idi1 (idi1,LOC102791572)


Basic Information

Item Value
gene id idi1
gene name idi1,LOC102791572
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 8326552 ~ 8333498 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790471.1
ACTCATGCTTAGGTATCCAATGAAAAACCGTGACCTCAGAAGCAGGGAGCGAAAGCTAGGTGGTTCAGTTTTCTGCTCTAAAATATCGTCGGGAGCAAACGCAAAATACGAGTTTTACCAACTTGAAACCGGACAATTGCATTGCGATGGTGCGGGGCGTGTGGGCGGTGCTTCGGATGGTGTCCTGCGAGGGAGCCGCTGTGCTGAAATCAAACGTACCTGGCGCTGGCAGAGTTGCTGCACCGCGACACAGATCTATTTACACACCTATTACTTCCTACTGCAGAGCTATAGCAAGTGAGGTAAGACAGTCTGCGGTCAGAATGCCCAAGATAACCACAGATCACCTGGACGAGAAGCAGGTACAGCTGCTGTCCGAGATGTGCATCCTCATCGACGAGAACGACCACAAGATTGGAGCGGACACCAAGAAAAACTGCCACCTCAACTCCAACATTGACAACGGTTTATTACACCGGGCTTTCAGCGTGTTCATTTTCAACAGTGAGGAGAAGCTGCTCTTACAGCAGAGATCTGATGCCAAAATCACTTTTCCAGgCTGTTTCACAAACACATGTTGCAGTCACCCTTTACACACAGAGAGTGAGCTGGAGGAGAAGGAAGCAATAGGAGTGAGGAGAGCTGCTCAGAGGAGACTCAAAGCTGAACTGGGTATCCCCATGGATCAGGTGACCCCAGATGAGATGACGTACCTGACAAGGATCCACTACAAGGCCCAGTCAGACGGTGTGTGGGGAGAACATGAGATTGACTACATCCTCTTCATGCAGAAGGACGTGGAGTTGAATCCAGACCCCAATGAGATTAAAAGCCACTGCTATGTGAGCaaggaggagatgaaggagaTGTTAGAGAAGGCCAAGCGCAAAGAACTGGAGATCACACCCTGGTTCAGTCTCATTGCAGAGACCTTCCTGTTCCAGTGGTGGGACAACCTGCAAAACCTCAAGCAGTTCATGGATCACAACAATATCCACCGCATGTAACCAAAACCAGGTTGGGCTCTACCTTCAGTCATTTCAAACCTGTCAGTTAAGCTGCTAGAGACCCCTGACGCTCTGAGGTGCATTCATCTACACATGAGGAGGGCTGTTAGGGTGACTCCCAGTATTTATGTAGTATTAAGAAAACATATACATCAGGTAGTCTGATAAGATGCACGCTAAAGACATTCAACATCTTATTTTATTAGGAAGAAAAATGCAATCTTGTTATTAACAACTTAATGAAGAGAATAGcctatttttatataaaaacttaaagtgcCTGAATACAGGTCACTAGGTTAAGAAGAATAGTGTCTCCAAGTAATGAGGTGATGTCACAACAACTACTGTCAATTTTCTATATTGTCGACAATATCTGTGAACAAGCTTTGTCTTTGCACTCTTTTACACAATAAAGTGTTTGATTGTTGTCATTggaaa
>XM_039790472.1
ATGCTTAGGTATCCAATGAAAAACCGTGACCTCAGAAGCAGGGAGCGAAAGCTAGGTGGTTCAGTTTTCTGCTCTAAAATATCGTCGGGAGCAAACGCAAAATACGAGTTTTACCAACTTGAAACCGGACAATTGCATTTGAGGTAAGACAGTCTGCGGTCAGAATGCCCAAGATAACCACAGATCACCTGGACGAGAAGCAGGTACAGCTGCTGTCCGAGATGTGCATCCTCATCGACGAGAACGACCACAAGATTGGAGCGGACACCAAGAAAAACTGCCACCTCAACTCCAACATTGACAACGGTTTATTACACCGGGCTTTCAGCGTGTTCATTTTCAACAGTGAGGAGAAGCTGCTCTTACAGCAGAGATCTGATGCCAAAATCACTTTTCCAGgCTGTTTCACAAACACATGTTGCAGTCACCCTTTACACACAGAGAGTGAGCTGGAGGAGAAGGAAGCAATAGGAGTGAGGAGAGCTGCTCAGAGGAGACTCAAAGCTGAACTGGGTATCCCCATGGATCAGGTGACCCCAGATGAGATGACGTACCTGACAAGGATCCACTACAAGGCCCAGTCAGACGGTGTGTGGGGAGAACATGAGATTGACTACATCCTCTTCATGCAGAAGGACGTGGAGTTGAATCCAGACCCCAATGAGATTAAAAGCCACTGCTATGTGAGCaaggaggagatgaaggagaTGTTAGAGAAGGCCAAGCGCAAAGAACTGGAGATCACACCCTGGTTCAGTCTCATTGCAGAGACCTTCCTGTTCCAGTGGTGGGACAACCTGCAAAACCTCAAGCAGTTCATGGATCACAACAATATCCACCGCATGTAACCAAAACCAGGTTGGGCTCTACCTTCAGTCATTTCAAACCTGTCAGTTAAGCTGCTAGAGACCCCTGACGCTCTGAGGTGCATTCATCTACACATGAGGAGGGCTGTTAGGGTGACTCCCAGTATTTATGTAGTATTAAGAAAACATATACATCAGGTAGTCTGATAAGATGCACGCTAAAGACATTCAACATCTTATTTTATTAGGAAGAAAAATGCAATCTTGTTATTAACAACTTAATGAAGAGAATAGcctatttttatataaaaacttaaagtgcCTGAATACAGGTCACTAGGTTAAGAAGAATAGTGTCTCCAAGTAATGAGGTGATGTCACAACAACTACTGTCAATTTTCTATATTGTCGACAATATCTGTGAACAAGCTTTGTCTTTGCACTCTTTTACACAATAAAGTGTTTGATTGTTGTCATTggaaa
>XM_039790473.1
CTCTACTGACTGTCTCTTTGTGAGGTAAGACAGTCTGCGGTCAGAATGCCCAAGATAACCACAGATCACCTGGACGAGAAGCAGGTACAGCTGCTGTCCGAGATGTGCATCCTCATCGACGAGAACGACCACAAGATTGGAGCGGACACCAAGAAAAACTGCCACCTCAACTCCAACATTGACAACGGTTTATTACACCGGGCTTTCAGCGTGTTCATTTTCAACAGTGAGGAGAAGCTGCTCTTACAGCAGAGATCTGATGCCAAAATCACTTTTCCAGgCTGTTTCACAAACACATGTTGCAGTCACCCTTTACACACAGAGAGTGAGCTGGAGGAGAAGGAAGCAATAGGAGTGAGGAGAGCTGCTCAGAGGAGACTCAAAGCTGAACTGGGTATCCCCATGGATCAGGTGACCCCAGATGAGATGACGTACCTGACAAGGATCCACTACAAGGCCCAGTCAGACGGTGTGTGGGGAGAACATGAGATTGACTACATCCTCTTCATGCAGAAGGACGTGGAGTTGAATCCAGACCCCAATGAGATTAAAAGCCACTGCTATGTGAGCaaggaggagatgaaggagaTGTTAGAGAAGGCCAAGCGCAAAGAACTGGAGATCACACCCTGGTTCAGTCTCATTGCAGAGACCTTCCTGTTCCAGTGGTGGGACAACCTGCAAAACCTCAAGCAGTTCATGGATCACAACAATATCCACCGCATGTAACCAAAACCAGGTTGGGCTCTACCTTCAGTCATTTCAAACCTGTCAGTTAAGCTGCTAGAGACCCCTGACGCTCTGAGGTGCATTCATCTACACATGAGGAGGGCTGTTAGGGTGACTCCCAGTATTTATGTAGTATTAAGAAAACATATACATCAGGTAGTCTGATAAGATGCACGCTAAAGACATTCAACATCTTATTTTATTAGGAAGAAAAATGCAATCTTGTTATTAACAACTTAATGAAGAGAATAGcctatttttatataaaaacttaaagtgcCTGAATACAGGTCACTAGGTTAAGAAGAATAGTGTCTCCAAGTAATGAGGTGATGTCACAACAACTACTGTCAATTTTCTATATTGTCGACAATATCTGTGAACAAGCTTTGTCTTTGCACTCTTTTACACAATAAAGTGTTTGATTGTTGTCATTggaaa

Function

symbol description
idi1 Predicted to enable isopentenyl-diphosphate delta-isomerase activity. Predicted to be involved in isopentenyl diphosphate biosynthetic process. Predicted to act upstream of or within isoprenoid biosynthetic process. Predicted to be active in cytoplasm. Orthologous to several human genes including IDI1 (isopentenyl-diphosphate delta isomerase 1).

NR:

description
isopentenyl-diphosphate Delta-isomerase 1

GO:

id name namespace
GO:0008299 isoprenoid biosynthetic process biological_process
GO:0016787 hydrolase activity molecular_function
GO:0004452 isopentenyl-diphosphate delta-isomerase activity molecular_function

KEGG:

id description
K01823 idi, IDI; isopentenyl-diphosphate Delta-isomerase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790471.1 True 1448 mRNA 0.46 7 8326552 8333498
XM_039790472.1 False 1289 mRNA 0.44 6 8326556 8333498
XM_039790473.1 False 1170 mRNA 0.44 6 8328831 8333498

Neighbor

gene id symbol gene type direction distance location
adarb2 adarb2 coding upstream 46658 8056604 ~ 8279894 (+)
LOC120552129 arl14ep,LOC108272492 coding upstream 509715 7816152 ~ 7816837 (+)
klf6a klf6,LOC104927255,LOC104952265 coding upstream 562698 7759112 ~ 7763854 (+)
LOC120551990 gjd4 coding upstream 896943 7426387 ~ 7429609 (+)
ccny ccny,LOC106511473 coding upstream 907680 7375498 ~ 7418872 (+)
rmdn1 rmdn1,LOC102793817 coding downstream 39318 8372816 ~ 8377689 (+)
LOC120552258 NA coding downstream 165664 8499162 ~ 8506881 (+)
ccdc135 LOC104947771 coding downstream 174251 8507749 ~ 8521706 (+)
LOC120552263 NA coding downstream 189771 8523269 ~ 8535290 (+)
LOC120552264 NA coding downstream 189778 8523276 ~ 8548475 (+)
LOC120552410 NA non-coding upstream 13952 8304796 ~ 8312600 (+)
G218382 NA non-coding upstream 236544 8089556 ~ 8090008 (+)
G218353 NA non-coding upstream 374688 7805886 ~ 7951864 (+)
G218346 NA non-coding upstream 585992 7740273 ~ 7740560 (+)
G218337 NA non-coding upstream 638446 7687899 ~ 7688106 (+)
G218420 NA non-coding downstream 65421 8398919 ~ 8401079 (+)
G218421 NA non-coding downstream 75002 8408500 ~ 8418085 (+)
G218422 NA non-coding downstream 96940 8430438 ~ 8430938 (+)
G218425 NA non-coding downstream 131320 8464818 ~ 8465084 (+)
G218449 NA non-coding downstream 288002 8621500 ~ 8621720 (+)
LOC120552660 NA other upstream 953205 7360606 ~ 7373347 (+)
trdmt1 LOC104946219,LOC101070638 other upstream 3803846 4511713 ~ 4522706 (+)
ppp1r17 NA other upstream 4064954 4256048 ~ 4261598 (+)
chchd7 chchd7,LOC102799933 other upstream 4622177 3670420 ~ 3704375 (+)
G217723 cnn3 other upstream 4782767 3495450 ~ 3543785 (+)
LOC120552265 LOC101478037,LOC102216221,LOC100695799 other downstream 189801 8523299 ~ 8596356 (+)
G218441 LOC101478037,LOC102216221,LOC100695799 other downstream 217285 8550783 ~ 8606578 (+)
G218445 NA other downstream 222718 8556216 ~ 8557253 (+)
rnpc3 NA other downstream 878420 9211918 ~ 9230163 (+)
G218694 LOC106675555,LOC106675866,LOC106674541,LOC106099046 other downstream 1043446 9376944 ~ 9378147 (+)

Expression


Co-expression Network