XLOC_005016 (anxa11b)


Basic Information

Item Value
gene id XLOC_005016
gene name anxa11b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 48815988 ~ 48837308 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00009794
gtgtgtgtgtgtgttagtaaatATCTGTGTTGTTTAAACCCAGTTCAAATATGGACAACTCAACCATTAGGTTAAACATATAGAGTATACACAGAATATGTACAGGATATACGTGTACAGACCATAAGACAaacagaaagtgtgtgtgtgtgcgtgtgtgttgcgGATGTTGGCCACACCCACCGCCCTTTTACTTCCTCATTCACTCCAAACTCCCGATCTGCAATCTCACACATCACAGTGTCGGAGATGAGTTACCCCGGTTATCCTCCAGCAGGTGGCAGCTACCCGCCCGCATCCGGCCCATATCAGCAGCCGGCAGCCGGGTACCCTCCTCAGCCTGGAGCGTATCCCCCACAGGCCGGATACTACCCCCCGCAGCCCGGAGCCTTCCCCCCGCAGCCCGGAGCCTTCCCCCCGCAGCCAGGAGCCTTCCCTCCTGGAGCAGGATACCCTCCCCAGGCTGGCGGGTACCCAGCGGCCCCGGGTGGAGGATTCCCCCCGCAGGCTGGAGGATACCCCGCCGCTCAGCCCGGGGCATACCCTAACATGCCCGCTGCAGGTGGATGGGGGGGCCATCCCGGCTTTGGAGCTCCAGCCGGAGGCATGCCCCAGGGTTACCCAGGAGTCCCAGCACCAGGACAGCAGCCCATGCCGGCATATCCTGGAGCTCCAGTCCCGAACCCAGGCATGCCCGGGTATGGAGGAGGCGCCCCGACTGGACCAACTCCACCCGCTCCTGCTATCAACagGGGTTTTCGTGGGACCATAAAGGATTTTCCTGGTGCGGATCCTCTTCGAGATGTGGAGGTGTTGCGGAAAGCCATGAAGGGCTTCGGAACGGATGAAAACGCCATTATTGAGCTTCTGGGCAGTCGAAGCAACAAGCAGCGTGTGCCTTTGCTGGCGGCGTATAAAACCACCTACGGAAAGGATCTGGTTCGTGACCTGAAGTCAGAGCTGACGGGACACTTTGAGGAGTTGGTTCTGGCCATGCTTAAATCTCCTGCACAGTTTGATGCATCTGAGTGCAAGGAAGCCATATCAggTGCAGGAACAGACGAGGCCTGTCTGATAGAGATCCTGTCCTCTCGCAGCAATGCAGAGATTCAGGAGATCAACAGAATCTataaagcagagTACGGTAAATCTCTGGAGGATGCCATCAGCAATGACACTTCTGGACATTTCCGCCGCCTGCTCGTCTCTCTCTGCCAGggtaATCGTGACGAGAGAGAGACTGTGGACATCTCTCTGGCCAAGCAGGATGCTCAGAAACTCTACAGTGCTGGAGAGAATAAAGTGGGCACAGACGAGTCTCAGTTCAATGCCATTCTCTGTGCCCGCAGTAAACCTCACCTCAGACAGGtgttTCAGGAGTACCAGCAGATGTGCGGTCGGGACATCGAGAAGAGCATCTGCAGAGAGATGTCTGGAGACCTGGAGTCCGGCATGGTGGCAGTGGtgaaGTGCATTAAAAACACTCCTGCCTACTTTGCTGAACGCCTCCACAAGGCCATGCAGGGCGCAGGAACTAAAGACCGGACTCTGATCCGCATCATGGTTTCCCGCTCTGAGCTGGACATGCTGGACATCAGACAGGAGTACCTGCGGCTGTTCGGCAAATCCCTCTACACTCACATCTCTGGTGACACTTCTGGAGATTATAAGAAGCTGCTGCTGAAACTCTGCGGAGGAAGTGACTGAAGAGCAGGAGGACAGAGCCGTTTCCATGACGACTGGATATCTGACATCATATTAATATCACTCATTTATCGATATGTCAGATGTGTCATGTTAACTGATCCTGTAATCACACCTTTATTAAGTTCACAACCAAAATAGCATTTCATTTGTGCCTTAGACACGTACAGATAATAATATTGCAGTCTATATTTAGCCGTCTAACCTGACTATGCATGATATGTAGAGGATACAGCTGTCTTTTGTATTTGTGTGTACAGTACTGTCTTCAGATGCCAAAACCAAAACTGCAATCATCTCTTCTGTGAAAATCATCGTTCAGATGCCTTGGAAATATTACACTTGAAGTTCTGAAATGTTTCTTTATGTAAAGTGAGCTTTATATCTCTATGCAAGACAcaaatatatattgaattatgACAATCTTTATGAAGGTCTACGTGTGTAAATCTCACAGAAACGTCTCATAATTGACCCCAATATCAAGAGAAATCAAGAAATACTTTGCTTATAAAATGTAAATCCTATTTTAGGAATGTTTTTGGTTATATTATAGTTTTTTCATATTACAATTAGGCATTATTCATCCTTAATTTACATTAATGTATCTGGCTGTTTAATTTGTGCATGATTTATTAGTGGTAATTCTTAATAACTTTGCtggaaaaacatatatattttcttctttttatgcaacttaaattgtttttaatgtgCAAAAAAACTGTTTAAGTTGCATAAAAAGAAGTAATGCATAACATGTAATGCATATTAATGGTCGTAAAACAGGCTTAATTTTCatgcatgttttattattaaatgtttaataatattaataattctttgatttgctttatttgagtCTGGGGTGAGCTATGAGCAGTTTCAGTGAGGTTTGACCCTGATTATTATAGTGAATGTGCATCTCTGCAGCAGTAGAGGGCAGTGTACAGTGAGCAATCTTTCCTCatgataatcatcatcatcatcagtaatTAAACAGGAGGTTCAGCCTGTTCATCATCATGAAGACAGACAGCTCTAGTTTTCTAACATCTTCACTCTAACCTGTATTGTATAATAACTCGTGTCTGATTAATAAAGCACTCACAGCTCTTGCTTTAGTCTGCA
>TCONS_00009795
GCCACACCCACCGCCCTTTTACTTCCTCATTCACTCCAAACTCCCGATCTGCAATCTCACACATCACAacctgaaactcgcctacagcacttattcattgttgctcttatagttgtg
>TCONS_00009796
gtgtgtgtgtgtgtgtgtgtggttttctcCTGCAGAAACTCTACAGTGCTGGAGAGAATAAAGTGGGCACAGACGAGTCTCAGTTCAATGCCATTCTCTGTGCCCGCAGTAAACCTCACCTCAGACAGGtgttTCAGGAGTACCAGCAGATGTGCGGTCGGGACATCGAGAAGAGCATCTGCAGAGAGATGTCTGGAGACCTGGAGTCCGGCATGGTGGCAGTGGtgaaGTGCATTAAAAACACTCCTGCCTACTTTGCTGAACGCCTCCACAAGGCCATGCAGGGCGCAGGAACTAAAGACCGGACTCTGATCCGCATCATGGTTTCCCGCTCTGAGCTGGACATGCTGGACATCAGACAGGAGTACCTGCGGCTGTTCGGCAAATCCCTCTACACTCACATCTCTGGTGACACTTCTGGAGATTATAAGAAGCTGCTGCTGAAACTCTGCGGAGGAAGTGACTGAAGAGCAGGAGGACAGAGCCGTTTCCATGACGACTGGATATCTGACATCATATTAATATCACTCATTTATCGATATGTCAGATGTGTCATGTTAACTGATCCTGTAATCACACCTTTATTAAGTTCACAACCAAAATAGCATTTCATTTGTGCCTTAGACACGTACAGATAATAATATTGCAGTCTATATTTAGCCGTCTAACCTGACTATGCATGATATGTAGAGGATACAGCTGTCTTTTGTATTTGTGTGTACAGTACTGTCTTCAGATGCCAAAACCAAAACTGCAATCATCTCTTCTGTG

Function

symbol description
anxa11b Predicted to enable calcium ion binding activity. Predicted to be involved in cytokinetic process and phagocytosis. Predicted to be active in cytoplasm. Is expressed in several structures, including cardiovascular system; digestive system; immature eye; integument; and sensory system. Human ortholog(s) of this gene implicated in amyotrophic lateral sclerosis type 23. Orthologous to human ANXA11 (annexin A11).

GO:

id name namespace
GO:0006909 phagocytosis biological_process
GO:0032506 cytokinetic process biological_process
GO:0005737 cytoplasm cellular_component
GO:0005509 calcium ion binding molecular_function
GO:0005544 calcium-dependent phospholipid binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030707-5 Predicted to enable calcium ion binding activity. Predicted to be involved in cytokinetic process and phagocytosis. Predicted to be active in cytoplasm. Is expressed in several structures, including cardiovascular system; digestive system; immature eye; integument; and sensory system. Human ortholog(s) of this gene implicated in amyotrophic lateral sclerosis type 23. Orthologous to human ANXA11 (annexin A11).

Ensembl:

ensembl_id ENSDARG00000002632

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00009794 False 2835 mRNA 0.46 15 48815988 48837308
TCONS_00009795 False 117 processed_transcript 0.47 2 48816160 48825502
TCONS_00009796 True 771 lncRNA 0.47 5 48833049 48836484

Neighbor

gene id symbol gene type direction distance location
XLOC_005015 ppifb coding upstream 4863 48803098 ~ 48811125 (+)
XLOC_005014 zmiz1b coding upstream 15257 48784731 ~ 48800731 (+)
XLOC_005013 LO017648.1 coding upstream 48194 48744016 ~ 48767794 (+)
XLOC_005012 mmp21 coding upstream 118617 48683208 ~ 48697371 (+)
XLOC_005011 uros coding upstream 133237 48674381 ~ 48682751 (+)
XLOC_005017 dlg5b.1 coding downstream 3874 48841182 ~ 48887804 (+)
XLOC_005018 NA coding downstream 50613 48887921 ~ 48896104 (+)
XLOC_005019 lrit1b coding downstream 135607 48972915 ~ 48976282 (+)
XLOC_005020 chst3b coding downstream 168740 49006048 ~ 49012695 (+)
XLOC_005021 CABZ01075114.1 coding downstream 196415 49033723 ~ 49038796 (+)
XLOC_005010 NA non-coding upstream 151543 48662791 ~ 48664445 (+)
XLOC_005007 NA non-coding upstream 242785 48548094 ~ 48573203 (+)
XLOC_005005 NA non-coding upstream 395997 48414527 ~ 48419991 (+)
XLOC_005002 NA non-coding upstream 485094 48328866 ~ 48330894 (+)
XLOC_004992 NA non-coding upstream 1205658 47606871 ~ 47610330 (+)
XLOC_005022 NA non-coding downstream 223854 49061162 ~ 49062445 (+)
XLOC_005024 NA non-coding downstream 272947 49110255 ~ 49118403 (+)

Expression


Co-expression Network