LOC120552381 (LOC104957866)


Basic Information

Item Value
gene id LOC120552381
gene name LOC104957866
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 16879495 ~ 16881724 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790405.1
ATCTCAAACTGATATAAATACCGGTAGTTAAACAGCATCTGGTCCTCAGTGTTCCAACATGATTTGGCTTGTGGCTTGCCTGTCCTGCATTGGGCTGATTTGTGctgaaacacccttcaaccataaTGTCCACAACGAGAGGGTCATAGGAGGCCACGATGCTAAACCCAACACCTGGAAATGGCAGGTTTCTCTCCAGTATGATTCATACAATGATGGTTATTTCGCCCACATCTGTGGAGGCACTATCATTAGTAGTTTCTACATTATGACTGCAGCTCACTGTATCCTCAGCATGCATGCTAGTCTGTACCGTGTGGTGGTGGGTGAGTACAACCTGTATGAGTATGAAGGCAGCGAGCAGTTCATCCGTGTGGAAATGATTGATGTCCATCCTGGCTGGACTGAAGACCTTAGCAAAGGAAATGATATTGCTCTCTTGAGACTGGCTAATCCTGTGAATGACAACGGCTATGTGGCCATTGCCAACCTTCCCTACCCTTACGAGACGCTGCCTCATGAGTTCACCTGTTACATCACTGGCTGGGGACTCATGGACTACGTAGGGAGCATCCCTACCATCCTGCAGGTGGCTCCCATCTCGGTGGTGGAGCATTCAGTCTGCTCCCAGCCTAACTGGTGGGGCAGCAATGCTTTGGAAACCATGGTGTGTGCTGGAGGGGATGGAGTCATATCAGGCTGCCAGGGCGACTCCGGAGGTCCCCTGAACTGCTTCACACATGGAGCCTGGACGGTCCATGGTGTTGTCAGTTACGGTCCATCTGGCGAGTGCAACCAAGTGACTAAACCCACTGTCTTCACCAGAGTCTCTTCCTTCGAAGACTGGATCTTTTCAataGTCCAATAGGTGGCACAGTGTATTCTGTCAAATGGAACctgtgaaataaaatgtatttgcatctcatt

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: chymotrypsin-like elastase family member 2B, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790405.1 True 927 mRNA 0.49 8 16879495 16881724

Neighbor

gene id symbol gene type direction distance location
plcd1a NA coding downstream 257814 16601629 ~ 16621681 (-)
LOC120551893 LOC103377216,LOC107591252,LOC101472906,LOC100709944 coding downstream 344697 16527664 ~ 16534798 (-)
hhatlb hhatl coding downstream 352445 16519042 ~ 16527050 (-)
klhl40b klhl40 coding downstream 361557 16514192 ~ 16517938 (-)
sec22c sec22c coding downstream 415479 16458333 ~ 16464016 (-)
bdh1 bdh1,LOC103373205,LOC107382809 coding upstream 68931 16950655 ~ 16965739 (-)
gyg1b gyg1 coding upstream 84921 16966645 ~ 16977681 (-)
cpb1 cpb1 coding upstream 98200 16979924 ~ 16987685 (-)
agtr1b agtr1 coding upstream 106085 16987809 ~ 16994577 (-)
zic1 zic1 coding upstream 214527 17096251 ~ 17099679 (-)
G220382 NA non-coding downstream 134083 16742287 ~ 16745412 (-)
G220373 NA non-coding downstream 177938 16694587 ~ 16701557 (-)
G220300 gars,LOC103369121 non-coding downstream 330771 16546928 ~ 16548724 (-)
G220273 NA non-coding downstream 398337 16479383 ~ 16481158 (-)
G220272 nktr,LOC102798446 non-coding downstream 401980 16472248 ~ 16477515 (-)
G220443 NA non-coding upstream 5532 16887256 ~ 16888024 (-)
G220445 NA non-coding upstream 16465 16898189 ~ 16898537 (-)
LOC120551964 NA non-coding upstream 233506 17115230 ~ 17398235 (-)
G220488 NA non-coding upstream 316667 17198391 ~ 17201334 (-)
G220611 NA non-coding upstream 670036 17551760 ~ 17552963 (-)
G220412 csrnp1,LOC104937158,LOC102793366 other downstream 4195 16874649 ~ 16875300 (-)
LOC120552205 LOC100711537,LOC102295084,LOC108230444,LOC106948898,LOC103140410 other downstream 84371 16782072 ~ 16795124 (-)
drd3 drd3 other downstream 594760 16266303 ~ 16284735 (-)
G220124 NA other downstream 814274 16064670 ~ 16065221 (-)
G220117 usp12,LOC107701680,LOC107705210 other downstream 874731 16003879 ~ 16004764 (-)
si:ch73-174h16.4 LOC103364270,LOC104947970 other upstream 1545038 18426762 ~ 18483776 (-)
G220833 NA other upstream 1728512 18610236 ~ 18697970 (-)
LOC120552352 colec12,LOC102798044 other upstream 1891253 18772977 ~ 18810944 (-)
mettl4 mettl4 other upstream 2057189 18938913 ~ 18949495 (-)
G221048 ankh other upstream 2433867 19315591 ~ 19326894 (-)

Expression


Co-expression Network