rmc1 (clg3h18orf8,LOC104932202,LOC103368274,LOC101473408,LOC102288614,LOC103129440)


Basic Information

Item Value
gene id rmc1
gene name clg3h18orf8,LOC104932202,LOC103368274,LOC101473408,LOC102288614,LOC103129440
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 26323493 ~ 26345733 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790716.1
CAGGAACTGTAATAGCCGGCTGTTGAAGTGAACTGTTCCTGCACTGCTGCTGCGGAGTCTGTCAGGATTCTGAACTGAGAAATAAtccaatataataatataaaataatatcagTGACAGTGTGAGGATGAGCGAGGAACATTACCTGGAGCTGTGTGAGAACCCGGTGCAGTTTGAACATGCCTCCAGCGTCAACAACGTCTTCTTCGACGAGGCTAACAAACAGGTGTTTGCCGTGCGTTCAGGTGGAGCCACGGGGGTGGTGGTCAAAGGTCCGGACGACAAGAGCAGCGTTGCCTTCAGAATGGACGATAAAGGAGAAGTGAAGTGTATCAAGTTCTCCATCGGAAATAAGATCTTGGCAGTTCAGAGGACTTCGAAATCTGTGGACTTCATCAACTTCATACCCGACTATCCACACACAGAGTTCACCCAGGAATGCAAGACGAAGAACGCGAGTGTTTTGGGTTTCTGTTGGACCAACTGGAATGAGATCGTCTTCATCACAGATCAGGGAATAGAGTTCTACCAgGTGTTTCCAGACAAACGCAGTCTGAAGCTGCTGAAGAGTCAGAGCATCAACGTGAACTGGTACCAGTACTGTCCCGAGACCACCGTCATCCTGCTGTCCACCACCGTGCAGGGAAACATCCTGCAGCCCTTCGCCTTCAGGaaTGGAACCATGTGCAAGATGTCCAAGTTTGAGATCGAGCTGCCGGTCGTCCCCAAACCTGCCAAACTCAGCCTGTCGGAGAGGGACATCGCCATGGCAACCATtTACGGTCAGCTGTTTGTGATGTATCTGAAGCATCACTCAAGAACGGCCAACAGTCCCAGTGCAGAAGTGGTGCTCTATCACTTACCAagGGAGGGAGCGTGTAAGAAGACGCACGTGTTGAAGCTGAACACGACGGGGAAGTTTGCTCTGAACATCGTGGACAACCTGGTGGTGGTTCATCACCAGAGCACCCAGacGTCTCTGATTTTCGACATCAAGCTGAAAGAACCAGATACTGCCGTGAACATGCACCAACCTGTCCTACCTGCCCGATCCATACACCCCTACAGGATACCGCtggcaggtccAGCAGTCGTTCCCTCTCAGCCTCCTGTACCATGTCAGCTCTACTCTTCCTCCTGGAGCGTTTTCCAACCCGACATCATCATCAGTGCCAGTGAAGGTTACCTGTGGTACTTGCAGGTGAAGTTGCCTCCGGCTGTCAACCTGCTGCAAGACAAAGGCAAACTGATGGACTTCCTGTTACGACGGAGAGACTGCAAGATGGtcatcctgtctgtctgctcacaGATTCTGGAGGGCGGGGAGAAGGGAAGTCTTCCTGTCGTGGCGACTGTCTTTGACAAACTGAACCAGGTGTATAAAGAATACCTGGAGGCAGAGCAGACCTACACCGCGGCGATGGAGTCCGGGCCGAGTCGAGGCAGCGCAGCACACAAACGTCCAGTCAGAACGCAGGCGGTCATCGACCAATCAGACATGTACACGCACGTCCTGTCATCCTTCACAGAGAGGAAGgGTGTCTCCCATAAATTCATCATCGCCGTGCTGATGGAGTATATCCGCTCTCTGAACCAGTTCCAGATCACCGTGCAGCATTACCTGTATGAGTTGGTGATAAAGACGTTGGTGCAGCACAACCTCTTCTACATGCTGCACCAGTTCCTGCAGTATCACGTCCTCAGCGACTCCAAACCACTGGCGTGTTTGCTTCTGTCTCTGGAGAGTACGTACCCTCCTGCACACCAGCTGTCACTGGACATGTTGAAgcgtCTGTCCACGGCCAACGATGAGATCGTGGAGGTTCTGCTGTCGAAGCAGCAGGTTCTGGGTGCGCTCAGATTCATCCGCAGTGTCGGTGGCCATGACAACGTGTCATCCAGGAAGTTTTTGGACGCAGCGCGGCAGACCGGAGACCAGATGTTGTTCTACACCGTGTTCAGGTCGTTCCAGCAGAGAAACCAGCGGCTGAGAGGGAGTCCCAGCTTCAACCCCGGAGAGCACTGTGAGGAGCATGTGGTTCACTTCAAGCAGCTGTTTGGGGATCAGGCTCTGATGAAACCCTCCACTGTGTGAACCTCCTAGGACCAAAACCCTCAGACTGTAAACTTGCCTGGGTCGGACTGCCTCTCCACCTGTTTAGACACACAGGAAGATCAAGAGAAGACCAATCAACATGGAGAACAGATCATCATGGGTTACATGCACACTCGTAAATCATTTCTATTATCCTGTTTCATGTTTGCACAAATAAACATCATATCCTGGTCATATAGTGAGACATGGACCTGATCCAGGTCTCTGACGCATGCAGTGGGTCATCAGTAAGAAAATCATACAATAAATAATTAAGTCTAATTGACTTATTTATGTAGAACACAAGATTTCCGAAACTTAATTTGAGTTGATGGAGTATCGGTATtattatcagtccctccagaaaaacgcgatcaaatttttttaaatatgccgcactttcgccgcataaattgccgattttcacgcaaaatatgcgggg

Function

NR:

description
uncharacterized protein C18orf8-like isoform X1

GO: NA

KEGG:

id description
K24763 RMC1; regulator of MON1-CCZ1 complex

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790716.1 True 2537 mRNA 0.50 21 26323493 26345733

Neighbor

gene id symbol gene type direction distance location
si:ch211-230g15.5 LOC103369797,LOC102301809,LOC102203330,LOC100701790 coding downstream 175470 26110407 ~ 26148023 (-)
cldn11b cldn11,LOC104933881,LOC104940783 coding downstream 213466 26100888 ~ 26110027 (-)
lrrc34 NA coding downstream 510710 25797285 ~ 25812783 (-)
klhl15 klhl15 coding downstream 558181 25742577 ~ 25765312 (-)
acot9.1 acot9 coding downstream 616850 25684062 ~ 25706643 (-)
riok3 riok3 coding upstream 6898 26352631 ~ 26375762 (-)
trnai-aau_30 NA coding upstream 101953 26447686 ~ 26447759 (-)
trnai-aau_31 NA coding upstream 104110 26449843 ~ 26449916 (-)
trnai-aau_32 NA coding upstream 120704 26466437 ~ 26466510 (-)
trnai-aau_33 NA coding upstream 121414 26467147 ~ 26467220 (-)
G223371 NA non-coding downstream 216506 26106712 ~ 26106987 (-)
G223348 NA non-coding downstream 236813 26026105 ~ 26086680 (-)
G223363 rpl22l1 non-coding downstream 249551 26071089 ~ 26073942 (-)
G223354 NA non-coding downstream 287692 26035415 ~ 26035801 (-)
G223347 NA non-coding downstream 299998 26022960 ~ 26023495 (-)
G223449 NA non-coding upstream 87576 26433309 ~ 26494229 (-)
G223455 NA non-coding upstream 115593 26461326 ~ 26463045 (-)
G223436 NA non-coding upstream 122689 26468422 ~ 26470795 (-)
G223464 NA non-coding upstream 209120 26554853 ~ 26558519 (-)
G223471 NA non-coding upstream 247308 26593041 ~ 26658273 (-)
G223395 cul1,LOC107713664 other downstream 105169 26216885 ~ 26218324 (-)
G223350 NA other downstream 193371 26059997 ~ 26130122 (-)
G223351 NA other downstream 264431 26054519 ~ 26059062 (-)
G223328 NA other downstream 280629 25981460 ~ 26042864 (-)
G223331 LOC101483661,LOC101069443,LOC103355338,LOC108249550 other downstream 325561 25983594 ~ 25997932 (-)
G223433 NA other upstream 58268 26404001 ~ 26409357 (-)
G223435 NA other upstream 125971 26471704 ~ 26475911 (-)
LOC120552560 NA other upstream 138196 26483929 ~ 26510127 (-)
LOC120552733 LOC100703031,LOC102297688,LOC106527684,LOC106916028,LOC104953541,LOC106590371,LOC101467375 other upstream 213702 26559435 ~ 26906332 (-)
G223516 LOC107098890,LOC106903449,LOC105416179,LOC103369801,LOC107756860,LOC108228419 other upstream 758865 27104598 ~ 27188218 (-)

Expression


Co-expression Network