ncf2 (ncf2)


Basic Information

Item Value
gene id ncf2
gene name ncf2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 8768220 ~ 8779822 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790545.1
CTTAATTTGGTCTATAGCTCAGTGTACTCCTAACCAGCGACTATGTCTTTTGTGGACACTCTGCGCCAGTGGGACACGGCTGTAACTTGTGTTGAAAGACAGGATTTGTCACAGGCACTCAGGATTTTCCTGGCTATCCAAGAACCAAACTCCAAAATTAGTTTTGACATTGGCTGTCTCCATCTTCTTAACCAAGACCTGGATGCTGCTGAAAAGGCCTTTGATTGCAGCATACGCAAGGATGAACATTTGGCTGTTGCCTTCTTTCAAAGAGGAATGACGTTTTACAAAAAGAAGAGGTATGAGGAGAGCTTAGCTGATTTCCAGCATGCCTTCAAAGCACTAAGAGGCAACCAGCTGATAGATTACAAAGCACTTGGTCTCAGATACAAATTATATGCATGTGAGGTTCTGATCAATGTGGCTCTGGCTGAGGCTCAGCTGGGTCACTGGGAAAAAGCTCATGAAAACCTTGTGAAGGCTCTCAACTACAAGACGGATGCCAAGCTCAACATCATCGACAAAGCCCTGGATTCTGCCCTGaaacagaaactttTCAAGCCAGTCGAGTTCCCATCCAAAGTGCTGTTCAAACCAAATAAGCATTATGTTGCTGAGCTGGAGAAGAAGGACTACCTGGGCAAAGCAAAGGTTGTTGCCTCGGTCGTGCCTCAGGATGCCTTCTCTGGATTTGCCCCACTACAGCCACAGGTTGAAGACGGTCCAACTCGTCCAAAAGAACCTGAGGTTCTAAGGGCTTTAGAAGGAGAACCCCACACTGTGCTGTTTGAGTTTGTTCCTGAGACCAGTGATGAGTTGGCTGTAGTGCCGGGCAACATTGTGTTTGTACTGCAGAAGGGTGCCGACAACTGGGCATCTGTGATCTTCAATGAAAGAAGGGGACTTGTTCCGTACAATTACCTGGAACCTTTGGAGATCAACTTGGCTTCTAAACAGAATGAGGGAATATCTCAGCCTCCAAGTCGAAAACCACCAACCAGACCTGAAAGGAAACAAGGTCTTACTCCTAGTGGGAACAGCAGCGGAGATACAAAACGAAAGGAAGAACAAAAACAGCCTAAGGACAACTCCTATATTGTCAAAGTCCGTTTTACATTCAACTTTGCTGTCTCAGTACCACCCGGGTCTCCCTATGCTGTACTGATTGAGAAAATCAGTAAGAAACTGAATCGCCCTCCTACTGCAATCACCTTGAGTTTAACCTCCAAGGCAACAGAACAAAGTGTAATCAATGCCAGCACAGAAATGGAAAGTGTGTGGAGTCGTGCCAGTGGCGTGCACATCACTTTGTGGTGTACCACCACAGAGCAAACTGATGGAAAACCACAGAGCGAGACTCACTTTGTGGCACTTCATTCCTACGTGTCGTCAAATCCAGAGGATCTCAGTTTTCATCAAGGCGATACAATCACATTACTCTCGAGAAtAAACCAGGATTGGTTGGAAGGGCAATGTAATGGGAATACTGGTATATTTCCTGCATCCTTTGTGGAAGGAGTTCCTGTCAATGGGCAgtaattcaaataaataaatgtaaacacaaaagATATGAAAGCCAGTAATACAGTTAAGTATCCAAAGCTGAGAAGTGGTCAAGTTTCCCCTACTAAAACCATTTTAGAATCAACTCCATTTGATTAATCCGGgcctacatttttttaattaatgtatacatttttaaacatctttccattaaaataaatcacaatacATTTGGACAAGTGTGACAAGTTGTAAtgtttggacaaaaaaaaaagtcataagtttATAGATTCTGTGATTCAGTAA

Function

symbol description
ncf2 Predicted to enable superoxide-generating NADPH oxidase activator activity. Predicted to be involved in superoxide anion generation. Predicted to act upstream of or within phagocytosis and respiratory burst. Predicted to be part of NADPH oxidase complex. Predicted to be active in cytosol. Human ortholog(s) of this gene implicated in Alzheimer's disease; autosomal recessive chronic granulomatous disease cytochrome b-positive type II; and rheumatoid arthritis. Orthologous to human NCF2 (neutrophil cytosolic factor 2).

NR:

description
PREDICTED: neutrophil cytosol factor 2

GO: NA

KEGG:

id description
K08010 NCF2, P67PHOX; neutrophil cytosolic factor 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790545.1 True 1809 mRNA 0.43 15 8768220 8779822

Neighbor

gene id symbol gene type direction distance location
LOC120552044 anks6 coding downstream 33401 8724449 ~ 8734819 (-)
LOC120552041 ahrr coding downstream 55467 8639541 ~ 8712753 (-)
snx16 snx16 coding downstream 270206 8476127 ~ 8498014 (-)
LOC120552161 wwp1 coding downstream 350232 8378019 ~ 8417988 (-)
LOC120552414 LOC101468454,LOC102290369,LOC102196333,LOC103482264,LOC106914574 coding downstream 395883 8363474 ~ 8372337 (-)
olfm3a olfm3,LOC103369880,LOC108250954 coding upstream 249301 9029123 ~ 9083108 (-)
col11a1a col11a1,LOC103148006 coding upstream 307329 9087151 ~ 9173024 (-)
LOC120552183 vav3,LOC102780841 coding upstream 835018 9614840 ~ 9726073 (-)
nrros NA coding upstream 987770 9767592 ~ 9777716 (-)
fbxo45 fbxo45,LOC103356146 coding upstream 1006357 9786179 ~ 9790167 (-)
G218571 LOC102785356,LOC102298937,LOC101486668,LOC102080962,LOC102192826 non-coding downstream 13359 8753511 ~ 8754861 (-)
G218568 NA non-coding downstream 17768 8749593 ~ 8750452 (-)
G218563 NA non-coding downstream 23911 8743847 ~ 8744309 (-)
G218561 NA non-coding downstream 28318 8737144 ~ 8739902 (-)
G218522 NA non-coding downstream 133535 8634100 ~ 8634685 (-)
G218587 NA non-coding upstream 10006 8789828 ~ 8791965 (-)
G218588 NA non-coding upstream 16675 8796497 ~ 8796699 (-)
G218614 NA non-coding upstream 93130 8872952 ~ 8873160 (-)
G218639 NA non-coding upstream 160074 8939896 ~ 8940729 (-)
G218640 abca4,LOC103369882 non-coding upstream 168398 8948220 ~ 8949087 (-)
G218471 NA other downstream 337290 8430464 ~ 8430930 (-)
G218453 adarb2 other downstream 572341 8194929 ~ 8195879 (-)
G218085 LOC107687935 other downstream 3067644 5700229 ~ 5700576 (-)
G218019 NA other downstream 3731516 5027505 ~ 5036704 (-)
G217837 NA other downstream 4826891 3936010 ~ 3941329 (-)
prkdc prkdc other upstream 17959 8797781 ~ 8851726 (-)
LOC120551928 LOC104943218,LOC103369878,LOC100710535,LOC102301415,LOC101469805 other upstream 177587 8957409 ~ 8970638 (-)
cngb3.1 LOC103363254,LOC102786718,LOC108428960,LOC104948783 other upstream 1053640 9833462 ~ 9848241 (-)
G218950 NA other upstream 1797577 10577399 ~ 10669527 (-)
LOC120552013 NA other upstream 1824498 10604320 ~ 10615221 (-)

Expression


Co-expression Network