eef1e1 (eef1e1,LOC102782929)


Basic Information

Item Value
gene id eef1e1
gene name eef1e1,LOC102782929
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 10886540 ~ 10895407 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790535.1
CAATCAGGTCAAACGCACACTGCTTTGCTCCTGTGACAGTCAGAATCAGAAACATGGCGTTACGGGAGCTATCGTCGCTGGAGAAATACTTAGGATTGAAAAAGCCGAACAAGTACAGTACACAGGCGGATAAAAAGATACCTGTGCTACAGAATAATAATGGTCCTCCACTGGTAGGGCTGGTGACTATCGCCTGTCACCTGGTGAAAGAGGCCAAGCGCCCAAACCTGCTGGGAGAGTGTGCAGAGAGCAGGGCTGTGGTGCAGCAGTGGCTGGAGTACCGAGTCACCAAGCTGGACGGCTGCACAAAGGAAGACATCAAGACCATCCTGAAGGACCTCAACCTCTACCTGCAAGACAAGGTCTACATGGCTGGCAACCAGTTCACCTTAGCTGACCCTTTCATGTACTATGGAATCCATCCACTCATAGTGGACTTGGCCATCCAGGACAAGGAGCAGTATGTGAACGTGACGCGATGGTTCGACCACATTCAGCACTACCCCGGCATCCGACACCACCTCCCTCCCGTAGTTGTGCCCAGGAACAGACTTTACACCAGCAAACACCACTGAGACGCGACCCCCACACCCCCCTCCCATCCCAGCCTGACTCATCACAAGCTCGTCTGTCTGTTGGACTAGACCTAGGCAAATTATCTCCTAAAATCCAAGAGCGTATTGCTTCATTATCACAATTTGAGGAGGTTTCCACATAGTCACTTCTATCCAAGATCTCCTTTTATCGGATCATGATTCCTGCCTTAATGTTTTGTCCTGGTCACATACCTAAACCCTGTTTGctctttggattttttttaaatatatatgtttaaCCATGGAAATTAATAACAAAACAACTAAAGCCTAACAGCTTTAGTGTATGAGGAACTGAAACGCCATTAAGGGATTGCTTACTAATAAATTCAAGTTCGGTTCATATTCTTTAACTTCTCAATCATTTAGTCCTGCTCACACTAAAACAAGTTTGGTGTCTTAACCCTTATTCAGTAACTATGGAGCAAAGATGTGAGACACTCACGTTggtcttttatgttttttgttgcaAATTCTTTTGTAGGACTTTTGGAAGTCTTCGTTTGTATGGTTGTTTTCAAAGGGAAAGCTGTACTGTTTGCGGTGAAGTGCTGCTAGCTTGTTAAAAAGGTGTTTCTGTTTATAAATTGTGGTTtaatggtttaatttttttttggagagGTTTTAAAAGACTTCAAAGATTTTACTTAACTGGTATTATGTCCTCAGGACAAACAGCGTCCTTCAGGCCATatcaatgcatttcctgcaaCAGTTTGTCCAAATAAATGTGGTTGCTGGTTCAGCATCATAACCCCATAATGACCACAGTCATTCTGCCAGCTCTCTGCCCTAAAGAACATAGTCGTCTCTCTCAGCTCGCATCCCTATCAGGACTGTTTTCTTaggattttatgtttttttacatgCAACTCTAAGCCATTTCactggacagtgtgtgtgtgtgtgtgtgtgtgtgattacatCCGCTCTCTGTCCCACTTCCTCACCACCAGTCGTGTGGGCAGCAGTGAGCAGTTGAGCGTCAGCCCCAGAGTCAGAGATCAGAGTGAGGCTCCAATCAGTCCCACTACCACCACTGTTGATGCTGCAGGCCAGAGAGAGGGCAGCGGGCTCACCAGCTGCCACACagagccagccagccagccaaggCCAGAACCCAGACCCCTGGGCGACAGTCAGCCACTGTGTGTCATTTCAACCCTCGCTCTCCCACGGGGCTACTGGCGAGAGAAGGacgaagggagggagggagggagggaggccatagagaggaaaaaggaaaaagagcaCCCAGAGGCCGAGGGATCTTTTTGTGACGTGAACAATGATCCGTGCCTCGGAAAGCCTTACTGCTGCTGGCTGGAGGTGTGCTATTGGCACCGTTAACAGGCCATGTCGTCGTCGTGTCGGCAGACCCTGTAATTAACATCATGAAGGTAATGATAAGTAGACAAAgaacaacagaaaaatacatGTTATTGAGCTAAATTCAAGTGATCATTGCTTTTGCTTATGTATAGAACTATTAAAAAATACGCTAAAGTATTTTAACAAACATTGACTGTTCTAGTCTGGATAAATCTTAGAAGACTGGATGCTTTTGTGTTTGCATCAAAGTTTCTGTTGTTCTTTACTGTcctattaaaatgttttcagccACATTTCTCATTTCCTGCATCCAAACAGACTCGCCATATCTTTGTGTCTGTTGCTTATAGCTTCAGTGGTTTTCATAATCTGATGTTACCATGCTGTTCATCCTTTGCCAATAAATCAGAGGGATGCACACCTCATGACCCCTGACTTCTGTGCA

Function

symbol description
eef1e1 Predicted to act upstream of or within positive regulation of DNA damage response, signal transduction by p53 class mediator. Predicted to be part of aminoacyl-tRNA synthetase multienzyme complex. Orthologous to human EEF1E1 (eukaryotic translation elongation factor 1 epsilon 1).

NR:

description
eukaryotic translation elongation factor 1 epsilon-1 isoform X2

GO: NA

KEGG:

id description
K15439 EEF1E1, AIMP3; eukaryotic translation elongation factor 1 epsilon-1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790535.1 True 2373 mRNA 0.45 4 10886540 10895407

Neighbor

gene id symbol gene type direction distance location
txndc5 txndc5 coding downstream 38244 10834867 ~ 10848296 (-)
rec8b NA coding downstream 143072 10725062 ~ 10743468 (-)
si:ch211-196f5.2 NA coding downstream 164518 10720158 ~ 10722022 (-)
nanog NA coding downstream 187071 10697289 ~ 10699469 (-)
fen1 fen1 coding downstream 200601 10679795 ~ 10685939 (-)
slc35b3 slc35b3 coding upstream 48685 10944092 ~ 10956895 (-)
ofcc1 ofcc1 coding upstream 229726 11125133 ~ 11210500 (-)
tfap2a tfap2a coding upstream 427195 11322602 ~ 11336390 (-)
mak mak coding upstream 447334 11342741 ~ 11357345 (-)
ankrd33ba LOC103353357,LOC104951657,LOC103456515 coding upstream 917947 11813354 ~ 11828173 (-)
G218986 NA non-coding downstream 169641 10715085 ~ 10716899 (-)
G218951 NA non-coding downstream 221757 10633287 ~ 10664783 (-)
LOC120552022 NA non-coding downstream 224814 10658465 ~ 10661726 (-)
G218940 NA non-coding downstream 287732 10597708 ~ 10598808 (-)
G218872 ngdn non-coding downstream 412927 10472123 ~ 10473613 (-)
G219113 NA non-coding upstream 483200 11378607 ~ 11477103 (-)
G219125 NA non-coding upstream 521325 11416732 ~ 11420755 (-)
G219130 tmem56,LOC103482516,LOC104925854,LOC107094156 non-coding upstream 545837 11441244 ~ 11445755 (-)
G219138 NA non-coding upstream 571687 11467094 ~ 11469317 (-)
G219169 NA non-coding upstream 876444 11771851 ~ 11807316 (-)
bloc1s5 bloc1s5 other downstream 17753 10864285 ~ 10868787 (-)
G218950 NA other downstream 217013 10577399 ~ 10669527 (-)
LOC120552013 NA other downstream 271319 10604320 ~ 10615221 (-)
cngb3.1 LOC103363254,LOC102786718,LOC108428960,LOC104948783 other downstream 1038299 9833462 ~ 9848241 (-)
LOC120551928 LOC104943218,LOC103369878,LOC100710535,LOC102301415,LOC101469805 other downstream 1915902 8957409 ~ 8970638 (-)
pign pign,LOC104945957,LOC102796964 other upstream 1521941 12417348 ~ 12433035 (-)
bmi1a bmi1,commd3,LOC103371470,LOC106919738,LOC103482475 other upstream 2282853 13178260 ~ 13194142 (-)
pdk3a pdk3 other upstream 2793014 13688421 ~ 13696741 (-)
sema5a sema5a other upstream 2928051 13823458 ~ 13940381 (-)
neto1l neto1,LOC102782256 other upstream 3089959 13985366 ~ 14076069 (-)

Expression


Co-expression Network