pcolce2b (pcolce2)


Basic Information

Item Value
gene id pcolce2b
gene name pcolce2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 17533066 ~ 17542989 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790495.1
aaaggTAAGTCTAGTATGCTTTTAAAAGTAATAACAGTCTCTGCTGCCCTCATATCCAGGCCATCACACGGATCACTTTACGTCGTTGTTCCAAcagCCTGTGCTTCGTCCCTCCTTCCAGACAGAACAAATACTATATTCATCTTCTACGGCTTGCAGTTACTGGAACTCCCTGCAGGAACTCCTGGTTACTTTACTCCACCGTTTGAGCTGCAGAACACAATGCCATTCATGCCACGGGGCGAAAACCGGCGAAGCGCCTGCTCCCTTAACCCAGCAATGTGGAGAACATGCAGTATTTTTTGCGCATGGAGTCTACTGTTCTTGACAGAGGTCTGTGCGCAGTCTCAGCGGAGACCAACCTTCACATGCGGCGGGAACATTACAGGAGATTCTGGAGTAATCGGGAGCCAGGGGTACCCAGGAGTTTACCCTCCAAATACCAAATGTGTGTGGAGGATTACAGTCCCTGAGGGAAAGGTCGTGGTCCTGTCATTCCGCTTTATTGACTTGGAGAGCGACAACCTGTGCCGCTATGACTATGTGGATGTTTACAGTGGCCATATCAGTGTGCAAAGACTTGGTCGCTTCTGTGGGACGTTCAAGCCAGGAGCCCTGGTATCCACGGGCAACAAGATGCTCCTGCAGATGGTATCTGATGCCAACACAGCTGGGAGTGGCTTCCTGGCTGTTTTCTCTGCTGCCCACCCACATGAGAGAGGGGAACAGTACTGTGGAGGCAGATTGGACAAGCCCTCTGGGACTTTTAAAACTCCCAACTGGCCTGAGAAGGACTACCCAGCTGGTGTCACCTGCTCCTGGCACATAGTGGCACCAAAGAACCAGATTATTGAAGTCAAGTTCGAAAAGTTTGATGTGGAAAGGGATAACTACTGCCGCTATGACCATGTTTCCATTTTCAACGGGGCAGAAATCAACGACGCCAAGAGAATTGGCAAATACTGTGGAGACAGCCCCCCAGCGCCAGTGTTCTCAGACGGGAACCAGCTCCTCATCCAGTTCCTGTCAGATCTCAGTCTAACTGCAGACGGCTTCATTGGACACTacaagttcagaccaaagaaatTCCCCACCACCACGATACCACCCACCACTACCACTCAGCCAGTCACCACCAGGCCCATACCTCTAAAGTACTCTGTAGCCCTGTGCCagcagaaatgcaaaagatgGGGAACACTTGAGAGCAATTACTGCTCCAGCAATTTTGTGATAACCGGGACTGTCATTACTGCGGTGATGAGAGGAGGAAGTATGTACGCCACCATCTCTATAATCAACGTTTATAAAGAAGGCACTCTGGCCATCCAGCAGGCAGGAAAGACGATGAGCACCAAGATCATTATCCTGTGCAAGAAGTGTCCATTTGTAAGGAGAGGCTTGAACTACGTCTTCATGGGCCAGGTGGACGAGGATGGCCGGGGGAAAATCGCCCCCCACCACTTTGTTATGGCGTTTAAGACAAAGAACCAGAAAGGACTCAACGTTCTGAAAAACAAGCAGTGCTGAGTTCCAGTAGCGCTGAGGTTTTCCACTGGACAGGTTTGCCTGAGGCTCAGCTGTGGATGGAAACAATTAAGCAAAGAAATGATCTCCAtctcaacaacacaaacaccacaACAAAACTGAAAGTGGATGCAGAGATGCCAGAACAAAACTTAACATAATCCATTCAATTAGGTGCAACTTAGAGTTTTGCATTTATTAATTTTGCTGCAGATCGCATGTTTTTAGAATAAACAAGAAGACATTAAGTACTTctacttctgtctgtcttcttttAAAAGACCAGTAGGTTAGTCTGTTTTATAACCTCAGATTAATCAGCAACACAATTAGTTGAAGTTTCCATCCCTGTTCCACAGCCCATTCTCACTCTGCCTAGTCACATTCCTGTCATGCCCCGAGCACGGATTTAAAATGTAGCCAGTAACAGGCGCCCAGAATAGGGAGTATAACAATTTACGTTTCAGTTTTtcataaaacaaacattaatCAGATTGTTTAAATTTTCAGTGTGCACACCTGTTCTGACATCCTGTGATGGCACTATTCATTTCACATTTTTCTACAttctacttttcagtttttttcccttttgagGCTGTGGAGTGCAATGTGATTGCAATGGATTTTATTATTTAGTATATGCATTAAACAATAATATCTTTAATTTCACAAGGCTGATTAATATCCATAGGGGATTTGTCACAGCTGATTGTTGTTGCTTGAATGACGGCATTAACAACCTGCAGTTCATTTTCTGTGTTCAATTTTAATGGGCAGGATTTGGAAGTTTTTATGTGGTGGtaaaaaaagtgcaatatttaatatatacatGATTCTTTTTTGAAAGATTtttatgctgtttttttgtgaaagAAATGAGGACCTTCCTAGCTAAAGCTCTTTTTCTTTAGTTTGTTTACAGATGCAAAGCACCGCTATCAGCATACATCatttactttgtttttaaaggcagagctatgaaatgaaaaatattttcaTATGAAAAAGTCTgtgaatattatttatattttattgttttcatcTTCCAAAATAAAACTCCTTTAACATGTTCA
>XM_039790497.1
TCATGTTGACAGGAAGATTAAGCGGGATCCATGGCCGTAACAACACGCAACTCGCACTACACGcagCCTGTGCTTCGTCCCTCCTTCCAGACAGAACAAATACTATATTCATCTTCTACGGCTTGCAGTTACTGGAACTCCCTGCAGGAACTCCTGGTTACTTTACTCCACCGTTTGAGCTGCAGAACACAATGCCATTCATGCCACGGGGCGAAAACCGGCGAAGCGCCTGCTCCCTTAACCCAGCAATGTGGAGAACATGCAGTATTTTTTGCGCATGGAGTCTACTGTTCTTGACAGAGGTCTGTGCGCAGTCTCAGCGGAGACCAACCTTCACATGCGGCGGGAACATTACAGGAGATTCTGGAGTAATCGGGAGCCAGGGGTACCCAGGAGTTTACCCTCCAAATACCAAATGTGTGTGGAGGATTACAGTCCCTGAGGGAAAGGTCGTGGTCCTGTCATTCCGCTTTATTGACTTGGAGAGCGACAACCTGTGCCGCTATGACTATGTGGATGTTTACAGTGGCCATATCAGTGTGCAAAGACTTGGTCGCTTCTGTGGGACGTTCAAGCCAGGAGCCCTGGTATCCACGGGCAACAAGATGCTCCTGCAGATGGTATCTGATGCCAACACAGCTGGGAGTGGCTTCCTGGCTGTTTTCTCTGCTGCCCACCCACATGAGAGAGGGGAACAGTACTGTGGAGGCAGATTGGACAAGCCCTCTGGGACTTTTAAAACTCCCAACTGGCCTGAGAAGGACTACCCAGCTGGTGTCACCTGCTCCTGGCACATAGTGGCACCAAAGAACCAGATTATTGAAGTCAAGTTCGAAAAGTTTGATGTGGAAAGGGATAACTACTGCCGCTATGACCATGTTTCCATTTTCAACGGGGCAGAAATCAACGACGCCAAGAGAATTGGCAAATACTGTGGAGACAGCCCCCCAGCGCCAGTGTTCTCAGACGGGAACCAGCTCCTCATCCAGTTCCTGTCAGATCTCAGTCTAACTGCAGACGGCTTCATTGGACACTacaagttcagaccaaagaaatTCCCCACCACCACGATACCACCCACCACTACCACTCAGCCAGTCACCACCAGGCCCATACCTCTAAAGTACTCTGTAGCCCTGTGCCagcagaaatgcaaaagatgGGGAACACTTGAGAGCAATTACTGCTCCAGCAATTTTGTGATAACCGGGACTGTCATTACTGCGGTGATGAGAGGAGGAAGTATGTACGCCACCATCTCTATAATCAACGTTTATAAAGAAGGCACTCTGGCCATCCAGCAGGCAGGAAAGACGATGAGCACCAAGATCATTATCCTGTGCAAGAAGTGTCCATTTGTAAGGAGAGGCTTGAACTACGTCTTCATGGGCCAGGTGGACGAGGATGGCCGGGGGAAAATCGCCCCCCACCACTTTGTTATGGCGTTTAAGACAAAGAACCAGAAAGGACTCAACGTTCTGAAAAACAAGCAGTGCTGAGTTCCAGTAGCGCTGAGGTTTTCCACTGGACAGGTTTGCCTGAGGCTCAGCTGTGGATGGAAACAATTAAGCAAAGAAATGATCTCCAtctcaacaacacaaacaccacaACAAAACTGAAAGTGGATGCAGAGATGCCAGAACAAAACTTAACATAATCCATTCAATTAGGTGCAACTTAGAGTTTTGCATTTATTAATTTTGCTGCAGATCGCATGTTTTTAGAATAAACAAGAAGACATTAAGTACTTctacttctgtctgtcttcttttAAAAGACCAGTAGGTTAGTCTGTTTTATAACCTCAGATTAATCAGCAACACAATTAGTTGAAGTTTCCATCCCTGTTCCACAGCCCATTCTCACTCTGCCTAGTCACATTCCTGTCATGCCCCGAGCACGGATTTAAAATGTAGCCAGTAACAGGCGCCCAGAATAGGGAGTATAACAATTTACGTTTCAGTTTTtcataaaacaaacattaatCAGATTGTTTAAATTTTCAGTGTGCACACCTGTTCTGACATCCTGTGATGGCACTATTCATTTCACATTTTTCTACAttctacttttcagtttttttcccttttgagGCTGTGGAGTGCAATGTGATTGCAATGGATTTTATTATTTAGTATATGCATTAAACAATAATATCTTTAATTTCACAAGGCTGATTAATATCCATAGGGGATTTGTCACAGCTGATTGTTGTTGCTTGAATGACGGCATTAACAACCTGCAGTTCATTTTCTGTGTTCAATTTTAATGGGCAGGATTTGGAAGTTTTTATGTGGTGGtaaaaaaagtgcaatatttaatatatacatGATTCTTTTTTGAAAGATTtttatgctgtttttttgtgaaagAAATGAGGACCTTCCTAGCTAAAGCTCTTTTTCTTTAGTTTGTTTACAGATGCAAAGCACCGCTATCAGCATACATCatttactttgtttttaaaggcagagctatgaaatgaaaaatattttcaTATGAAAAAGTCTgtgaatattatttatattttattgttttcatcTTCCAAAATAAAACTCCTTTAACATGTTCA
>XM_039790498.1
CTACCTTAGGCGATTTCAAACACCTACTTATAATGATGTATCAGCTAGTGTAAAATGCACATTCTTATTATAGAACAGGCCACAGTTGTCCTCTATCACTCCACATCTGcagCCTGTGCTTCGTCCCTCCTTCCAGACAGAACAAATACTATATTCATCTTCTACGGCTTGCAGTTACTGGAACTCCCTGCAGGAACTCCTGGTTACTTTACTCCACCGTTTGAGCTGCAGAACACAATGCCATTCATGCCACGGGGCGAAAACCGGCGAAGCGCCTGCTCCCTTAACCCAGCAATGTGGAGAACATGCAGTATTTTTTGCGCATGGAGTCTACTGTTCTTGACAGAGGTCTGTGCGCAGTCTCAGCGGAGACCAACCTTCACATGCGGCGGGAACATTACAGGAGATTCTGGAGTAATCGGGAGCCAGGGGTACCCAGGAGTTTACCCTCCAAATACCAAATGTGTGTGGAGGATTACAGTCCCTGAGGGAAAGGTCGTGGTCCTGTCATTCCGCTTTATTGACTTGGAGAGCGACAACCTGTGCCGCTATGACTATGTGGATGTTTACAGTGGCCATATCAGTGTGCAAAGACTTGGTCGCTTCTGTGGGACGTTCAAGCCAGGAGCCCTGGTATCCACGGGCAACAAGATGCTCCTGCAGATGGTATCTGATGCCAACACAGCTGGGAGTGGCTTCCTGGCTGTTTTCTCTGCTGCCCACCCACATGAGAGAGGGGAACAGTACTGTGGAGGCAGATTGGACAAGCCCTCTGGGACTTTTAAAACTCCCAACTGGCCTGAGAAGGACTACCCAGCTGGTGTCACCTGCTCCTGGCACATAGTGGCACCAAAGAACCAGATTATTGAAGTCAAGTTCGAAAAGTTTGATGTGGAAAGGGATAACTACTGCCGCTATGACCATGTTTCCATTTTCAACGGGGCAGAAATCAACGACGCCAAGAGAATTGGCAAATACTGTGGAGACAGCCCCCCAGCGCCAGTGTTCTCAGACGGGAACCAGCTCCTCATCCAGTTCCTGTCAGATCTCAGTCTAACTGCAGACGGCTTCATTGGACACTacaagttcagaccaaagaaatTCCCCACCACCACGATACCACCCACCACTACCACTCAGCCAGTCACCACCAGGCCCATACCTCTAAAGTACTCTGTAGCCCTGTGCCagcagaaatgcaaaagatgGGGAACACTTGAGAGCAATTACTGCTCCAGCAATTTTGTGATAACCGGGACTGTCATTACTGCGGTGATGAGAGGAGGAAGTATGTACGCCACCATCTCTATAATCAACGTTTATAAAGAAGGCACTCTGGCCATCCAGCAGGCAGGAAAGACGATGAGCACCAAGATCATTATCCTGTGCAAGAAGTGTCCATTTGTAAGGAGAGGCTTGAACTACGTCTTCATGGGCCAGGTGGACGAGGATGGCCGGGGGAAAATCGCCCCCCACCACTTTGTTATGGCGTTTAAGACAAAGAACCAGAAAGGACTCAACGTTCTGAAAAACAAGCAGTGCTGAGTTCCAGTAGCGCTGAGGTTTTCCACTGGACAGGTTTGCCTGAGGCTCAGCTGTGGATGGAAACAATTAAGCAAAGAAATGATCTCCAtctcaacaacacaaacaccacaACAAAACTGAAAGTGGATGCAGAGATGCCAGAACAAAACTTAACATAATCCATTCAATTAGGTGCAACTTAGAGTTTTGCATTTATTAATTTTGCTGCAGATCGCATGTTTTTAGAATAAACAAGAAGACATTAAGTACTTctacttctgtctgtcttcttttAAAAGACCAGTAGGTTAGTCTGTTTTATAACCTCAGATTAATCAGCAACACAATTAGTTGAAGTTTCCATCCCTGTTCCACAGCCCATTCTCACTCTGCCTAGTCACATTCCTGTCATGCCCCGAGCACGGATTTAAAATGTAGCCAGTAACAGGCGCCCAGAATAGGGAGTATAACAATTTACGTTTCAGTTTTtcataaaacaaacattaatCAGATTGTTTAAATTTTCAGTGTGCACACCTGTTCTGACATCCTGTGATGGCACTATTCATTTCACATTTTTCTACAttctacttttcagtttttttcccttttgagGCTGTGGAGTGCAATGTGATTGCAATGGATTTTATTATTTAGTATATGCATTAAACAATAATATCTTTAATTTCACAAGGCTGATTAATATCCATAGGGGATTTGTCACAGCTGATTGTTGTTGCTTGAATGACGGCATTAACAACCTGCAGTTCATTTTCTGTGTTCAATTTTAATGGGCAGGATTTGGAAGTTTTTATGTGGTGGtaaaaaaagtgcaatatttaatatatacatGATTCTTTTTTGAAAGATTtttatgctgtttttttgtgaaagAAATGAGGACCTTCCTAGCTAAAGCTCTTTTTCTTTAGTTTGTTTACAGATGCAAAGCACCGCTATCAGCATACATCatttactttgtttttaaaggcagagctatgaaatgaaaaatattttcaTATGAAAAAGTCTgtgaatattatttatattttattgttttcatcTTCCAAAATAAAACTCCTTTAACATGTTCA

Function

symbol description
pcolce2 Enables collagen binding activity; heparin binding activity; and peptidase activator activity. Predicted to be involved in positive regulation of peptidase activity. Predicted to act upstream of or within cellular response to leukemia inhibitory factor. Predicted to be located in extracellular region.

NR:

description
procollagen C-endopeptidase enhancer 2-like

GO:

id name namespace
GO:0005576 extracellular region cellular_component

KEGG:

id description
K24361 PCOLCE; procollagen C-endopeptidase enhancer

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790495.1 False 2603 mRNA 0.44 10 17533066 17542989
XM_039790497.1 False 2572 mRNA 0.44 10 17533066 17542857
XM_039790498.1 True 2618 mRNA 0.44 10 17533066 17541394

Neighbor

gene id symbol gene type direction distance location
chst2b chst2 coding downstream 16885 17512784 ~ 17516181 (-)
dipk2ab LOC104937275,LOC103365306 coding downstream 87057 17418629 ~ 17446009 (-)
zic1 zic1 coding downstream 433387 17096251 ~ 17099679 (-)
agtr1b agtr1 coding downstream 538489 16987809 ~ 16994577 (-)
cpb1 cpb1 coding downstream 545381 16979924 ~ 16987685 (-)
acad11 acad11,LOC102785504 coding upstream 10194 17553183 ~ 17574031 (-)
nphp3 nphp3 coding upstream 34680 17577669 ~ 17589090 (-)
LOC120552117 LOC104943332 coding upstream 47405 17590394 ~ 17592292 (-)
si:ch211-285f17.1 kiaa1217 coding upstream 49388 17592377 ~ 17711806 (-)
LOC120552712 NA coding upstream 170626 17713615 ~ 17715801 (-)
LOC120551964 NA non-coding downstream 134831 17115230 ~ 17398235 (-)
G220488 NA non-coding downstream 331732 17198391 ~ 17201334 (-)
G220445 NA non-coding downstream 634529 16898189 ~ 16898537 (-)
G220443 NA non-coding downstream 645042 16887256 ~ 16888024 (-)
G220382 NA non-coding downstream 787654 16742287 ~ 16745412 (-)
G220611 NA non-coding upstream 8771 17551760 ~ 17552963 (-)
G220665 NA non-coding upstream 367530 17910519 ~ 17910741 (-)
G220659 NA non-coding upstream 381582 17924571 ~ 17924957 (-)
LOC120552218 NA non-coding upstream 396269 17939258 ~ 17972500 (-)
G220687 rbm33 non-coding upstream 467794 18010783 ~ 18015252 (-)
G220412 csrnp1,LOC104937158,LOC102793366 other downstream 657766 16874649 ~ 16875300 (-)
LOC120552205 LOC100711537,LOC102295084,LOC108230444,LOC106948898,LOC103140410 other downstream 737942 16782072 ~ 16795124 (-)
drd3 drd3 other downstream 1248331 16266303 ~ 16284735 (-)
G220124 NA other downstream 1467845 16064670 ~ 16065221 (-)
G220117 usp12,LOC107701680,LOC107705210 other downstream 1528302 16003879 ~ 16004764 (-)
si:ch73-174h16.4 LOC103364270,LOC104947970 other upstream 883773 18426762 ~ 18483776 (-)
G220833 NA other upstream 1067247 18610236 ~ 18697970 (-)
LOC120552352 colec12,LOC102798044 other upstream 1229988 18772977 ~ 18810944 (-)
mettl4 mettl4 other upstream 1395924 18938913 ~ 18949495 (-)
G221048 ankh other upstream 1772602 19315591 ~ 19326894 (-)

Expression


Co-expression Network