dph2 (dph2)


Basic Information

Item Value
gene id dph2
gene name dph2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 8763746 ~ 8768202 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790546.1
GTGCTTGTCATAGTAGCACTTTAACGTAATGTATTCTCTATTGCTGACACGTGTGTAGCTGTCAAAGAAGCGTTTATCCGTCAACAACTACACTTATAACATTGAATTGCACTGTTTCGTGTTTCCTATGTAATAATGGCTGACGCATTTAGCAGCAGCTCGGAAAGCGTAATTCAGCGTGTGGTAGACGTTACAGTGAAGACAAATACCCCTCTGGAAAAACTTGAAGAGTTGTATCAGATTAAGGAGACTTGCGACTTCATCAGAGAGCATCAATTTGAAAAGGTTGCACTGCAGTTTCCTGATGAGCTGCTGGTGGATTCAGTTGCAATAGCAGTGGAGATCGAGAGAAACAGTAATGCCAAGACGTTCATTTTGGGAGATACTTCCTATGGCAGTTGCTGCGTGGACGAGATAGCTGCAGAACATGTTGGAGCCGACTGCATTGTGCACTATGGCAGCGCTTGCCTCAGTCCGTCTAAAAGGCTGCCGTTGATGTACGTCTTTGAGCGGAGACCGGTGGATCTTGAGAAGTGCACTTCTGCCTTCAGAGAACTCTACCCGGACACACAGAGTCACATCGTCATCCTCTGTGACGTCAACTATGTTCATGCTATAGATGATCTTCTGACACTCCTTTCTCCAGAGTATCCTAACCTTGTCGTCTCAGAACTTGTTGTCGAAGGGGAGCAGTGTTACAGTCACGGCCGGGTTAAAAGAAAGCATGATGACACCTGTCTGTCGGAGCCAGACAGCAACCAGCGTATTTATCAGTTTGGAAGGCAATTCTCCTTGAGGAGTGGTTTAAACATCACTGattacagtatgttttatgttGGCCAAGAGGGAGCAACTCTGAGAAACTTCATGATGACTTGGAATCGCTGCTCATTTTGTTCTTTTGACCCCGTGAAAATGGCGGGGAGGACTGAGTCAGTAAGTATCAACCGTACACTGATGAAGCGTTATTACGCTATAGAAAGGGCCAAAGATGCCAACGTGGTTGGCATCCTGGTTGGCACACTGGGGATGGCTGACTACCTCCACATCATCCAGCAGTTGAAGGAGACCATCCGAGCAGCTGGCAAGAAGAGCTACATGTTTGCCATGGGGAAGCTGAACGTGCCCAAACTGGCAAACTTTCTCGAAATTGACATCTTTGTGTTAATTGCATGTCCTGAGAACTCACTGCTGGACTCAAGTGAGTTCTATAAACCTGTAGTAACACCGTTTGAGATGGAGGTGGCCTGCAACAAGAAGAGGGAGTGGTCAGAGGAATATGTCACAGACTTTCGACATCTCCTGCCAGGTGGACAGAGTCATGTGCCGTTGGCTGATCAGCAGGAGGAGGGCGATGAGACTGACGTGTCTTTGATCACAGGAGCTCTGCGAAGTTCCAGCCTGTTGAGCAGTGAGCCTGCCGTGTCCCCCTATGGCTCATCCCTGGTCCTCAGGAACCAGACACTCACTGTAGCCAACACCAACTCAGCTGCATCTTTCCTGGCAGAGCGAAGCTGGCGGGGCTTAGAGCAGAAGCTGGGAGAGACACCTGTTGTGAAGGCGGTACAGGGCAGGAGAGGCATAGCTATTGCCTATGAAGAAGAAGGAATGTCTCCATGATAATTTAACTCAACAGATAATTTCATCATATCTGCAGGTATTAAATGTATATTGCTTGTAATTACTGGAAGCTGTAAGTAataatgatacatttttattaaatcaatATCAGATATCA

Function

symbol description
dph2 Predicted to enable transferase activity. Predicted to be involved in peptidyl-diphthamide biosynthetic process from peptidyl-histidine. Is expressed in brain; immature eye; somite; and tail bud. Orthologous to human DPH2 (diphthamide biosynthesis 2).

NR:

description
2-(3-amino-3-carboxypropyl)histidine synthase subunit 2

GO:

id name namespace
GO:0017183 peptidyl-diphthamide biosynthetic process from peptidyl-histidine biological_process
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K17866 DPH2; diphthamide biosynthesis protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790546.1 True 1738 mRNA 0.47 7 8763746 8768202

Neighbor

gene id symbol gene type direction distance location
mcur1 LOC100707050 coding upstream 370 8756644 ~ 8763376 (+)
LOC120551930 LOC104929256,LOC103371642,LOC102298937 coding upstream 7993 8750920 ~ 8755753 (+)
zgc:56231 LOC103371641,LOC101074099 coding upstream 13290 8741089 ~ 8750456 (+)
rps20 rps20 coding upstream 23844 8737112 ~ 8739902 (+)
LOC120552752 NA coding upstream 25104 8738575 ~ 8738642 (+)
garem garem1 coding downstream 12204 8780406 ~ 8788701 (+)
arhgap29a LOC103374575,LOC104943220 coding downstream 105408 8873610 ~ 8912898 (+)
abca4a LOC100710805,LOC102195251 coding downstream 145062 8913264 ~ 8956540 (+)
prmt6 prmt6 coding downstream 692103 9460305 ~ 9463043 (+)
ntng1a ntng1,LOC102781425 coding downstream 708581 9476783 ~ 9591177 (+)
G218537 NA non-coding upstream 35532 8726772 ~ 8728214 (+)
LOC120552042 NA non-coding upstream 42678 8713303 ~ 8721068 (+)
G218528 NA non-coding upstream 101778 8661606 ~ 8661968 (+)
G218521 NA non-coding upstream 129098 8634100 ~ 8634648 (+)
G218449 NA non-coding upstream 142026 8621500 ~ 8621720 (+)
LOC120552459 NA non-coding downstream 3614 8771816 ~ 8775851 (+)
G218581 NA non-coding downstream 23138 8791340 ~ 8791961 (+)
G218589 NA non-coding downstream 28648 8796850 ~ 8797078 (+)
G218651 NA non-coding downstream 249404 9017606 ~ 9017845 (+)
G218660 NA non-coding downstream 321057 9089259 ~ 9092094 (+)
G218441 LOC101478037,LOC102216221,LOC100695799 other upstream 157168 8550783 ~ 8606578 (+)
LOC120552265 LOC101478037,LOC102216221,LOC100695799 other upstream 167390 8523299 ~ 8596356 (+)
G218445 NA other upstream 206493 8556216 ~ 8557253 (+)
LOC120552660 NA other upstream 1390399 7360606 ~ 7373347 (+)
trdmt1 LOC104946219,LOC101070638 other upstream 4241040 4511713 ~ 4522706 (+)
rnpc3 NA other downstream 443716 9211918 ~ 9230163 (+)
G218694 LOC106675555,LOC106675866,LOC106674541,LOC106099046 other downstream 608742 9376944 ~ 9378147 (+)
G218695 NA other downstream 689981 9458183 ~ 9458700 (+)
G218848 LOC103365363 other downstream 1654384 10422586 ~ 10423249 (+)
G218875 pabpn1 other downstream 1720065 10488267 ~ 10494988 (+)

Expression


Co-expression Network