGGCTCTGATTGGTCGGGATCCAGCATGAAGTCCGCCATGTGTTTTGGCCAAGTCACAGCTAGAATTTTTTTATCTAATCTGACAGTGACCTTGGCACAAATAAATTATCAATCTgtcttaataataatagtaatttaACATGCACGCCTTTGACTGAAAGCAAGTTCAGGTCTTGCATCTATACTGTGTGTTCTCATTTATTTACTAATGAAGAATCAGCCAGTGCAGATTTATGTAAAGAGTGTACACTGAAAAGTAAAattataaaatgtcatcacaaGAAATGCATTGAACATCTACATCCATCTAAAGCTAGAGTTTTCCTTTCAGAATGCTCTCAGTAACAGTACCATTGATCTCCCGGTGCACTTTGAGCAGAGAAGCCTTAAATGATCTTGTTGTTTGGGCCGATAGAGATTTCACGTTTACACGAAGACCAGCTACAATGTCTTTGTAACAGAATGCTCAAAATAATCTTGTAatactgatcttttttttttttcttctcttttttgcttttatcattgattatgtaaaaaaaaaaaagg

Function

symbol description
snx7 Enables cysteine-type endopeptidase activity involved in apoptotic process. Acts upstream of or within liver development and negative regulation of apoptotic process. Is expressed in gut and liver. Orthologous to human SNX7 (sorting nexin 7).

NR:

description
sorting nexin-7 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790331.1 True 2270 mRNA 0.50 9 4899955 4954979

Neighbor

gene id symbol gene type direction distance location
trnas-gcu_51 NA coding downstream 30350 4869524 ~ 4869605 (-)
trnas-gcu_50 NA coding downstream 31785 4868089 ~ 4868170 (-)
trnas-gcu_49 NA coding downstream 33411 4866465 ~ 4866544 (-)
trnaa-agc_29 NA coding downstream 53721 4846162 ~ 4846234 (-)
trnaa-agc_28 NA coding downstream 61892 4837991 ~ 4838063 (-)
LOC120552519 LOC104935677,LOC103364245 coding upstream 769256 5724235 ~ 5729256 (-)
LOC120552212 LOC102200884,LOC107389439,LOC103367775 coding upstream 892462 5847441 ~ 5848397 (-)
LOC120552249 hecw1 coding upstream 1016215 5971194 ~ 6064050 (-)
bambia bambi,LOC102792619 coding upstream 1280876 6235855 ~ 6240971 (-)
waca wac coding upstream 1292443 6247422 ~ 6277304 (-)
G217992 NA non-coding downstream 2490 4897243 ~ 4897465 (-)
G217989 NA non-coding downstream 8464 4891018 ~ 4891491 (-)
G217988 NA non-coding downstream 9427 4890312 ~ 4890528 (-)
G217977 NA non-coding downstream 113337 4786393 ~ 4786618 (-)
G217976 NA non-coding downstream 137686 4760265 ~ 4762269 (-)
G218051 NA non-coding upstream 601927 5556906 ~ 5557610 (-)
LOC120552525 NA non-coding upstream 643250 5598229 ~ 5606091 (-)
LOC120552435 NA non-coding upstream 685016 5639995 ~ 5655806 (-)
G218088 NA non-coding upstream 834200 5789179 ~ 5789505 (-)
G218089 reck non-coding upstream 835784 5790763 ~ 5791025 (-)
G217837 NA other downstream 958626 3936010 ~ 3941329 (-)
G217780 chchd7,LOC102799933 other downstream 1195598 3692952 ~ 3704357 (-)
f3a NA other downstream 1443911 3437802 ~ 3456044 (-)
LOC120552696 NA other downstream 1556250 3315418 ~ 3343705 (-)
svila svil other downstream 1763741 2988926 ~ 3136214 (-)
G218019 NA other upstream 72526 5027505 ~ 5036704 (-)
G218085 LOC107687935 other upstream 745250 5700229 ~ 5700576 (-)
G218453 adarb2 other upstream 3239950 8194929 ~ 8195879 (-)
G218471 NA other upstream 3475485 8430464 ~ 8430930 (-)
prkdc prkdc other upstream 3842802 8797781 ~ 8851726 (-)

Expression


Co-expression Network