cpb1 (cpb1)


Basic Information

Item Value
gene id cpb1
gene name cpb1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 16979924 ~ 16987685 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790696.1
GTTGCTGCATTACAGACGAGGATTGGTAGATGGGCAGCAGGTCGGGGTTATAAGAGCTGTCAAACGGTGAGTTcagcttcacagacaacatgAGGGCCCTCCTGCTTCTCGGATTGGTGGCTGTTGCCCTGGCTGAATTCACTCACTTCGAAGGAGAGAAAGTCTTCCGTCTGAAGCCTGTACTTGATGAGCATGTGACCCTCATTAAGGACCTGGCTAAGAGCATCGAGGTTGACTTCTGGAGACCCGAGAGCCCTGAGCTGGTGACCATCGACATCGATGTGGACATCCGTGTGCCTGCCATGTACCTGGATATGGTGTACACCACCCTGCAGCAGAATGATATGGAGTACAGGGTCCTCATTGAGGATGTGCAGTCTTCTGTTGATGCTCAGGTTGATAACAAGCCCTCTCCCAGAGCCCACAGCTACACCAAGTACAACACCTGGGATACTGTCCAGTCCTGGATTGCCTCCATTTCCTCCTCCAATCCTAATCTGATTAGCAAGCAGGTGATTGGAAGCACCTACGAGGGACGCCCCATGACTGTTCTCAAGCTCGGTAAGAAGTCCAGCTCCACCAAGCCTGCTATCTTCATGGATTGTGGTATTCACGCTAGAGAGTGGATCTCTCCTGCTTTCTGCCAGTGGTTCGTCAAGGAGGCTCTGTCCACCTATGGCAGTGATTCTCAGATGACCAGCCTGCTCGACCAGATGGATGTATTTGTTCTGCCTGTCTTTAACATTGATGGCTACGACTACACCCACAAGAGCAACAGGATGTGGAGGAAGACTCGCTCCAGGAAATCTGGATCCAGCTGCATTGGTGCCGATCCCAACAGGAACTGGAACGCTGGCTGGTGCACCACTGGGGCCTCCAGCAACCCCTGCAGCGACACCTTCTGTGGGTACAGTCCTGAGTCTGAGATCGAGGTCAAGAACGTTGCCGACTTCATCCGCAGGAACAAGTCCGTCCTCAAGGCCTACCTAACCATCCACTCCTACTCCCAGCTGCTGCTCTTCCCCTATTCCTACACCTTTGAGCTGGCTGCACACCACAGTGAGCTGCTGAAGGTTGCTGAGGGAGCTTCTGCTGCTCTGCGTAGTCTGTATGGTACCAGCTACACCAGTGGACCCGGTGCTGCAACCATCTACCCCGCTGCTGGAGGCTCTGACGACTGGGCCTACGACCTGGGAGTAAAGTATTCCTACACCTTTGAGTTGCGTGACACTGGTCGTTATGGCTTCCTGCTGCCCGAGTCTCAGATCAAGCCCACATGCGAGGAGACCATGCTGGCCGTCAAGTACATCGCCGCCTACGTGCAGAAGAACCTCTATTAAAGAGCGGAACTGCCAGGACCCCTGCCAACTCAGCTCCTCTACACCAGCCCCCAGCCCCTCCAACCTCTCAGCCATCTCCAGCCTGTATCCATGGATACAGGCACCACCCGCCATGTTTCCTCGCTGTGCTTGACAGAATGTCAAGATGAGTGCAAACAATAAAATCAATGATCCATCCCCACA

Function

symbol description
cpb1 Predicted to enable metallocarboxypeptidase activity. Acts upstream of or within cellular response to xenobiotic stimulus. Predicted to be active in extracellular space. Is expressed in liver. Orthologous to several human genes including CPB1 (carboxypeptidase B1).

NR:

description
Carboxypeptidase B precursor

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004181 metallocarboxypeptidase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K01291 CPB1; carboxypeptidase B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790696.1 True 1523 mRNA 0.54 11 16979924 16987685

Neighbor

gene id symbol gene type direction distance location
gyg1b gyg1 coding downstream 2243 16966645 ~ 16977681 (-)
bdh1 bdh1,LOC103373205,LOC107382809 coding downstream 14185 16950655 ~ 16965739 (-)
LOC120552381 LOC104957866 coding downstream 98200 16879495 ~ 16881724 (-)
plcd1a NA coding downstream 358243 16601629 ~ 16621681 (-)
LOC120551893 LOC103377216,LOC107591252,LOC101472906,LOC100709944 coding downstream 445126 16527664 ~ 16534798 (-)
agtr1b agtr1 coding upstream 124 16987809 ~ 16994577 (-)
zic1 zic1 coding upstream 108566 17096251 ~ 17099679 (-)
dipk2ab LOC104937275,LOC103365306 coding upstream 430944 17418629 ~ 17446009 (-)
chst2b chst2 coding upstream 525099 17512784 ~ 17516181 (-)
pcolce2b pcolce2 coding upstream 545381 17533066 ~ 17542989 (-)
G220445 NA non-coding downstream 81387 16898189 ~ 16898537 (-)
G220443 NA non-coding downstream 91900 16887256 ~ 16888024 (-)
G220382 NA non-coding downstream 234512 16742287 ~ 16745412 (-)
G220373 NA non-coding downstream 278367 16694587 ~ 16701557 (-)
G220300 gars,LOC103369121 non-coding downstream 431200 16546928 ~ 16548724 (-)
LOC120551964 NA non-coding upstream 127545 17115230 ~ 17398235 (-)
G220488 NA non-coding upstream 210706 17198391 ~ 17201334 (-)
G220611 NA non-coding upstream 564075 17551760 ~ 17552963 (-)
G220665 NA non-coding upstream 922834 17910519 ~ 17910741 (-)
G220659 NA non-coding upstream 936886 17924571 ~ 17924957 (-)
G220412 csrnp1,LOC104937158,LOC102793366 other downstream 104624 16874649 ~ 16875300 (-)
LOC120552205 LOC100711537,LOC102295084,LOC108230444,LOC106948898,LOC103140410 other downstream 184800 16782072 ~ 16795124 (-)
drd3 drd3 other downstream 695189 16266303 ~ 16284735 (-)
G220124 NA other downstream 914703 16064670 ~ 16065221 (-)
G220117 usp12,LOC107701680,LOC107705210 other downstream 975160 16003879 ~ 16004764 (-)
si:ch73-174h16.4 LOC103364270,LOC104947970 other upstream 1439077 18426762 ~ 18483776 (-)
G220833 NA other upstream 1622551 18610236 ~ 18697970 (-)
LOC120552352 colec12,LOC102798044 other upstream 1785292 18772977 ~ 18810944 (-)
mettl4 mettl4 other upstream 1951228 18938913 ~ 18949495 (-)
G221048 ankh other upstream 2327906 19315591 ~ 19326894 (-)

Expression


Co-expression Network