garem (garem1)


Basic Information

Item Value
gene id garem
gene name garem1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 8780406 ~ 8788701 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790550.1
CCACAGACAGTTGCCCAGATGCACCCGTCGCGAGCTAAACAAACATGTCTCTGCTACATTATGAGACAACGGACCTTAATGATACGTAGGCCAATGGAAAGGGAAATGTGCCACGATTAATAAGAAACGTGCCGAACATAAAGCTGTTACGTTAGCTGATGGATAGTTGATTTAGCATTCCGTTGGTTAGCTTAGTGTAGCCTTTTGTGACCGTGTTTACACATTGCTAGCTAGCTCTCCAATTGGCTGCTGTAGCTAAGCTAGCAAAATGGACCTTGGAACAATGTTGTACAACAATTTAAAAGAAGTTACATGGAGCACGACGTCCTTACCATTAGATCAACTTGTCAGTGCTTATAGGTTGCCCCAAATTGCCAAGCTGGATAACGGTCAGTTGGTTGAAGGGCTTAGAGACCATGATTACCTCTTGATTCATTCCTGCCGTCAGTGGACGACTATTACTGCTCACAGTCTGGAGGAGGGACACTATGTCATCGGGCCCAAGATAGAGATCCCAGTGCATTACGAAGGTCAGTTTAAGCTATTGGAGCAGGACAGAGATGTCAAGGAGCCTGTGCAGTACTTCAACAGCGTGGAGGAGGTGGCTAAAGCATTCCCTGAAAGGGTATACGTCATGGAAGAAATCACTTTCAATGTTAAGATGGCTTCAGGGGAATGCAATGAAGATACTGAAGTTTACAACATTACCCTAAGCACCGGTGATGAGCTGACATTAATGGGCCAGGCTGAGATCCTGTATGCCAAGACCTCCAAGGAAAAATCCAGATTGAACACCATTTTTAAGAAGATTGGGAAGCTGAACTCCATCAGTAGGATCGGTCGAGGCAAGATGCCCTGCTTGATCTGCATGAACCATCGCACCAATGAGAGCATCAGCCTGCCTTTCCAGTGCAAAGGCAGGTTCAGCACCTGCAGTCCACTGGAGCTACAGATGCAGGACGGCGAGCACGTCATCAGGAACATTGTGGAGAAAACCCGCCTCCCGGTCAATGTCACCGTACCCAGCAGTCCGCCCCGCAACCAGCACGACCTGCACCTCATCCGCGAGGGTCATCGCTACAAATTGGTCAACATTCAGACGAAGACGGTGGTCGTGTGCTGCGTTCTGCGAAGCAACAAAATTATCCCCATCCATTTCCCCTTCCACATGGCCATGCCTAGATTCATTATTCCAGAAGAACTGCTGCAAGGAGAGTTGTGGCTAGACACTATGGTACATCGCTGGTTCTCCTTCTGCCAGGAGCAGTTTGACATAGACGACTATTCGCGAGCCGTCCGCGACGTTCGGACGGACTGGAACGACGACGGTAAGAGTCCTAAGAAGAGCAGCGGCAATGTCAGTTGCAGCGGAAGCAGCGgaggcagcagcagctccaACGGTTGTCCCAGCCACATGCAGATTCCCAGCTCTTTAATTTACGCCCGGGATGAACTCACCCAGTCCTTCCACCgactgtctgtgtgcgtgtacgGCAGCAACCTGCACGGTAACAGCGAGGTCAACTTGCAGGGCTGTATGACACTGTGTGGAGACTGGGCTCTTCTGCCTTCTGACAGCATCCCTACAGACCCGGGAGAAAATGAACACTTTCCCCCCGAACCGATGGATAGCACCAACCAACAACCGTCCCTCACCAAGTTGGACATTCCCTATGAGGAGCTGTGGTTGGATCACTTGAGAGGTCAGATCCCCAAACCTTCTTTAAGTGAGGGGATTCGAGGCATCAACAATGGCTGTGGTACAACAGCAGCCCTGTCATACCCAGTCACTTGTCCTCTCGGCGCAACACCCAGTCCAGATGCGTCTCTTACTCCACCACCGGTTCCACCCAAGTCTGAAGCTGTGAAGGAAGAATGCCGTCTTTTGAATGCCCCACCGATTCCTCCACGAAGTTTGAAACAGATGCCATCGGTGCCCATCCTGGCTAAGCCACGGCAGCAAGAGACTCGGTCTCCAAGTCCAACCCTCTCCTATTATTCCTCTGGTCTCCACAACATTAGTGGAGCATCTGAGCAAGAGGCGGCCGACCCACAAGAGCAAAGCCCCGTGTGCTACCCCTGTAACTGGGGTCGCTCCACCAGCACTGAGCCAAATGCTGCGTTGCCCAGTGGTAGCCTGCCATCGGATGGGATGTCCTCCAGACTGTCTTGGCCAAACAACTTCAGCGGAGGAGAATCGCACAGCATGGAGGAATTTCTACCAGCCGGCTGTCGAAGTTACTACAGTTACCCCAGAAAAAGATCCCCGAGCACCCCAAAGACCTGTACATCCAGGCGCGTTGACTTTGACGGCCGAGAGCACGGTCACAGCAGTCAGGACCTCAGGTCGCAGAACGCCTCTCTGAATCCGTTCTGCACCAAATCTTCAAGCTACAATTCAGAAATGTACAGAGACAAGCCCCTCGAAGAATCAAACACTAAGCAGAGCCTCTCTTGCCCCATCTTACCGCCGAGAACACCCAAATCCAATGCCATAAAGAAGGGCACCGATTCACTGTCGGGGTCAGCCTGTGACAGTGAGCAGGAAACGTCAAATTGCCCACGTCTTCGGCACGAGCAGGGCACAAAAGAGATAACTAACTCATTAACTCCTAACTGTCCATCCCCATCTCCCACTGCACAGTGGCAGCCCCCGTCCAGTCTGGCTGGTCTTTCTATTGAAGAGGTGTCCAAATCTCTAAGGTTCATCGGCCTGCCAGATGACATCGTGTCTCTTTTTGTGTCTGAGAAGATCGACGGGAATTTACTGCTGCAGCTCACGGAGGAGATTTTGTCGGAGGACTTCAAGCTAAGCAAACTGCAGGTAAAGAAACTCATGCAGTTCATAAATGGGTGGAGACCCAAGGTCTAAATGACAGTATGTGACACTAAATTCTGTGATAAAGCAGAGAGTCATGCCTTCAGTCTATATGCAATGCACACCCAAGCCACAAAGAGTTTCTTTTTTGTATAATATGAATTTATTTCCTTGTTACTTTATTGTGGGGATAGTTGGGTAAATGGTCAGTTCCCAGCCAACCTAAAGTCTGTGACAGCTATTTACTAACTGCATGGAATCATTTGGCACTTTCATGAAGACATGTTCATGTCGGCTACTTAGTACCCTTTCTCCCGCagcctagctagctaaactAAGCTGTTAAACTAGTGTTCATGTTATCACACAAATCCTAATTTAAGCCAACAAATGTAAAGGAAAACACTGATGTGACAAAACATAATTAAGATTGGCTCATTCTGTCCTCAAAAGGGGAATATTACGAGTTTCTGCTCTTTCCGGGATTTTTCAAAGACCACAGTAAGGATGTACTATGGTATATGTTGCTTATTTaccatttttaaaaataaaacaatgtaaatgttttgCAGTGAATACACAATTGGACATTTGGCCAAAAATAAAGCTTGCATCCCAAGCTTGCAATTACCTGCAGTCAGTGACATACGATGCAGTCACCATTTTCACGAGGTCAGGGATGTGATAAAGAACGTTGCTGCAAGTGCATTTCTCAACGTCAATTTCATTTAAGTCAAGACCTGGCTACTGCTGACAAGTGCTAAGGTGTACTCTACCCCTTTTTAAAGCTcttcttaaaggtgctgtaagcaatgttgggtgacgtcacttcttgttgacattcaaagtattgtcaaacaaaacggaggctagcccTACCTCCTCCTTATCCCATCCCctcccttccgcgcactaaccccccaacccccacccccaaatccttct
>XM_039790551.1
CCACAGACAGTTGCCCAGATGCACCCGTCGCGAGCTAAACAAACATGTCTCTGCTACATTATGAGACAACGGACCTTAATGATACGTAGGCCAATGGAAAGGGAAATGTGCCACGATTAATAAGAAACGTGCCGAACATAAAGCTGTTACGTTAGCTGATGGATAGTTGATTTAGCATTCCGTTGGTTAGCTTAGTGTAGCCTTTTGTGACCGTGTTTACACATTGCTAGCTAGCTCTCCAATTGGCTGCTGTAGCTAAGCTAGCAAAATGGACCTTGGAACAATGTTGTACAACAATTTAAAAGAAGTTACATGGAGCACGACGTCCTTACCATTAGATCAACTTGTCAGTGCTTATAGGTTGCCCCAAATTGCCAAGCTGGATAACGGTCAGTTGGTTGAAGGGCTTAGAGACCATGATTACCTCTTGATTCATTCCTGCCGTCAGTGGACGACTATTACTGCTCACAGTCTGGAGGAGGGACACTATGTCATCGGGCCCAAGATAGAGATCCCAGTGCATTACGAAGGTCAGTTTAAGCTATTGGAGCAGGACAGAGATGTCAAGGAGCCTGTGCAGTACTTCAACAGCGTGGAGGAGGTGGCTAAAGCATTCCCTGAAAGGGTATACGTCATGGAAGAAATCACTTTCAATGTTAAGATGGCTTCAGGGGAATGCAATGAAGATACTGAAGTTTACAACATTACCCTAAGCACCGGTGATGAGCTGACATTAATGGGCCAGGCTGAGATCCTGTATGCCAAGACCTCCAAGGAAAAATCCAGATTGAACACCATTTTTAAGAAGATTGGGAAGCTGAACTCCATCAGTAGGATCGGTCGAGGCAAGATGCCCTGCTTGATCTGCATGAACCATCGCACCAATGAGAGCATCAGCCTGCCTTTCCAGTGCAAAGGCAGGTTCAGCACCTGCAGTCCACTGGAGCTACAGATGCAGGACGGCGAGCACGTCATCAGGAACATTGTGGAGAAAACCCGCCTCCCGGTCAATGTCACCGTACCCAGCAGTCCGCCCCGCAACCAGCACGACCTGCACCTCATCCGCGAGGGTCATCGCTACAAATTGGTCAACATTCAGACGAAGACGGTGGTCGTGTGCTGCGTTCTGCGAAGCAACAAAATTATCCCCATCCATTTCCCCTTCCACATGGCCATGCCTAGATTCATTATTCCAGAAGAACTGCTGCAAGGAGAGTTGTGGCTAGACACTATGGTACATCGCTGGTTCTCCTTCTGCCAGGAGCAGTTTGACATAGACGACTATTCGCGAGCCGTCCGCGACGTTCGGACGGACTGGAACGACGACGGTAAGAGTCCTAAGAAGAGCAGCGGCAATGTCAGTTGCAGCGGAAGCAGCGgaggcagcagcagctccaACGGTTGTCCCAGCCACATGCAGATTCCCAGCTCTTTAATTTACGCCCGGGATGAACTCACCCAGTCCTTCCACCgactgtctgtgtgcgtgtacgGCAGCAACCTGCACGGTAACAGCGAGGTCAACTTGCAGGGCTGTATGACACTGTGTGGAGACTGGGCTCTTCTGCCTTCTGACAGCATCCCTACAGACCCGGGAGAAAATGAACACTTTCCCCCCGAACCGATGGATAGCACCAACCAACAACCGTCCCTCACCAAGTTGGACATTCCCTATGAGGAGCTGTGGTTGGATCACTTGAGAGGTCAGATCCCCAAACCTTCTTTAAGTGAGGGGATTCGAGGCATCAACAATGGCTGTGGTACAACAGCAGCCCTGTCATACCCAGTCACTTGTCCTCTCGGCGCAACACCCAGTCCAGATGCGTCTCTTACTCCACCACCGGTTCCACCCAAGTCTGAAGCTGTGAAGGAAGAATGCCGTCTTTTGAATGCCCCACCGATTCCTCCACGAAGTTTGAAACAGATGCCATCGGTGCCCATCCTGGCTAAGCCACGGCAGCAAGAGACTCGGTCTCCAAGTCCAACCCTCTCCTATTATTCCTCTGGTCTCCACAACATTGGAGCATCTGAGCAAGAGGCGGCCGACCCACAAGAGCAAAGCCCCGTGTGCTACCCCTGTAACTGGGGTCGCTCCACCAGCACTGAGCCAAATGCTGCGTTGCCCAGTGGTAGCCTGCCATCGGATGGGATGTCCTCCAGACTGTCTTGGCCAAACAACTTCAGCGGAGGAGAATCGCACAGCATGGAGGAATTTCTACCAGCCGGCTGTCGAAGTTACTACAGTTACCCCAGAAAAAGATCCCCGAGCACCCCAAAGACCTGTACATCCAGGCGCGTTGACTTTGACGGCCGAGAGCACGGTCACAGCAGTCAGGACCTCAGGTCGCAGAACGCCTCTCTGAATCCGTTCTGCACCAAATCTTCAAGCTACAATTCAGAAATGTACAGAGACAAGCCCCTCGAAGAATCAAACACTAAGCAGAGCCTCTCTTGCCCCATCTTACCGCCGAGAACACCCAAATCCAATGCCATAAAGAAGGGCACCGATTCACTGTCGGGGTCAGCCTGTGACAGTGAGCAGGAAACGTCAAATTGCCCACGTCTTCGGCACGAGCAGGGCACAAAAGAGATAACTAACTCATTAACTCCTAACTGTCCATCCCCATCTCCCACTGCACAGTGGCAGCCCCCGTCCAGTCTGGCTGGTCTTTCTATTGAAGAGGTGTCCAAATCTCTAAGGTTCATCGGCCTGCCAGATGACATCGTGTCTCTTTTTGTGTCTGAGAAGATCGACGGGAATTTACTGCTGCAGCTCACGGAGGAGATTTTGTCGGAGGACTTCAAGCTAAGCAAACTGCAGGTAAAGAAACTCATGCAGTTCATAAATGGGTGGAGACCCAAGGTCTAAATGACAGTATGTGACACTAAATTCTGTGATAAAGCAGAGAGTCATGCCTTCAGTCTATATGCAATGCACACCCAAGCCACAAAGAGTTTCTTTTTTGTATAATATGAATTTATTTCCTTGTTACTTTATTGTGGGGATAGTTGGGTAAATGGTCAGTTCCCAGCCAACCTAAAGTCTGTGACAGCTATTTACTAACTGCATGGAATCATTTGGCACTTTCATGAAGACATGTTCATGTCGGCTACTTAGTACCCTTTCTCCCGCagcctagctagctaaactAAGCTGTTAAACTAGTGTTCATGTTATCACACAAATCCTAATTTAAGCCAACAAATGTAAAGGAAAACACTGATGTGACAAAACATAATTAAGATTGGCTCATTCTGTCCTCAAAAGGGGAATATTACGAGTTTCTGCTCTTTCCGGGATTTTTCAAAGACCACAGTAAGGATGTACTATGGTATATGTTGCTTATTTaccatttttaaaaataaaacaatgtaaatgttttgCAGTGAATACACAATTGGACATTTGGCCAAAAATAAAGCTTGCATCCCAAGCTTGCAATTACCTGCAGTCAGTGACATACGATGCAGTCACCATTTTCACGAGGTCAGGGATGTGATAAAGAACGTTGCTGCAAGTGCATTTCTCAACGTCAATTTCATTTAAGTCAAGACCTGGCTACTGCTGACAAGTGCTAAGGTGTACTCTACCCCTTTTTAAAGCTcttcttaaaggtgctgtaagcaatgttgggtgacgtcacttcttgttgacattcaaagtattgtcaaacaaaacggaggctagcccTACCTCCTCCTTATCCCATCCCctcccttccgcgcactaaccccccaacccccacccccaaatccttct

Function

symbol description
garem1 Enables proline-rich region binding activity. Involved in several processes, including cellular response to epidermal growth factor stimulus; epidermal growth factor receptor signaling pathway; and positive regulation of ERK1 and ERK2 cascade.

NR:

description
PREDICTED: GRB2-associated and regulator of MAPK protein isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790550.1 True 3763 mRNA 0.49 6 8780406 8788701
XM_039790551.1 False 3760 mRNA 0.49 6 8780406 8788701

Neighbor

gene id symbol gene type direction distance location
dph2 dph2 coding upstream 12204 8763746 ~ 8768202 (+)
mcur1 LOC100707050 coding upstream 17030 8756644 ~ 8763376 (+)
LOC120551930 LOC104929256,LOC103371642,LOC102298937 coding upstream 24653 8750920 ~ 8755753 (+)
zgc:56231 LOC103371641,LOC101074099 coding upstream 29950 8741089 ~ 8750456 (+)
rps20 rps20 coding upstream 40504 8737112 ~ 8739902 (+)
arhgap29a LOC103374575,LOC104943220 coding downstream 84909 8873610 ~ 8912898 (+)
abca4a LOC100710805,LOC102195251 coding downstream 124563 8913264 ~ 8956540 (+)
prmt6 prmt6 coding downstream 671604 9460305 ~ 9463043 (+)
ntng1a ntng1,LOC102781425 coding downstream 688082 9476783 ~ 9591177 (+)
LOC120552675 LOC103356150,LOC104955777,LOC102780560 coding downstream 948578 9737279 ~ 9745454 (+)
LOC120552459 NA non-coding upstream 4555 8771816 ~ 8775851 (+)
G218537 NA non-coding upstream 52192 8726772 ~ 8728214 (+)
LOC120552042 NA non-coding upstream 59338 8713303 ~ 8721068 (+)
G218528 NA non-coding upstream 118438 8661606 ~ 8661968 (+)
G218521 NA non-coding upstream 145758 8634100 ~ 8634648 (+)
G218581 NA non-coding downstream 2639 8791340 ~ 8791961 (+)
G218589 NA non-coding downstream 8149 8796850 ~ 8797078 (+)
G218651 NA non-coding downstream 228905 9017606 ~ 9017845 (+)
G218660 NA non-coding downstream 300558 9089259 ~ 9092094 (+)
G218662 NA non-coding downstream 307241 9095942 ~ 9105212 (+)
G218441 LOC101478037,LOC102216221,LOC100695799 other upstream 173828 8550783 ~ 8606578 (+)
LOC120552265 LOC101478037,LOC102216221,LOC100695799 other upstream 184050 8523299 ~ 8596356 (+)
G218445 NA other upstream 223153 8556216 ~ 8557253 (+)
LOC120552660 NA other upstream 1407059 7360606 ~ 7373347 (+)
trdmt1 LOC104946219,LOC101070638 other upstream 4257700 4511713 ~ 4522706 (+)
rnpc3 NA other downstream 423217 9211918 ~ 9230163 (+)
G218694 LOC106675555,LOC106675866,LOC106674541,LOC106099046 other downstream 588243 9376944 ~ 9378147 (+)
G218695 NA other downstream 669482 9458183 ~ 9458700 (+)
G218848 LOC103365363 other downstream 1633885 10422586 ~ 10423249 (+)
G218875 pabpn1 other downstream 1699566 10488267 ~ 10494988 (+)

Expression


Co-expression Network