LOC120552480 (LOC103356684)


Basic Information

Item Value
gene id LOC120552480
gene name LOC103356684
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 20747747 ~ 20758794 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790578.1
TGGGCTGAGTTAGCTAGCTTCGGAACCTCTACTACTGactataacgttagctagctagcttattggAACCACTACTACTTTTAACCTACACCGttaattGAACCTAACGTTACAATCTGTAACCAACGTTATCTGGGAATATAACATTATTCAACGTTACTCCTCATCCCTAACTTTAGTCCCCAATCAACATGAGTGATCCTTGGCAAGAGTGTATGGATCACTGTGTGGAGGTCACCAAAAAGGCTGGGAGGATGATCCGCGAGGCGCTCCAGAAAGACATCACCGTCATGCACAAGAGCTCACCAGTTGACCTGGTGACTGAGACGGACCAGAAAGTGGAACGGCTCATTATATCCTCCATCAAGGAAAAGTACCCCACTCATAGcttcatAGGCGAGGAGTCCGTAGCAGCAGGCGCTCCTAGTGTTCTAACTGACAGTCCCACGTGGATCATCGACCCTATTGATGGTACCACCAACTTTGTTCACAGGTTCCCATTTGTGTCTGTATCAATTGGCTTCACTGTGAAGAAAGAGATAGAGTTTGGGATTGTCTACAGCTGCATCGAGGACAAAATGTACACAGCACGGAAAGGGAAAGGGGCATTCTGCAACGGAGACCCGATTAAAGTGTCAGGACAAGAAGATATAAGCCAATCTCTGGTACTGACAGAAATGGGCTTCAGGAAGAATCCTGAGCATTTCAAAACAATGTTGGCCAACCTCAAGACCATCCTCACCATCCCGGTGCATGGTATCCGCTCCCCGGGCAGTGCAGCTGTCAACATGTGTTTGGTAGCGTGCGGATCGGCTGATGCGTACTACCACATGGGCATCCACTGCTGGGACATGGCTGCAGGGGCGGCGGTTGTTACTGAAGCTGGAGGAGTTATCATGGACATTTCAGGTGCACCGTTTGATCTGATGTCCCGGAGGCTGATCATCGCCAGCAGCAGAGCAATAGCAGAACGCATCGCTAAGGAGATAACAGAGTTTCACGTCGGGAGGGACGACACAGATGGCGAGTAAATTTCCATAATTTCCTCTACCAACTTTCAGTTATTAAATCACCTGACTGACTGCATTTACTGTAACAAGTCACAATGatgatgctgatgatgatgatataagAACCAAACCGATAAACTCACCTCTGAAGAACTATACTCTGAAGTTTGTTAGTCAGCCCTTAAGACTTTCAGCCTTCTTTCTGCTTTCTTTAAACGTCATTGTTGTGATTCTGTACTTTTATAGATTCAGACTTTTTATTCTGCTGTAACTCGATGATATTGCTTGTGATGAGGGTATTATGCCATGCGTGTCTGACTTTACACCTGTTTTTAGCCATTATTTATTCTTTATATTAGGACTGGGTGTAATGTCCAAAATCTTCAATCACGATCATTTGATATCTTGATAACGATATATATCACGagcatgttttctggtaattcaataaataaataaatagtccaTATGAAATGACCGCATGGTAAAGCCTATTTTTGTATACTCCCGTGTGAATTATATACTTCCAAGTATTTTCCCATTTTATTAGGAACTtcagtgcaaaatgaacataatCTGCAAGGATCCAAGCGTAAAGCGCTGTCCAAATGACGTAAATATTGCCGTTACGCCGTCCAGccgctgttttttatttttttattttatttttcgacCTATAGAAAAATACATACGATGGATCACGATACACATCGTCATATCCCCCAGGACTTAAACTAGGTCTCCACGCTAATGTTGGTgaaagtgttgacatatgaaagcatcaaacatgaatTTAAGATGCACAAAAGGAAGAAAGTCCCAAAAAAAATCCTGTCCAGGCATTTTTAATAAAGCCTTTTAATAAATAGGGCAAGACGTTAAAAATACCCCCAACGCGTGTCAGCTTGAGCCTTCCTCAGGGTGTAGTATGTGTATGAATTTTAGATAATTGAGATGCGAGTACATCCAGTTGTTCCTTGCACCCGTTTGCTCAGCCCCATTAAGTTGTGTACGGGATGCAGGAGTTTTCTACCTGGAcgttattgtaaacaaacattgtgattgggtCTATTGGGTAATTTTAGGAGCCGATATGTTCAGGTTTTGACCAATAGTATTTATTTTCCATGTATGGTTTTATCtttggttattgtatttagttatatttatttaatatttcatgTGTTGTTTACACAGTAAGTAAATGAATGTCAGGGCCATCACTATTTTGCACTATAGTCAATTGAGGAATATGTACACCAAATATTGTGTACATATAATTACTGTACTGTTTAATGttagtttgtttatttgtttgtgtgtgtgtttttctttttttttttttttttaatcaagtccAGATTTAAAATACCCTGATCTTCTTGAAAACATGTTAAGTGTTTTTAATATTAAGTATGTTTTGGATGTAATAAAGA
>XM_039790579.1
CTATAAACTGGCTAAAATTCAACAGAAGTCAGTTCAACTGGAGGAACCTAACGTTACAATCTGTAACCAACGTTATCTGGGAATATAACATTATTCAACGTTACTCCTCATCCCTAACTTTAGTCCCCAATCAACATGAGTGATCCTTGGCAAGAGTGTATGGATCACTGTGTGGAGGTCACCAAAAAGGCTGGGAGGATGATCCGCGAGGCGCTCCAGAAAGACATCACCGTCATGCACAAGAGCTCACCAGTTGACCTGGTGACTGAGACGGACCAGAAAGTGGAACGGCTCATTATATCCTCCATCAAGGAAAAGTACCCCACTCATAGcttcatAGGCGAGGAGTCCGTAGCAGCAGGCGCTCCTAGTGTTCTAACTGACAGTCCCACGTGGATCATCGACCCTATTGATGGTACCACCAACTTTGTTCACAGGTTCCCATTTGTGTCTGTATCAATTGGCTTCACTGTGAAGAAAGAGATAGAGTTTGGGATTGTCTACAGCTGCATCGAGGACAAAATGTACACAGCACGGAAAGGGAAAGGGGCATTCTGCAACGGAGACCCGATTAAAGTGTCAGGACAAGAAGATATAAGCCAATCTCTGGTACTGACAGAAATGGGCTTCAGGAAGAATCCTGAGCATTTCAAAACAATGTTGGCCAACCTCAAGACCATCCTCACCATCCCGGTGCATGGTATCCGCTCCCCGGGCAGTGCAGCTGTCAACATGTGTTTGGTAGCGTGCGGATCGGCTGATGCGTACTACCACATGGGCATCCACTGCTGGGACATGGCTGCAGGGGCGGCGGTTGTTACTGAAGCTGGAGGAGTTATCATGGACATTTCAGGTGCACCGTTTGATCTGATGTCCCGGAGGCTGATCATCGCCAGCAGCAGAGCAATAGCAGAACGCATCGCTAAGGAGATAACAGAGTTTCACGTCGGGAGGGACGACACAGATGGCGAGTAAATTTCCATAATTTCCTCTACCAACTTTCAGTTATTAAATCACCTGACTGACTGCATTTACTGTAACAAGTCACAATGatgatgctgatgatgatgatataagAACCAAACCGATAAACTCACCTCTGAAGAACTATACTCTGAAGTTTGTTAGTCAGCCCTTAAGACTTTCAGCCTTCTTTCTGCTTTCTTTAAACGTCATTGTTGTGATTCTGTACTTTTATAGATTCAGACTTTTTATTCTGCTGTAACTCGATGATATTGCTTGTGATGAGGGTATTATGCCATGCGTGTCTGACTTTACACCTGTTTTTAGCCATTATTTATTCTTTATATTAGGACTGGGTGTAATGTCCAAAATCTTCAATCACGATCATTTGATATCTTGATAACGATATATATCACGagcatgttttctggtaattcaataaataaataaatagtccaTATGAAATGACCGCATGGTAAAGCCTATTTTTGTATACTCCCGTGTGAATTATATACTTCCAAGTATTTTCCCATTTTATTAGGAACTtcagtgcaaaatgaacataatCTGCAAGGATCCAAGCGTAAAGCGCTGTCCAAATGACGTAAATATTGCCGTTACGCCGTCCAGccgctgttttttatttttttattttatttttcgacCTATAGAAAAATACATACGATGGATCACGATACACATCGTCATATCCCCCAGGACTTAAACTAGGTCTCCACGCTAATGTTGGTgaaagtgttgacatatgaaagcatcaaacatgaatTTAAGATGCACAAAAGGAAGAAAGTCCCAAAAAAAATCCTGTCCAGGCATTTTTAATAAAGCCTTTTAATAAATAGGGCAAGACGTTAAAAATACCCCCAACGCGTGTCAGCTTGAGCCTTCCTCAGGGTGTAGTATGTGTATGAATTTTAGATAATTGAGATGCGAGTACATCCAGTTGTTCCTTGCACCCGTTTGCTCAGCCCCATTAAGTTGTGTACGGGATGCAGGAGTTTTCTACCTGGAcgttattgtaaacaaacattgtgattgggtCTATTGGGTAATTTTAGGAGCCGATATGTTCAGGTTTTGACCAATAGTATTTATTTTCCATGTATGGTTTTATCtttggttattgtatttagttatatttatttaatatttcatgTGTTGTTTACACAGTAAGTAAATGAATGTCAGGGCCATCACTATTTTGCACTATAGTCAATTGAGGAATATGTACACCAAATATTGTGTACATATAATTACTGTACTGTTTAATGttagtttgtttatttgtttgtgtgtgtgtttttctttttttttttttttttaatcaagtccAGATTTAAAATACCCTGATCTTCTTGAAAACATGTTAAGTGTTTTTAATATTAAGTATGTTTTGGATGTAATAAAGA

Function

NR:

description
PREDICTED: inositol monophosphatase 1-like

GO: NA

KEGG:

id description
K01092 E3.1.3.25, IMPA, suhB; myo-inositol-1(or 4)-monophosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790578.1 True 2446 mRNA 0.40 9 20747747 20758745
XM_039790579.1 False 2390 mRNA 0.40 9 20747747 20758794

Neighbor

gene id symbol gene type direction distance location
LOC120551976 LOC100696589,LOC106947338,LOC106912688,LOC104946573,LOC103147557,LOC103456804 coding downstream 6354 20735026 ~ 20741393 (-)
LOC120552510 cdh7 coding downstream 15496 20572208 ~ 20732251 (-)
prpf4bb prpf4b coding downstream 557241 20179556 ~ 20190506 (-)
LOC120552713 dnajc13 coding downstream 692538 20020133 ~ 20055209 (-)
topbp1 topbp1 coding downstream 728758 20002456 ~ 20018989 (-)
zgc:111976 NA coding upstream 106049 20864843 ~ 20872952 (-)
pks1 NA coding upstream 533990 21292784 ~ 21300494 (-)
LOC120552199 yme1l1 coding upstream 544995 21303789 ~ 21312913 (-)
acbd5a NA coding upstream 562506 21321300 ~ 21329803 (-)
pdss1 pdss1 coding upstream 627846 21386640 ~ 21393616 (-)
G221385 NA non-coding downstream 179963 20567559 ~ 20567784 (-)
G221359 NA non-coding downstream 278294 20469146 ~ 20469453 (-)
G221287 tmx3,LOC102777948 non-coding downstream 485592 20168681 ~ 20262155 (-)
G221293 pxdc1,LOC104939983 non-coding downstream 534489 20207738 ~ 20213258 (-)
G221183 puf60 non-coding downstream 929632 19814070 ~ 19818115 (-)
G221415 NA non-coding upstream 3065 20761859 ~ 20762077 (-)
G221417 NA non-coding upstream 7805 20766599 ~ 20766961 (-)
G221433 NA non-coding upstream 37077 20795871 ~ 20821240 (-)
G221471 NA non-coding upstream 153692 20912486 ~ 20912751 (-)
G221472 NA non-coding upstream 201834 20960628 ~ 20960830 (-)
G221048 ankh other downstream 1420853 19315591 ~ 19326894 (-)
mettl4 mettl4 other downstream 1798252 18938913 ~ 18949495 (-)
LOC120552352 colec12,LOC102798044 other downstream 1936803 18772977 ~ 18810944 (-)
G220833 NA other downstream 2049777 18610236 ~ 18697970 (-)
si:ch73-174h16.4 LOC103364270,LOC104947970 other downstream 2263971 18426762 ~ 18483776 (-)
LOC120552536 fbxl7 other upstream 76384 20835178 ~ 20862688 (-)
rbis LOC101064519,LOC103367294,LOC102312013 other upstream 458886 21217680 ~ 21221667 (-)
tfr1b NA other upstream 1231223 21990017 ~ 22011086 (-)
LOC120552473 NA other upstream 1355588 22114382 ~ 22120611 (-)
smpx smpx other upstream 1443973 22202767 ~ 22218381 (-)

Expression


Co-expression Network