LOC120552414 (LOC101468454,LOC102290369,LOC102196333,LOC103482264,LOC106914574)


Basic Information

Item Value
gene id LOC120552414
gene name LOC101468454,LOC102290369,LOC102196333,LOC103482264,LOC106914574
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 8363474 ~ 8372337 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790482.1
AAGAAACAACCAAAACTTTTGAGAGTTCCGTCGTAATTTTACCATGTTTATTGATCCGCAGTGACACTACAAAGTTTCGTTACATTTTAGTACAAATATACCAGACACAGAAATTAGTTGCGAATTGGAATGGACGACTAATGCGACCAGAAGACGTGAGGTTGCTAACGTCACTAACTGttagcttagctagctagctgagacTCGGCTCCACCCCCAGGTTGCTCAGCTGTTCTTGTCAGATAACCGTTAAACGTGACGCATTCATGTATAACCAGAGGCAGGCAAAATTGTATATTTTTCAAAAACTCAACAGTATTACCAGCTGCCATGGCCTCAGGTGGGGCCCCAGTGCCAGGGGCCACCCATTTGGCCACCAAGGTGGAGCTGACCATCTCCTGTGAGAACCTCATGGACATGGACATCTTGTCTAAGTCTGACCCTCTGTGTGCCTTGTACATCAACACTTCAGGCTCCCGCTGGCATGAGTTTGGACGCACAGAGATGATCCTGAACTGCCTGAATCCAAAGTTTGCCAAGAAGTTTGTGATTGACTACTATTTCGAGGTGGTGCAGAGGCTGAAGTTTTGCGTGTATGATATTGACAATACCACCTATGACCTGAGTGATGATGATTTTCTGGGGGAGCTTGAATGTACCCTGGGCCAGATTGTTTCTAGCAGGCAGATAACTCAATCTTTATTGCTGGAGGACAAGAGGCCTGCAGGTCATGGGACCATCACAaTCTGTGCTGAAGAAATAACAGATAACAGAGTGGTAAACTTTGAGGTGTCAGCCCGCAGGCTGGACAAAAAGTTTTTGTGGTGGTCCGACCCTTTCCTGGAATTCTACAAGCATACAGAAACTGGATGGCAGCTGGCTCACAGAACAGAGGTGGTAAAGGACAACCTTAACCCAATATGGAGACCCTTCCACATCTCATTGCAATCTCTCTGTGGAGGAGATGTGGAGAGACCTATAAAGGTTGATTGTTTTGATCACCATGTCAGCGGCTCCCATGACCTTATTGGGAGCTTTAAAGCCACACTTGCGGAGATGCAAATGGGAACACACATTTCCCcgGCTGAATTTGAGTGCATTTCCCCAAAAAAGTTAAAGAAGAGAAACTATAAAAACTCTGGGGTCATTTGCATCAAGAACTGCCAGGTGGTGAAGGAGTATACCTTTCTGGATTATATAATGGGGGGTTGTCAAATCAACTTCACTATCGCCATCGACTTCACGGGCTCTAACGGGCATCCCAGCTCTCCCCAGTCCCTCCATTACATCAACCCTGAAGGCTATAATGAATACCTGACAGCCATCTGGGCAGTGGGTAATATCATCCAGGACTATGACAGTAACAAGATGTTTCCTGTCTTTGGTTTTGGAGCCCAGGTCCCTCCCTCTTGGCAGGTTTCCCATGAATTTCCTATCAATTTCAATCCAGCAAATCCATTCTGCGCCGgCATAGAGGGTGTGGTGCAGGCCTACCGGCACTGTCTACCCCAGTTGAAGCTCTGGGGCCCCACCAACTTCTCTCCGATTATCAACCATGTAGCCTACTTCGCCAGACAAGCTCTTCGGCAGAATATGGCCTCACAATACTTTGTGCTGCTCATCATCACAGATGGAGTGATCACAGACATGGATCAGACATGCACTGCTATTGTGGAGGCCTCGCGTCTGCCCATGTCTATCATTATAGTGGGTGTGGGCGGGGCAGACTTCAGCGAAATGGAGGCCCTTGATAGTGATGGCAAATTGCTGTGTTCAGCCAGGGGCGATGTTGCTTCAAGAGACATCGTCCAGTTTGTGCCCTTCAGAGATTTCCAAGGAAACAGCGTGGCCCTTGGCCAGAGTGTCCTGGCGGAGCTGCCTGATCAAGTGGCCTCCTTCTTCAAATCTTACAAGCTGAAACCCCCTAATATATTCAGTGTTTCTGACCCGTCCTAGAAAGGCAGTGAGCTGGGAAAGGGTCGTAGTCGGGCGTTGGACCAGTTGTGTCAGCGAGAAGTCTGAGGAAGAGCATGGTGCTCGAAATGTTTCACAGCATTAAAAATCCTTCTAACGGGA
>XM_039790483.1
GGTAAATAAGTCTGAGTAAGCTTTCAACTGATATGAGGAAATGCTGTGTAACTTAGGAGGAGACTGTATAAATTGGTATTAGTTTTGGTGCTCTAGTATTACCAGCTGCCATGGCCTCAGGTGGGGCCCCAGTGCCAGGGGCCACCCATTTGGCCACCAAGGTGGAGCTGACCATCTCCTGTGAGAACCTCATGGACATGGACATCTTGTCTAAGTCTGACCCTCTGTGTGCCTTGTACATCAACACTTCAGGCTCCCGCTGGCATGAGTTTGGACGCACAGAGATGATCCTGAACTGCCTGAATCCAAAGTTTGCCAAGAAGTTTGTGATTGACTACTATTTCGAGGTGGTGCAGAGGCTGAAGTTTTGCGTGTATGATATTGACAATACCACCTATGACCTGAGTGATGATGATTTTCTGGGGGAGCTTGAATGTACCCTGGGCCAGATTGTTTCTAGCAGGCAGATAACTCAATCTTTATTGCTGGAGGACAAGAGGCCTGCAGGTCATGGGACCATCACAaTCTGTGCTGAAGAAATAACAGATAACAGAGTGGTAAACTTTGAGGTGTCAGCCCGCAGGCTGGACAAAAAGTTTTTGTGGTGGTCCGACCCTTTCCTGGAATTCTACAAGCATACAGAAACTGGATGGCAGCTGGCTCACAGAACAGAGGTGGTAAAGGACAACCTTAACCCAATATGGAGACCCTTCCACATCTCATTGCAATCTCTCTGTGGAGGAGATGTGGAGAGACCTATAAAGGTTGATTGTTTTGATCACCATGTCAGCGGCTCCCATGACCTTATTGGGAGCTTTAAAGCCACACTTGCGGAGATGCAAATGGGAACACACATTTCCCcgGCTGAATTTGAGTGCATTTCCCCAAAAAAGTTAAAGAAGAGAAACTATAAAAACTCTGGGGTCATTTGCATCAAGAACTGCCAGGTGGTGAAGGAGTATACCTTTCTGGATTATATAATGGGGGGTTGTCAAATCAACTTCACTATCGCCATCGACTTCACGGGCTCTAACGGGCATCCCAGCTCTCCCCAGTCCCTCCATTACATCAACCCTGAAGGCTATAATGAATACCTGACAGCCATCTGGGCAGTGGGTAATATCATCCAGGACTATGACAGTAACAAGATGTTTCCTGTCTTTGGTTTTGGAGCCCAGGTCCCTCCCTCTTGGCAGGTTTCCCATGAATTTCCTATCAATTTCAATCCAGCAAATCCATTCTGCGCCGgCATAGAGGGTGTGGTGCAGGCCTACCGGCACTGTCTACCCCAGTTGAAGCTCTGGGGCCCCACCAACTTCTCTCCGATTATCAACCATGTAGCCTACTTCGCCAGACAAGCTCTTCGGCAGAATATGGCCTCACAATACTTTGTGCTGCTCATCATCACAGATGGAGTGATCACAGACATGGATCAGACATGCACTGCTATTGTGGAGGCCTCGCGTCTGCCCATGTCTATCATTATAGTGGGTGTGGGCGGGGCAGACTTCAGCGAAATGGAGGCCCTTGATAGTGATGGCAAATTGCTGTGTTCAGCCAGGGGCGATGTTGCTTCAAGAGACATCGTCCAGTTTGTGCCCTTCAGAGATTTCCAAGGAAACAGCGTGGCCCTTGGCCAGAGTGTCCTGGCGGAGCTGCCTGATCAAGTGGCCTCCTTCTTCAAATCTTACAAGCTGAAACCCCCTAATATATTCAGTGTTTCTGACCCGTCCTAGAAAGGCAGTGAGCTGGGAAAGGGTCGTAGTCGGGCGTTGGACCAGTTGTGTCAGCGAGAAGTCTGAGGAAGAGCATGGTGCTCGAAATGTTTCACAGCATTAAAAATCCTTCTAACGGGA
>XM_039790484.1
CTGGGGTTAGCTCATATAACGTATTACCAGCTGCCATGGCCTCAGGTGGGGCCCCAGTGCCAGGGGCCACCCATTTGGCCACCAAGGTGGAGCTGACCATCTCCTGTGAGAACCTCATGGACATGGACATCTTGTCTAAGTCTGACCCTCTGTGTGCCTTGTACATCAACACTTCAGGCTCCCGCTGGCATGAGTTTGGACGCACAGAGATGATCCTGAACTGCCTGAATCCAAAGTTTGCCAAGAAGTTTGTGATTGACTACTATTTCGAGGTGGTGCAGAGGCTGAAGTTTTGCGTGTATGATATTGACAATACCACCTATGACCTGAGTGATGATGATTTTCTGGGGGAGCTTGAATGTACCCTGGGCCAGATTGTTTCTAGCAGGCAGATAACTCAATCTTTATTGCTGGAGGACAAGAGGCCTGCAGGTCATGGGACCATCACAaTCTGTGCTGAAGAAATAACAGATAACAGAGTGGTAAACTTTGAGGTGTCAGCCCGCAGGCTGGACAAAAAGTTTTTGTGGTGGTCCGACCCTTTCCTGGAATTCTACAAGCATACAGAAACTGGATGGCAGCTGGCTCACAGAACAGAGGTGGTAAAGGACAACCTTAACCCAATATGGAGACCCTTCCACATCTCATTGCAATCTCTCTGTGGAGGAGATGTGGAGAGACCTATAAAGGTTGATTGTTTTGATCACCATGTCAGCGGCTCCCATGACCTTATTGGGAGCTTTAAAGCCACACTTGCGGAGATGCAAATGGGAACACACATTTCCCcgGCTGAATTTGAGTGCATTTCCCCAAAAAAGTTAAAGAAGAGAAACTATAAAAACTCTGGGGTCATTTGCATCAAGAACTGCCAGGTGGTGAAGGAGTATACCTTTCTGGATTATATAATGGGGGGTTGTCAAATCAACTTCACTATCGCCATCGACTTCACGGGCTCTAACGGGCATCCCAGCTCTCCCCAGTCCCTCCATTACATCAACCCTGAAGGCTATAATGAATACCTGACAGCCATCTGGGCAGTGGGTAATATCATCCAGGACTATGACAGTAACAAGATGTTTCCTGTCTTTGGTTTTGGAGCCCAGGTCCCTCCCTCTTGGCAGGTTTCCCATGAATTTCCTATCAATTTCAATCCAGCAAATCCATTCTGCGCCGgCATAGAGGGTGTGGTGCAGGCCTACCGGCACTGTCTACCCCAGTTGAAGCTCTGGGGCCCCACCAACTTCTCTCCGATTATCAACCATGTAGCCTACTTCGCCAGACAAGCTCTTCGGCAGAATATGGCCTCACAATACTTTGTGCTGCTCATCATCACAGATGGAGTGATCACAGACATGGATCAGACATGCACTGCTATTGTGGAGGCCTCGCGTCTGCCCATGTCTATCATTATAGTGGGTGTGGGCGGGGCAGACTTCAGCGAAATGGAGGCCCTTGATAGTGATGGCAAATTGCTGTGTTCAGCCAGGGGCGATGTTGCTTCAAGAGACATCGTCCAGTTTGTGCCCTTCAGAGATTTCCAAGGAAACAGCGTGGCCCTTGGCCAGAGTGTCCTGGCGGAGCTGCCTGATCAAGTGGCCTCCTTCTTCAAATCTTACAAGCTGAAACCCCCTAATATATTCAGTGTTTCTGACCCGTCCTAGAAAGGCAGTGAGCTGGGAAAGGGTCGTAGTCGGGCGTTGGACCAGTTGTGTCAGCGAGAAGTCTGAGGAAGAGCATGGTGCTCGAAATGTTTCACAGCATTAAAAATCCTTCTAACGGGA
>XM_039790485.1
AAGAAACAACCAAAACTTTTGAGAGTTCCGTCGTAATTTTACCATGTTTATTGATCCGCAGTGACACTACAAAGTTTCGTTACATTTTAGTACAAATATACCAGACACAGAAATTAGTTGCGAATTGGAATGGACGACTAATGCGACCAGAAGACGTGAGGTTGCTAACGTCACTAACTGttagcttagctagctagctgagacTCGGCTCCACCCCCAGGTTGCTCAGCTGTTCTTGTCAGATAACCGTTAAACGTGACGCATTCATGTATAACCAGAGGCAGGCAAAATTGTATATTTTTCAAAAACTCAACAGTATTACCAGCTGCCATGGCCTCAGGTGGGGCCCCAGTGCCAGGGGCCACCCATTTGGCCACCAAGGTGGAGCTGACCATCTCCTGTGAGAACCTCATGGACATGGACATCTTGTCTAAGTCTGACCCTCTGTGTGCCTTGTACATCAACACTTCAGGCTCCCGCTGGCATGAGTTTGGACGCACAGAGATGATCCTGAACTGCCTGAATCCAAAGTTTGCCAAGAAGTTTGTGATTGACTACTATTTCGAGGTGGTGCAGAGGCTGAAGTTTTGCGTGTATGATATTGACAATACCACCTATGACCTGAGTGATGATGATTTTCTGGGGGAGCTTGAATGTACCCTGGGCCAGaTCTGTGCTGAAGAAATAACAGATAACAGAGTGGTAAACTTTGAGGTGTCAGCCCGCAGGCTGGACAAAAAGTTTTTGTGGTGGTCCGACCCTTTCCTGGAATTCTACAAGCATACAGAAACTGGATGGCAGCTGGCTCACAGAACAGAGGTGGTAAAGGACAACCTTAACCCAATATGGAGACCCTTCCACATCTCATTGCAATCTCTCTGTGGAGGAGATGTGGAGAGACCTATAAAGGTTGATTGTTTTGATCACCATGTCAGCGGCTCCCATGACCTTATTGGGAGCTTTAAAGCCACACTTGCGGAGATGCAAATGGGAACACACATTTCCCcgGCTGAATTTGAGTGCATTTCCCCAAAAAAGTTAAAGAAGAGAAACTATAAAAACTCTGGGGTCATTTGCATCAAGAACTGCCAGGTGGTGAAGGAGTATACCTTTCTGGATTATATAATGGGGGGTTGTCAAATCAACTTCACTATCGCCATCGACTTCACGGGCTCTAACGGGCATCCCAGCTCTCCCCAGTCCCTCCATTACATCAACCCTGAAGGCTATAATGAATACCTGACAGCCATCTGGGCAGTGGGTAATATCATCCAGGACTATGACAGTAACAAGATGTTTCCTGTCTTTGGTTTTGGAGCCCAGGTCCCTCCCTCTTGGCAGGTTTCCCATGAATTTCCTATCAATTTCAATCCAGCAAATCCATTCTGCGCCGgCATAGAGGGTGTGGTGCAGGCCTACCGGCACTGTCTACCCCAGTTGAAGCTCTGGGGCCCCACCAACTTCTCTCCGATTATCAACCATGTAGCCTACTTCGCCAGACAAGCTCTTCGGCAGAATATGGCCTCACAATACTTTGTGCTGCTCATCATCACAGATGGAGTGATCACAGACATGGATCAGACATGCACTGCTATTGTGGAGGCCTCGCGTCTGCCCATGTCTATCATTATAGTGGGTGTGGGCGGGGCAGACTTCAGCGAAATGGAGGCCCTTGATAGTGATGGCAAATTGCTGTGTTCAGCCAGGGGCGATGTTGCTTCAAGAGACATCGTCCAGTTTGTGCCCTTCAGAGATTTCCAAGGAAACAGCGTGGCCCTTGGCCAGAGTGTCCTGGCGGAGCTGCCTGATCAAGTGGCCTCCTTCTTCAAATCTTACAAGCTGAAACCCCCTAATATATTCAGTGTTTCTGACCCGTCCTAGAAAGGCAGTGAGCTGGGAAAGGGTCGTAGTCGGGCGTTGGACCAGTTGTGTCAGCGAGAAGTCTGAGGAAGAGCATGGTGCTCGAAATGTTTCACAGCATTAAAAATCCTTCTAACGGGA

Function

NR:

description
copine-3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790482.1 True 2076 mRNA 0.48 17 8363474 8372337
XM_039790483.1 False 1856 mRNA 0.49 17 8363474 8372022
XM_039790484.1 False 1781 mRNA 0.49 17 8363474 8371870
XM_039790485.1 False 2001 mRNA 0.48 16 8363474 8372337

Neighbor

gene id symbol gene type direction distance location
LOC120552411 LOC103369038,LOC104941959,LOC108248835 coding downstream 2101 8347956 ~ 8361373 (-)
LOC120552407 cpne3,LOC104924704,LOC102292005,LOC108248831 coding downstream 16223 8334787 ~ 8347251 (-)
LOC120552408 wdr37,LOC102292542,LOC101470374 coding downstream 36619 8303823 ~ 8326855 (-)
pfkpa LOC101472402,LOC100702375,LOC102201923,LOC102790125,LOC104924699 coding downstream 474475 7861932 ~ 7888999 (-)
fzd8a fzd8,LOC104927254,LOC104956203 coding downstream 920775 7439940 ~ 7442699 (-)
LOC120552161 wwp1 coding upstream 5682 8378019 ~ 8417988 (-)
snx16 snx16 coding upstream 103790 8476127 ~ 8498014 (-)
LOC120552041 ahrr coding upstream 267204 8639541 ~ 8712753 (-)
LOC120552044 anks6 coding upstream 352112 8724449 ~ 8734819 (-)
ncf2 ncf2 coding upstream 395883 8768220 ~ 8779822 (-)
G218455 NA non-coding downstream 158954 8203380 ~ 8204520 (-)
G218454 NA non-coding downstream 160838 8202435 ~ 8202636 (-)
G218450 NA non-coding downstream 306376 8056690 ~ 8057098 (-)
G218368 NA non-coding downstream 597077 7763500 ~ 7766397 (-)
LOC120552532 NA non-coding downstream 617042 7744835 ~ 7746432 (-)
G218473 NA non-coding upstream 62712 8435049 ~ 8435949 (-)
G218477 NA non-coding upstream 87161 8459498 ~ 8459710 (-)
G218469 NA non-coding upstream 150613 8522950 ~ 8533544 (-)
G218503 NA non-coding upstream 175436 8547773 ~ 8596404 (-)
G218522 NA non-coding upstream 261763 8634100 ~ 8634685 (-)
G218453 adarb2 other downstream 167595 8194929 ~ 8195879 (-)
G218085 LOC107687935 other downstream 2662898 5700229 ~ 5700576 (-)
G218019 NA other downstream 3326770 5027505 ~ 5036704 (-)
G217837 NA other downstream 4422145 3936010 ~ 3941329 (-)
G217780 chchd7,LOC102799933 other downstream 4659117 3692952 ~ 3704357 (-)
G218471 NA other upstream 58127 8430464 ~ 8430930 (-)
prkdc prkdc other upstream 425444 8797781 ~ 8851726 (-)
LOC120551928 LOC104943218,LOC103369878,LOC100710535,LOC102301415,LOC101469805 other upstream 585072 8957409 ~ 8970638 (-)
cngb3.1 LOC103363254,LOC102786718,LOC108428960,LOC104948783 other upstream 1461125 9833462 ~ 9848241 (-)
G218950 NA other upstream 2205062 10577399 ~ 10669527 (-)

Expression


Co-expression Network