LOC120552547 (LOC104953016,LOC108234711)


Basic Information

Item Value
gene id LOC120552547
gene name LOC104953016,LOC108234711
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 3888618 ~ 3901023 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790688.1
gcctgtgtctctgtcttcacCCTGAGTGCAGAAAGTTGTGTTGGCCCTCAGAGGGCGGGGCTTCTGATGACTTCACTTCCCACTGAGGAAAAGATTAACAGACATggTCTTCCGTTACCTAGTGCAGGTGAGAATGAGCCGAGgcaaacaccagagcagaggaGCTGCGGGGAGGACAACAGGACAAACATGAACAGCTTCTCCAGGGATGTCCAGGTCCGGAGCATGGAGCAGACGGTGAAACATGCTGAGAAGTACCTGGGTGAGATCTGCTCGCTGCTGGCCTCCTACACCAGGAAGACAGCCAAGCTCAGAGACAAGGCAGACCTGCTGGTGGCTCAGCTCTATGACTTCTCCAGCagagaggaccccgagctccaGATCGGCCTGAAAAACCTGGCTGAAGACCTGGCCATGGTGCAGGACTACAGGCAGGCTCAGGTAGAAAGACTGGAGACGAGAGTTGTTGCTCCTCTAAAAGCCTATGGAGACATAGTCAAAAATAAAAGGGTAGATCTCAAGAAGTTCAGCACTGATCTGAACAAAGAGCTGAAGGAGTTGCAGAAACTGGAGAAAATTCGACTGAGGAACCCAGCAGATCTACAGAGCATTTCTCAGGCAGAAGTGAATGCTCAGAAGGCTTCCAACAAAGCCCAGCACAGCATCAGACAACTGGAGGAGACCATCACAGACTTCCAGAGACAGAAACTGGAGGATATCAAAATGATTTTCAAAGACTTCATCACAGTAGAGATGCTCTTCCATGCTAAGGCGCTGGAGGTCtacgcacacacataccacaACCTGGAGGCAATGGACATTCAGAAGGATCTGGAGCTGTTCAGTGGACGGATTAGAATGCCTGACACTCCAGATGGGCGCCTGGACACCCCTCTGACTGGCTACTCTTCCCCCCTCATGAGCCGCTACCCCGGTCCTCCTCTGGCCTCCCCCAGAGGCCAAAGCCTCAGGTCAACGCTACCCTCTACCACAGGCCCAAACCACAGACAACAACACAGCCAGTACCCAGACACAGTCAGGAGGGCTCGCAGCAACTTACAACGCCAGAGAGGCATGGAGGATGAAGAGCCGGATGGGGAAGAAGAGTATGAAGAAGTagatgaggaagaagaggaggagatttATGAATCAGAGATAGAAGAGGGTCAGCCCACCAGCAGGCAGTCTTATGCGGCTCAATACGCCCAGATGCGCAGATGGCAAAAGTAAAAGCCtatgcacaaaacacacatatgcatatacaCAGACCCAACTCCTTGTACACAATGCTGTGTCCATGTAGATGAtgtgtttaatccaggctgaaatatacagtatatagatatatatgtcAACTGTAGAGCTGTCATCCAGTCAGCACCTCATTTCCTTATTATTGTCACCATGTGCAGTCTTTAAAAGTATGTTTAaacaataataatgtaaaaCTGAACACACTGAAAATTTGGTTTTGCTCAAATATATTAGTAATTGCTCTATTTGCTTCTAATCTCGGCTGGAAAGGAGTCAGCACAGCGGAAAAAGGGTTCCCAAAAAAAACCTAGTGGATCAACGTACTATGATAATtatgtttcattttttaaaatgaCAAGTCTTTCAAGTTGGAGATGGGAAAGAAAAGTAACCTATAATGATTAAATGCTGTCTCGCAGGTAGACaacaataaatgcaacaaataatcatccagaggcctgtactacgaagcaagatttggcgttaacgaggtaacttcaggttcaac

Function

NR:

description
PREDICTED: protein FAM92B-like, partial

GO: NA

KEGG:

id description
K23868 FAM92; protein FAM92

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790688.1 True 1762 mRNA 0.48 10 3888618 3901023

Neighbor

gene id symbol gene type direction distance location
plag1 plag1,LOC102799649 coding downstream 196010 3669151 ~ 3692608 (-)
mos mos coding downstream 244068 3642390 ~ 3644550 (-)
trnar-ucu_66 NA coding downstream 265997 3622524 ~ 3622621 (-)
trnar-ucu_65 NA coding downstream 267011 3621510 ~ 3621607 (-)
trnar-ucu_64 NA coding downstream 267383 3621138 ~ 3621235 (-)
LOC120552072 LOC101479525,LOC102293327 coding upstream 106876 4007899 ~ 4050666 (-)
cubn cubn coding upstream 165771 4066794 ~ 4160555 (-)
LOC120552076 NA coding upstream 265054 4166077 ~ 4176543 (-)
neurod6a LOC107736131 coding upstream 292822 4193845 ~ 4197469 (-)
pde1ca pde1c,LOC105910890 coding upstream 377298 4278321 ~ 4306877 (-)
G217818 NA non-coding downstream 14984 3871733 ~ 3873634 (-)
G217817 NA non-coding downstream 44136 3844143 ~ 3844482 (-)
G217815 NA non-coding downstream 61565 3826554 ~ 3827053 (-)
G217799 NA non-coding downstream 161782 3726524 ~ 3726836 (-)
G217778 NA non-coding downstream 221702 3666645 ~ 3666916 (-)
G217828 NA non-coding upstream 3084 3904107 ~ 3904552 (-)
G217884 NA non-coding upstream 277673 4178696 ~ 4178918 (-)
G217905 NA non-coding upstream 361603 4262626 ~ 4262932 (-)
G217935 NA non-coding upstream 564960 4465983 ~ 4466440 (-)
G217960 NA non-coding upstream 664607 4565630 ~ 4566156 (-)
G217780 chchd7,LOC102799933 other downstream 184261 3692952 ~ 3704357 (-)
f3a NA other downstream 432574 3437802 ~ 3456044 (-)
LOC120552696 NA other downstream 544913 3315418 ~ 3343705 (-)
svila svil other downstream 752404 2988926 ~ 3136214 (-)
scospondin sspo,LOC104950179 other downstream 1469553 2214711 ~ 2419065 (-)
G217837 NA other upstream 34987 3936010 ~ 3941329 (-)
G218019 NA other upstream 1126482 5027505 ~ 5036704 (-)
G218085 LOC107687935 other upstream 1799206 5700229 ~ 5700576 (-)
G218453 adarb2 other upstream 4293906 8194929 ~ 8195879 (-)
G218471 NA other upstream 4529441 8430464 ~ 8430930 (-)

Expression


Co-expression Network